Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA3D

Gene Name Gene ID Reads Annotation
SEMA3D ENSGALG00000006563 655 semaphorin 3D [Source:NCBI gene;Acc:396332]











Genes with expression patterns similar to SEMA3D

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEMA3D ENSGALG00000006563 655 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 semaphorin 3D [Source:NCBI gene;Acc:396332]
2. CAT-1 CAT-1 115 1.421 - - - - - - 0.711 - - 0.710
3. TGFB2 ENSGALG00000009612 10223 0.859 - - - - - - - - - 0.859 transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
4. CRISPLD2 ENSGALG00000032143 2122 0.856 - - - - - - - - - 0.856 cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]
5. ANXA2 ENSGALG00000003770 18252 0.847 - - - - - - - - - 0.847 annexin A2 [Source:NCBI gene;Acc:396297]
6. PITX2 ENSGALG00000042492 20419 0.842 - - - - - - - - - 0.842 paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
7. CDH2 ENSGALG00000015132 2848 0.829 - - - - - - - - - 0.829 cadherin 2 [Source:NCBI gene;Acc:414745]
8. FAM210A ENSGALG00000013887 1828 0.827 - - - - - - 0.827 - - - family with sequence similarity 210 member A [Source:NCBI gene;Acc:421045]
9. GATA5 ENSGALG00000005352 11876 0.82 - - - - - - - - - 0.820 GATA binding protein 5 [Source:NCBI gene;Acc:396391]
10. ZBTB10 ENSGALG00000034376 3271 0.814 - - - - - - 0.814 - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
11. CIDEC ENSGALG00000026945 718 0.808 - - - - - - - - - 0.808 cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
12. PKP2 ENSGALG00000012913 2547 0.805 - - - - - - - - - 0.805 plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
13. CCDC173 358 0.797 - - - - - - 0.797 - - - coiled-coil domain containing 173
14. CFC1 ENSGALG00000012623 3164 0.796 - - - - - - - - - 0.796 cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
15. PIBF1 ENSGALG00000016929 593 0.793 - - - - - - 0.793 - - - progesterone immunomodulatory binding factor 1 [Source:HGNC Symbol;Acc:HGNC:23352]
16. PERP2 ENSGALG00000027207 1240 0.791 - - - - - - - - - 0.791 PERP2, TP53 apoptosis effector [Source:NCBI gene;Acc:421682]
17. OGG1 ENSGALG00000006651 1320 0.791 - - - - - - 0.791 - - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
18. TTC38 ENSGALG00000014551 1135 0.79 - - - - - - 0.790 - - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
19. SHC4 245 0.788 - - - - - - 0.788 - - - SHC adaptor protein 4, transcript variant X1
20. SNX10 ENSGALG00000011046 333 0.788 - - - - - - 0.788 - - - sorting nexin 10 [Source:NCBI gene;Acc:420628]
21. EMC8 ENSGALG00000005744 9422 0.787 - - - - - - 0.787 - - - ER membrane protein complex subunit 8
22. ZFYVE16 ENSGALG00000015576 287 0.785 - - - - - - 0.785 - - - zinc finger FYVE-type containing 16, transcript variant X3
23. PCDH11X ENSGALG00000006851 314 0.78 - - - - - - 0.780 - - - protocadherin 11 X-linked, transcript variant X1
24. EPHA7 ENSGALG00000015593 1173 0.78 - - - - - - - - - 0.780 EPH receptor A7 [Source:NCBI gene;Acc:395967]
25. GALM ENSGALG00000013828 1546 0.78 - - - - - - 0.780 - - - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
26. MTIF3 ENSGALG00000017097 2524 0.779 - - - - - - 0.779 - - - mitochondrial translational initiation factor 3 [Source:NCBI gene;Acc:418930]
27. ENSGALG00000005578 ENSGALG00000005578 16 0.779 - - - - - - - - - 0.779
28. FIBIN ENSGALG00000023904 3350 0.778 - - - - - - - - - 0.778 fin bud initiation factor homolog [Source:NCBI gene;Acc:426933]
29. FRG1 ENSGALG00000013590 2590 0.776 - - - - - - 0.776 - - - FSHD region gene 1
30. FHL2 ENSGALG00000016797 11 0.771 - - - - - - - - - 0.771 four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
31. TIPARP ENSGALG00000010256 1825 0.766 - - - - - - 0.766 - - - TCDD inducible poly(ADP-ribose) polymerase [Source:HGNC Symbol;Acc:HGNC:23696]
32. CNN2 ENSGALG00000027777 512 0.766 - - - - - - - - - 0.766 calponin 2 [Source:NCBI gene;Acc:100216000]
33. C8orf34 ENSGALG00000034561 286 0.763 - - - - - - 0.763 - - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
34. MADD ENSGALG00000008181 2273 0.763 - - - - - - 0.763 - - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
35. PLK4 ENSGALG00000010195 514 0.762 - - - - - - 0.762 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
36. DBR1 ENSGALG00000043797 1896 0.761 - - - - - - 0.761 - - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
37. PDZD8 ENSGALG00000029095 1068 0.76 - - - - - - 0.760 - - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
38. SAP130 ENSGALG00000002070 9814 0.759 - - - - - - 0.759 - - - Sin3A associated protein 130 [Source:NCBI gene;Acc:424756]
39. SMARCD3 ENSGALG00000043137 401 0.758 - - - - - - 0.758 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
40. TDRD5 ENSGALG00000033634 40 0.758 - - - - - - - - - 0.758 tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
41. FANCA ENSGALG00000000516 250 0.757 - - - - - - 0.757 - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
42. TMEM65 ENSGALG00000037371 776 0.757 - - - - - - 0.757 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
43. SLC2A9 ENSGALG00000014971 751 0.753 - - - - - - 0.753 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
44. ENSGALG00000020995 ENSGALG00000020995 2144 0.751 - - - - - - 0.751 - - -
45. FAM69A ENSGALG00000005918 157 0.751 - - - - - - 0.751 - - - family with sequence similarity 69 member A, transcript variant X4
46. LIX1 ENSGALG00000015290 7589 0.747 - - - - - - - - - 0.747 limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
47. FOXRED1 ENSGALG00000046347 4176 0.747 - - - - - - 0.747 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
48. DEGS1 ENSGALG00000009330 3599 0.745 - - - - - - 0.745 - - - delta 4-desaturase, sphingolipid 1 [Source:NCBI gene;Acc:421327]
49. B4GALT4 ENSGALG00000015069 1315 0.745 - - - - - - 0.745 - - - beta-1,4-galactosyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:927]
50. ANAPC7 ENSGALG00000003826 5484 0.743 - - - - - - 0.743 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
51. ZFPM1 ENSGALG00000006099 97 0.742 - - - - - - - - - 0.742 zinc finger protein, FOG family member 1 [Source:HGNC Symbol;Acc:HGNC:19762]
52. AFG3L2 ENSGALG00000013853 1138 0.742 - - - - - - 0.742 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
53. TFB1M ENSGALG00000013647 84 0.74 - - - - - - 0.740 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
54. MDGA1 ENSGALG00000010145 13 0.739 - - - - - - - - - 0.739 MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]
55. SH2D5 ENSGALG00000044997 2 0.739 - - - - - - - - - 0.739 SH2 domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28819]
56. NTSR1 ENSGALG00000005524 2 0.739 - - - - - - - - - 0.739 neurotensin receptor 1 [Source:NCBI gene;Acc:428149]
57. LOC419074 ENSGALG00000017336 1885 0.739 - - - - - - 0.739 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
58. SERPINI1 ENSGALG00000009470 3819 0.739 - - - - - - 0.739 - - - serpin family I member 1 [Source:NCBI gene;Acc:425002]
59. ENSGALG00000019943 ENSGALG00000019943 6 0.739 - - - - - - - - - 0.739
60. DOK2 8 0.739 - - - - - - - - - 0.739 docking protein 2, transcript variant X2
61. FAM83G ENSGALG00000005087 3 0.739 - - - - - - - - - 0.739 family with sequence similarity 83 member G [Source:HGNC Symbol;Acc:HGNC:32554]
62. ZCCHC7 ENSGALG00000028675 3 0.739 - - - - - - - - - 0.739 zinc finger CCHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:26209]
63. KK34 ENSGALG00000037851 21 0.739 - - - - - - - - - 0.739 interleukin-like [Source:NCBI gene;Acc:407087]
64. SLC26A7 ENSGALG00000033638 14 0.739 - - - - - - - - - 0.739 solute carrier family 26 member 7 [Source:HGNC Symbol;Acc:HGNC:14467]
65. ACA64 ACA64 62 0.739 - - - - - - - - - 0.739
66. GSR ENSGALG00000037781 8043 0.737 - - - - - - 0.737 - - - glutathione-disulfide reductase [Source:HGNC Symbol;Acc:HGNC:4623]
67. TP73 ENSGALG00000001006 335 0.737 - - - - - - 0.737 - - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
68. OXCT1 ENSGALG00000014846 17 0.735 - - - - - - - - - 0.735 3-oxoacid CoA-transferase 1 [Source:NCBI gene;Acc:427190]
69. C10ORF58 C10ORF58 5045 0.735 - - - - - - 0.735 - - -
70. AADAT ENSGALG00000009655 1692 0.735 - - - - - - 0.735 - - - aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
71. C12H3ORF19 C12H3ORF19 1278 0.735 - - - - - - 0.735 - - -
72. LYRM1 ENSGALG00000002273 1523 0.734 - - - - - - 0.734 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
73. ENSGALG00000011906 ENSGALG00000011906 181 0.734 - - - - - - - - - 0.734
74. CEP68 ENSGALG00000008787 1591 0.733 - - - - - - 0.733 - - - centrosomal protein 68 [Source:HGNC Symbol;Acc:HGNC:29076]
75. ODZ1 ODZ1 124 0.732 - - - - - - - - - 0.732
76. HRASLS ENSGALG00000007193 356 0.732 - - - - - - - - - 0.732 HRAS like suppressor [Source:HGNC Symbol;Acc:HGNC:14922]
77. GAS8 ENSGALG00000000540 2207 0.732 - - - - - 0.732 - - - - growth arrest specific 8 [Source:NCBI gene;Acc:415858]
78. SCTR ENSGALG00000012106 49 0.732 - - - - - - 0.732 - - - secretin receptor [Source:NCBI gene;Acc:770943]
79. PPP2R3A ENSGALG00000034512 1091 0.731 - - - - - - 0.731 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
80. WSCD1 ENSGALG00000005886 539 0.731 - - - - - - 0.731 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
81. DLST ENSGALG00000010286 19 0.731 - - - - - - - - - 0.731 dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
82. FADS1 ENSGALG00000007127 5231 0.729 - - - - - - 0.729 - - - fatty acid desaturase 1
83. TYW5 ENSGALG00000008145 1691 0.729 - - - - - - 0.729 - - - tRNA-yW synthesizing protein 5 [Source:NCBI gene;Acc:424065]
84. gga-mir-1647 ENSGALG00000025382 4 0.728 - - - - - - - - - 0.728 gga-mir-1647 [Source:miRBase;Acc:MI0007379]
85. ARHGAP12 ENSGALG00000007254 479 0.728 - - - - - - 0.728 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
86. MCM8 ENSGALG00000009195 9 0.727 - - - - - - - - - 0.727 minichromosome maintenance 8 homologous recombination repair factor [Source:NCBI gene;Acc:421314]
87. ADCY5 ENSGALG00000031244 10 0.727 - - - - - - - - - 0.727 adenylate cyclase 5 [Source:NCBI gene;Acc:395340]
88. EIF2AK3 ENSGALG00000015958 850 0.727 - - - - - - - - - 0.727 eukaryotic translation initiation factor 2 alpha kinase 3 [Source:HGNC Symbol;Acc:HGNC:3255]
89. SLCO3A1 ENSGALG00000006871 1125 0.727 - - - - - - 0.727 - - - solute carrier organic anion transporter family member 3A1 [Source:HGNC Symbol;Acc:HGNC:10952]
90. KIAA1328 ENSGALG00000002419 162 0.726 - - - - - - - - - 0.726 KIAA1328 [Source:NCBI gene;Acc:426890]
91. SYT8 ENSGALG00000006602 369 0.725 - - - - - - 0.725 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
92. USP42 ENSGALG00000003378 1392 0.725 - - - - - - 0.725 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
93. BTD ENSGALG00000011216 566 0.725 - - - - - - - 0.725 - - biotinidase [Source:NCBI gene;Acc:420639]
94. MANF ENSGALG00000002362 7518 0.725 - - - - - - 0.725 - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
95. PHIP ENSGALG00000015889 2348 0.725 - - - - - - 0.725 - - - pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
96. MBD5 ENSGALG00000012449 27 0.725 - - - - - - - - - 0.725 methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
97. SLC16A14 ENSGALG00000002897 157 0.725 - - - - - - 0.725 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
98. TTC12 1384 0.724 - - - - - - 0.724 - - - tetratricopeptide repeat domain 12, transcript variant X4
99. ENSGALG00000003817 ENSGALG00000003817 45 0.724 - - - - - - - - - 0.724
100. SEMA5A ENSGALG00000028685 6 0.724 - - - - - - - - - 0.724 semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]

There are 65 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA