Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
4. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
5. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
6. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
7. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
12. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
13. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
14. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
15. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
16. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
17. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
18. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
19. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
20. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
21. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
22. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. ENSGALG00000012391 ENSGALG00000012391 0 0.768 - - - - - - - 0.768 - -
27. HPGD ENSGALG00000010769 5 0.768 - - - - - - - 0.768 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
28. CLDN15 ENSGALG00000038964 21 0.768 - - - - - - - 0.768 - - claudin 15, transcript variant X4
29. SH3GL3 ENSGALG00000006045 12 0.768 - - - - - - - 0.768 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
30. IL12RB1 28 0.768 - - - - - - - 0.768 - - interleukin 12 receptor subunit beta 1, transcript variant X4
31. CCNT2 ENSGALG00000012207 14 0.768 - - - - - - - 0.768 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
32. GRM3 ENSGALG00000006576 474 0.768 - - - - - - - 0.768 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
33. CLVS1 ENSGALG00000043172 56 0.768 - - - - - - - 0.768 - - clavesin 1
34. TMEM204 ENSGALG00000029047 8 0.768 - - - - - - - 0.768 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
35. TNIP2 ENSGALG00000015666 28 0.768 - - - - - - - 0.768 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
36. CERKL ENSGALG00000008910 70 0.768 - - - - - - - 0.768 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
37. SCG5 ENSGALG00000009725 10 0.768 - - - - - - - 0.768 - - secretogranin V [Source:NCBI gene;Acc:769742]
38. PICALM ENSGALG00000039037 57 0.768 - - - - - - - 0.768 - - phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
39. MMP27 ENSGALG00000019060 19 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
40. FRMD4A ENSGALG00000034992 6 0.768 - - - - - - - 0.768 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
41. RBL2 ENSGALG00000003663 10 0.768 - - - - - - - 0.768 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
42. DDTNFR23 ENSGALG00000006407 4 0.768 - - - - - - - 0.768 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
43. LRP6 ENSGALG00000031503 39 0.768 - - - - - - - 0.768 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
44. CUBN ENSGALG00000008704 21 0.768 - - - - - - - 0.768 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
45. RBM43 ENSGALG00000012479 5 0.768 - - - - - - - 0.768 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
46. STMN2 ENSGALG00000039690 989 0.768 - - - - - - - 0.768 - - stathmin 2 [Source:NCBI gene;Acc:396095]
47. MYO1D ENSGALG00000000674 14 0.768 - - - - - - - 0.768 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
48. CREB3L1 ENSGALG00000008393 3 0.768 - - - - - - - 0.768 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
49. LOC100857820 ENSGALG00000001824 16 0.768 - - - - - - - 0.768 - - uncharacterized LOC100857820
50. ENSGALG00000026925 ENSGALG00000026925 119 0.768 - - - - - - - 0.768 - -
51. ING1 ENSGALG00000016849 89 0.768 - - - - - - - 0.768 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
52. RASSF6 ENSGALG00000011664 7 0.768 - - - - - - - 0.768 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
53. MEIOB ENSGALG00000005411 6 0.768 - - - - - - - 0.768 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
54. LAMC1 ENSGALG00000004620 11 0.768 - - - - - - - 0.768 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
55. TIMP4 ENSGALG00000004969 21 0.768 - - - - - - - 0.768 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
56. ENSGALG00000019602 ENSGALG00000019602 2 0.768 - - - - - - - 0.768 - -
57. UPK3B 4 0.768 - - - - - - - 0.768 - - uroplakin 3B
58. KCNK16 ENSGALG00000020049 0 0.768 - - - - - - - 0.768 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
59. LRCH1 ENSGALG00000016990 17 0.768 - - - - - - - 0.768 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
60. C1H7ORF60 C1H7ORF60 3 0.768 - - - - - - - 0.768 - -
61. DNAH14 ENSGALG00000045078 1 0.768 - - - - - - - 0.768 - - dynein, axonemal, heavy chain 14
62. SEC16B ENSGALG00000004424 4 0.768 - - - - - - - 0.768 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
63. COG3 ENSGALG00000016980 15 0.768 - - - - - - - 0.768 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
64. ENSGALG00000028737 ENSGALG00000028737 24 0.768 - - - - - - - 0.768 - -
65. PAPPA ENSGALG00000007079 6 0.768 - - - - - - - 0.768 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
66. NME8 ENSGALG00000029677 2 0.768 - - - - - - - 0.768 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
67. SLC39A12 ENSGALG00000008602 6 0.768 - - - - - - - 0.768 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
68. CFTII CFTII 6 0.768 - - - - - - - 0.768 - -
69. ENSGALG00000001138 ENSGALG00000001138 21 0.768 - - - - - - - 0.768 - -
70. ACKR2 ENSGALG00000005305 0 0.768 - - - - - - - 0.768 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
71. ENSGALG00000029127 ENSGALG00000029127 2 0.768 - - - - - - - 0.768 - -
72. TERF2IP ENSGALG00000000903 41 0.768 - - - - - - - 0.768 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
73. ADAMTS8 ENSGALG00000001370 0 0.768 - - - - - - - 0.768 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
74. LOC395991 ENSGALG00000006944 103 0.768 - - - - - - - 0.768 - - crescent, transcript variant X1
75. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
76. RBKS ENSGALG00000010043 3 0.768 - - - - - - - 0.768 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
77. RAI1 ENSGALG00000004888 14 0.768 - - - - - - - 0.768 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
78. TNMD ENSGALG00000006821 19 0.768 - - - - - - - 0.768 - - tenomodulin [Source:NCBI gene;Acc:404530]
79. HLCS ENSGALG00000016047 30 0.768 - - - - - - - 0.768 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
80. BTBD10 ENSGALG00000005369 56 0.768 - - - - - - - 0.768 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
81. SLC20A1 ENSGALG00000013740 40 0.768 - - - - - - - 0.768 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
82. SNORA26 SNORA26 3 0.768 - - - - - - - 0.768 - -
83. ATXN10 ENSGALG00000014234 16 0.768 - - - - - - - 0.768 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
84. CD40 ENSGALG00000007015 7 0.768 - - - - - - - 0.768 - - CD40 molecule [Source:NCBI gene;Acc:395385]
85. SLC6A20 ENSGALG00000039333 1 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
86. gga-mir-6569 ENSGALG00000026551 10 0.768 - - - - - - - 0.768 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
87. TANC2 26 0.768 - - - - - - - 0.768 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
88. SUSD5 ENSGALG00000042289 1 0.768 - - - - - - - 0.768 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
89. PHC2 62 0.768 - - - - - - - 0.768 - - polyhomeotic homolog 2
90. NMNAT3 ENSGALG00000026187 11 0.768 - - - - - - - 0.768 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
91. DMGDH ENSGALG00000004491 15 0.768 - - - - - - - 0.768 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
92. FLT4 ENSGALG00000005802 5 0.768 - - - - - - - 0.768 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
93. IL8 ENSGALG00000026098 16 0.768 - - - - - - - 0.768 - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
94. SPIDR SPIDR 19 0.768 - - - - - - - 0.768 - -
95. SPINK6 ENSGALG00000032567 3 0.768 - - - - - - - 0.768 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
96. PPP1R36 ENSGALG00000040026 24 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
97. DENND5A ENSGALG00000005840 54 0.768 - - - - - - - 0.768 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
98. PYROXD2 ENSGALG00000007014 14 0.768 - - - - - - - 0.768 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
99. TMSB10 TMSB10 518 0.768 - - - - - - - 0.768 - -
100. PEX5 ENSGALG00000014683 17 0.768 - - - - - - - 0.768 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA