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Results for SCIN

Gene Name Gene ID Reads Annotation
SCIN ENSGALG00000010770 883 scinderin [Source:NCBI gene;Acc:420588]











Genes with expression patterns similar to SCIN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCIN ENSGALG00000010770 883 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 scinderin [Source:NCBI gene;Acc:420588]
2. COL9A3 ENSGALG00000005628 2842 3.135 - - 0.823 0.741 - 0.786 0.785 - - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
3. COL8A1 ENSGALG00000015253 2505 3.113 - - 0.857 0.766 - 0.788 0.702 - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
4. EMILIN3 ENSGALG00000030012 6200 3.027 - - 0.745 0.788 - 0.769 0.725 - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
5. COL9A2 ENSGALG00000027526 4685 2.997 - - 0.821 0.754 - 0.716 0.706 - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
6. C9H2ORF82 ENSGALG00000040264 4201 2.49 - - 0.890 0.779 - 0.821 - - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
7. T ENSGALG00000011489 2619 2.443 - - 0.880 0.748 - 0.815 - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
8. COL9A1 ENSGALG00000015970 3788 2.414 - - 0.843 0.812 - 0.759 - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
9. TAC1 ENSGALG00000009737 2211 2.357 - - 0.821 0.708 - 0.828 - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
10. RAB38 ENSGALG00000028018 1046 2.257 - - 0.763 0.751 - 0.743 - - - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
11. TIMP3 ENSGALG00000028627 8706 1.625 - - 0.825 - - 0.800 - - - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
12. SST ENSGALG00000007361 1383 1.603 - - 0.807 0.796 - - - - - - somatostatin [Source:NCBI gene;Acc:396279]
13. SCARA3 ENSGALG00000026651 2559 1.581 - - 0.848 - - 0.733 - - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
14. OCA2 ENSGALG00000016740 421 1.572 - - - 0.796 - 0.776 - - - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
15. TF ENSGALG00000006453 14007 1.539 - - 0.783 - - 0.756 - - - - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
16. SPON2 ENSGALG00000038433 1240 1.534 - - - 0.729 - 0.805 - - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
17. SAMD3 ENSGALG00000032409 459 1.504 - - - 0.738 - 0.766 - - - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
18. ZNF385B ENSGALG00000009012 290 1.489 - - 0.750 - - 0.739 - - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
19. OSF-2 OSF-2 10433 1.439 - 0.705 0.734 - - - - - - -
20. B3GNT7 ENSGALG00000007701 929 0.83 - - - - - 0.830 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
21. ACAN ENSGALG00000006725 184 0.829 - - - - - 0.829 - - - - aggrecan [Source:NCBI gene;Acc:395798]
22. CCL17 ENSGALG00000024466 10 0.829 - - - - - 0.829 - - - - C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
23. RRAD ENSGALG00000005140 183 0.821 - - - - - 0.821 - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
24. HOXA10 ENSGALG00000026631 1 0.801 - - - - - 0.801 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
25. APOD ENSGALG00000006995 2 0.801 - - - - - 0.801 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
26. KCNG1 ENSGALG00000007980 26 0.801 - - - - - 0.801 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
27. SPINK5 SPINK5 195 0.79 - - - - - 0.790 - - - -
28. EPB41L3 ENSGALG00000038678 5863 0.785 - - 0.785 - - - - - - - erythrocyte membrane protein band 4.1 like 3 [Source:HGNC Symbol;Acc:HGNC:3380]
29. SHH ENSGALG00000006379 1943 0.772 - - 0.772 - - - - - - - sonic hedgehog [Source:NCBI gene;Acc:395615]
30. ENSGALG00000008822 ENSGALG00000008822 221 0.771 - - - - - 0.771 - - - -
31. WWP2 ENSGALG00000000699 5040 0.762 - - 0.762 - - - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
32. CYP1B1 ENSGALG00000025822 3143 0.759 - - 0.759 - - - - - - - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
33. SNCA ENSGALG00000010379 160 0.758 - - - - - 0.758 - - - - synuclein alpha [Source:NCBI gene;Acc:395393]
34. LRRTM1 ENSGALG00000015967 85 0.758 - - - - - 0.758 - - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
35. NPY7R ENSGALG00000021303 215 0.753 - - - - - 0.753 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
36. CHRDL1 ENSGALG00000008072 711 0.753 - - - - - 0.753 - - - - chordin like 1 [Source:NCBI gene;Acc:373985]
37. CCK ENSGALG00000029788 213 0.751 - - - - - 0.751 - - - - cholecystokinin [Source:NCBI gene;Acc:414884]
38. FBLN2 619 0.751 - - - - - 0.751 - - - - fibulin 2, transcript variant X7
39. PCDH17 ENSGALG00000016941 1006 0.746 - - - - - 0.746 - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
40. LEFTY2 ENSGALG00000009256 1 0.743 - - - - - 0.743 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
41. PTH3R PTH3R 214 0.743 - - - - - 0.743 - - - -
42. ENSGALG00000019585 ENSGALG00000019585 6 0.74 - - - 0.740 - - - - - -
43. RGS18 ENSGALG00000021143 120 0.737 - - - - - 0.737 - - - - regulator of G-protein signaling 18 [Source:NCBI gene;Acc:424361]
44. DOK3 ENSGALG00000026914 7 0.735 - - 0.735 - - - - - - - docking protein 3 [Source:NCBI gene;Acc:429960]
45. RYR2 ENSGALG00000010812 95 0.731 - - 0.731 - - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
46. SOX9 ENSGALG00000004386 14802 0.726 - - 0.726 - - - - - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
47. VPAC2 VPAC2 45 0.724 - - - - - 0.724 - - - -
48. AKT1 ENSGALG00000011620 4089 0.721 - - - - - - - 0.721 - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
49. SPNS3 ENSGALG00000001410 173 0.715 - - - - - 0.715 - - - - sphingolipid transporter 3 (putative) [Source:HGNC Symbol;Acc:HGNC:28433]
50. IGFBP2 ENSGALG00000011469 26 0.713 - - - - - 0.713 - - - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
51. PAX1 ENSGALG00000039040 3339 0.711 - - 0.711 - - - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
52. LECT1 LECT1 12694 0.711 - - 0.711 - - - - - - -
53. HCLS1 ENSGALG00000039682 34 0.705 - - - - - 0.705 - - - - hematopoietic cell-specific Lyn substrate 1 [Source:NCBI gene;Acc:426867]
54. SLC22A4 ENSGALG00000035026 443 0.704 - - - - - - 0.704 - - - solute carrier family 22 member 4 [Source:NCBI gene;Acc:416327]
55. RGS4 ENSGALG00000002564 201 0.702 - - - - - 0.702 - - - - regulator of G-protein signaling 4 [Source:NCBI gene;Acc:378901]
56. TXNRD1 ENSGALG00000035345 4784 0.702 - - - 0.702 - - - - - - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
57. TSPAN7 ENSGALG00000016251 6674 0.7 - - - - - - 0.700 - - - tetraspanin 7, transcript variant X2
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA