Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SDC4

Gene Name Gene ID Reads Annotation
SDC4 ENSGALG00000003932 3 syndecan 4 [Source:NCBI gene;Acc:419184]











Genes with expression patterns similar to SDC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SDC4 ENSGALG00000003932 3 3 - - 1.000 - - 1.000 - - - 1.000 syndecan 4 [Source:NCBI gene;Acc:419184]
2. SCN10A SCN10A 0 1 - - 1.000 - - - - - - -
3. B3GALT5 ENSGALG00000016128 1 1 - - 1.000 - - - - - - - beta-1,3-galactosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:920]
4. ALDH1A1 ENSGALG00000015147 3 1 - - 1.000 - - - - - - - aldehyde dehydrogenase 1 family member A1 [Source:NCBI gene;Acc:395264]
5. ENSGALG00000026368 ENSGALG00000026368 1 1 - - 1.000 - - - - - - -
6. SLC5A10 ENSGALG00000005083 0 1 - - 1.000 - - - - - - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
7. C10orf107 C10orf107 0 1 - - 1.000 - - - - - - -
8. ENSGALG00000009123 ENSGALG00000009123 9 1 - - 1.000 - - - - - - -
9. ACE2 ENSGALG00000016554 7 1 - - 1.000 - - - - - - - angiotensin I converting enzyme 2 [Source:HGNC Symbol;Acc:HGNC:13557]
10. ENSGALG00000001404 ENSGALG00000001404 6 1 - - 1.000 - - - - - - -
11. EPHA6 ENSGALG00000015418 0 1 - - 1.000 - - - - - - - EPH receptor A6, transcript variant X6
12. gga-mir-7-3 ENSGALG00000018314 1 1 - - 1.000 - - - - - - - gga-mir-7-3 [Source:miRBase;Acc:MI0001269]
13. MYH1G ENSGALG00000028612 7 1 - - 1.000 - - - - - - - Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
14. HABP2 ENSGALG00000008905 1 1 - - 1.000 - - - - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
15. C3orf83 C3orf83 117 1 - - 1.000 - - - - - - -
16. TNFRSF8 ENSGALG00000039741 6 1 - - 1.000 - - - - - - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
17. CA8 ENSGALG00000039145 109 1 - - 1.000 - - - - - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
18. KCNJ3 ENSGALG00000012537 6 1 - - 1.000 - - - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
19. ENSGALG00000016827 ENSGALG00000016827 0 1 - - 1.000 - - - - - - -
20. ENSGALG00000025781 ENSGALG00000025781 1 1 - - 1.000 - - - - - - -
21. SNORA44 SNORA44 29 1 - - 1.000 - - - - - - -
22. FABP4 ENSGALG00000030025 0 1 - - 1.000 - - - - - - - fatty acid binding protein 4 [Source:NCBI gene;Acc:374165]
23. CRB1 ENSGALG00000002287 2 1 - - 1.000 - - - - - - - crumbs 1, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:2343]
24. SPTB ENSGALG00000036805 6 1 - - 1.000 - - - - - - - spectrin beta, erythrocytic [Source:HGNC Symbol;Acc:HGNC:11274]
25. KRT9 KRT9 7 1 - - 1.000 - - - - - - -
26. ENSGALG00000026755 ENSGALG00000026755 0 1 - - 1.000 - - - - - - -
27. FBXL22 ENSGALG00000003401 1 1 - - 1.000 - - - - - - - F-box and leucine rich repeat protein 22 [Source:HGNC Symbol;Acc:HGNC:27537]
28. PLAC8 PLAC8 20 1 - - 1.000 - - - - - - -
29. TACSTD2 ENSGALG00000010867 1 1 - - 1.000 - - - - - - - tumor-associated calcium signal transducer 2 [Source:NCBI gene;Acc:772378]
30. ENSGALG00000023934 ENSGALG00000023934 3 1 - - 1.000 - - - - - - -
31. ZIC4 ENSGALG00000006810 2 1 - - 1.000 - - - - - - - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
32. ENSGALG00000027841 ENSGALG00000027841 44 1 - - 1.000 - - - - - - -
33. TVB TVB 11 1 - - 1.000 - - - - - - -
34. IL23R IL23R 25 1 - - 1.000 - - - - - - -
35. IL21R ENSGALG00000006318 3 0.948 - - - - - - - - - 0.948 interleukin 21 receptor [Source:NCBI gene;Acc:416586]
36. CPA6 ENSGALG00000041918 54 0.94 - - - - - - - - - 0.940 carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
37. SYN3 5 0.908 - - 0.908 - - - - - - - synapsin III
38. CRYBA2 ENSGALG00000011354 14 0.873 - - 0.873 - - - - - - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
39. ENSGALG00000017589 ENSGALG00000017589 36 0.867 - - - - - - - - - 0.867
40. ENSGALG00000027667 ENSGALG00000027667 12 0.834 - - 0.834 - - - - - - -
41. ENSGALG00000014750 ENSGALG00000014750 9 0.831 - - 0.831 - - - - - - -
42. HPCAL4 ENSGALG00000003829 75 0.824 - - - - - 0.824 - - - - hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]
43. PRSS56 ENSGALG00000045413 17 0.796 - - 0.796 - - - - - - - serine protease 56 [Source:HGNC Symbol;Acc:HGNC:39433]
44. CRLF1 ENSGALG00000026146 1 0.789 - - 0.789 - - - - - - - cytokine receptor like factor 1 [Source:HGNC Symbol;Acc:HGNC:2364]
45. C1QTNF9 ENSGALG00000017117 7 0.786 - - - - - 0.786 - - - - C1q and tumor necrosis factor related protein 9, transcript variant X2
46. ENSGALG00000023269 ENSGALG00000023269 1 0.781 - - 0.781 - - - - - - -
47. ZIC2 ENSGALG00000041083 1 0.781 - - 0.781 - - - - - - - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
48. MASP1 ENSGALG00000007419 141 0.781 - - 0.781 - - - - - - - mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
49. TEKT2 ENSGALG00000002319 2 0.781 - - 0.781 - - - - - - - tektin 2 [Source:HGNC Symbol;Acc:HGNC:11725]
50. SNORD47 SNORD47 61 0.767 - - - - - - - - - 0.767
51. SHC4 245 0.765 - - - - - 0.765 - - - - SHC adaptor protein 4, transcript variant X1
52. VSX1 ENSGALG00000037576 1517 0.748 - - - - - 0.748 - - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
53. SPINK7 SPINK7 254 0.737 - - 0.737 - - - - - - -
54. PLAT ENSGALG00000003709 193 0.736 - - - - - - - - - 0.736 plasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]
55. DYDC1 ENSGALG00000002432 54 0.734 - - 0.734 - - - - - - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
56. JAKMIP3 ENSGALG00000010486 2 0.732 - - 0.732 - - - - - - - Janus kinase and microtubule interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:23523]
57. BTBD19 ENSGALG00000028978 20 0.724 - - 0.724 - - - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
58. GRIP1 ENSGALG00000009895 24 0.723 - - - - - 0.723 - - - - glutamate receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18708]
59. C10orf71 ENSGALG00000027353 19 0.723 - - - - - 0.723 - - - - chromosome 10 open reading frame 71 [Source:HGNC Symbol;Acc:HGNC:26973]
60. ENSGALG00000020738 ENSGALG00000020738 2 0.717 - - - - - - - - - 0.717
61. FAM43B ENSGALG00000026367 2 0.717 - - - - - - - - - 0.717 family with sequence similarity 43 member B [Source:HGNC Symbol;Acc:HGNC:31791]
62. uc_1 uc_1 1 0.717 - - - - - - - - - 0.717
63. NEK9 ENSGALG00000010314 6 0.717 - - - - - - - - - 0.717 NIMA related kinase 9 [Source:HGNC Symbol;Acc:HGNC:18591]
64. ENSGALG00000020389 ENSGALG00000020389 5 0.717 - - - - - - - - - 0.717
65. ENSGALG00000027856 ENSGALG00000027856 5 0.717 - - - - - - - - - 0.717
66. ENSGALG00000011567 ENSGALG00000011567 2 0.717 - - - - - - - - - 0.717
67. CCNJL ENSGALG00000040152 4 0.717 - - - - - - - - - 0.717 cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
68. CAMK4L ENSGALG00000015203 5 0.717 - - - - - - - - - 0.717 calcium/calmodulin-dependent protein kinase IV-like, transcript variant X3
69. THSD1 ENSGALG00000028083 2 0.717 - - - - - - - - - 0.717 thrombospondin type 1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17754]
70. ENSGALG00000016269 ENSGALG00000016269 3 0.717 - - - - - - - - - 0.717
71. ENSGALG00000015172 ENSGALG00000015172 1 0.717 - - - - - - - - - 0.717
72. GCNT1 ENSGALG00000015166 4 0.717 - - - - - - - - - 0.717 glucosaminyl (N-acetyl) transferase 1, core 2 [Source:HGNC Symbol;Acc:HGNC:4203]
73. gga-mir-19b-2 ENSGALG00000028596 3 0.717 - - - - - - - - - 0.717 gga-mir-19b-2 [Source:miRBase;Acc:MI0029332]
74. BRPF3 8 0.717 - - - - - - - - - 0.717 bromodomain and PHD finger containing, 3, transcript variant X2
75. C11orf87 ENSGALG00000017155 2 0.717 - - - - - - - - - 0.717 chromosome 11 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:33788]
76. ENSGALG00000021836 ENSGALG00000021836 1 0.717 - - - - - - - - - 0.717
77. DUSP8 ENSGALG00000006647 3 0.717 - - - - - - - - - 0.717 dual specificity phosphatase 8 [Source:HGNC Symbol;Acc:HGNC:3074]
78. GABRP ENSGALG00000002152 17 0.717 - - - - - - - - - 0.717 gamma-aminobutyric acid type A receptor pi subunit [Source:HGNC Symbol;Acc:HGNC:4089]
79. MAFA ENSGALG00000026264 11 0.717 - - - - - - - - - 0.717 MAF bZIP transcription factor A [Source:NCBI gene;Acc:395881]
80. IL15 ENSGALG00000009870 3 0.717 - - - - - - - - - 0.717 interleukin 15 [Source:NCBI gene;Acc:395258]
81. FAM73A FAM73A 7 0.717 - - - - - - - - - 0.717
82. PDE1C ENSGALG00000039935 16 0.717 - - - - - - - - - 0.717 phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
83. ENSGALG00000015523 ENSGALG00000015523 9 0.717 - - - - - - - - - 0.717
84. ENSGALG00000015966 ENSGALG00000015966 4 0.717 - - - - - - - - - 0.717
85. PLG ENSGALG00000004293 11 0.717 - - - - - - - - - 0.717 plasminogen
86. GPRC6A ENSGALG00000014925 21 0.717 - - - - - - - - - 0.717 G protein-coupled receptor class C group 6 member A [Source:HGNC Symbol;Acc:HGNC:18510]
87. NRAP ENSGALG00000008914 24 0.714 - - - - - - - - - 0.714 nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
88. MOCS3 ENSGALG00000007986 308 0.713 - - - - - 0.713 - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
89. OTOGL ENSGALG00000010342 1 0.708 - - 0.708 - - - - - - - otogelin like [Source:HGNC Symbol;Acc:HGNC:26901]
90. GRIK4 ENSGALG00000006638 22 0.703 - - - - - - - - - 0.703 glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA