Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RRP7A

Gene Name Gene ID Reads Annotation
RRP7A ENSGALG00000011866 7718 ribosomal RNA processing 7 homolog A [Source:NCBI gene;Acc:417975]











Genes with expression patterns similar to RRP7A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RRP7A ENSGALG00000011866 7718 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal RNA processing 7 homolog A [Source:NCBI gene;Acc:417975]
2. SF3B3 ENSGALG00000002531 19397 1.557 - - - - - - 0.730 0.827 - - splicing factor 3b subunit 3, transcript variant X2
3. PTPMT1 ENSGALG00000008091 6160 1.536 - - - - - - 0.723 0.813 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
4. TBL3 ENSGALG00000005558 8363 1.516 - - - - - - 0.736 0.780 - - transducin beta like 3 [Source:NCBI gene;Acc:416545]
5. IARS ENSGALG00000004813 12936 1.506 - - - - - - 0.759 0.747 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
6. UNC119B ENSGALG00000026722 8622 1.502 - - - - - - - 0.801 0.701 - unc-119 lipid binding chaperone B [Source:HGNC Symbol;Acc:HGNC:16488]
7. SMARCAL1 ENSGALG00000011475 1948 1.481 - - - - - - 0.713 0.768 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 [Source:HGNC Symbol;Acc:HGNC:11102]
8. IREB2 ENSGALG00000035462 10659 1.471 - - - - - - 0.712 0.759 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
9. STRADA ENSGALG00000000550 6912 1.471 - - - - - - 0.728 0.743 - - STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
10. FADS1 ENSGALG00000007127 5231 1.441 - - - - - - 0.733 0.708 - - fatty acid desaturase 1
11. MRPL46 ENSGALG00000006782 5033 1.415 - - - - - - 0.707 0.708 - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
12. ER81 ER81 3714 1.412 - - - - - - 0.711 0.701 - -
13. ATG16L1 ENSGALG00000001619 3562 1.41 - - - - - - 0.705 0.705 - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
14. BLMH ENSGALG00000004259 36907 0.866 - - - - - - - 0.866 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
15. SPCS1 ENSGALG00000001655 7718 0.841 - - - - - - - 0.841 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
16. EIF5B ENSGALG00000016764 30681 0.841 - - - - - - - 0.841 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
17. NDUFA12 ENSGALG00000011325 19807 0.84 - - - - - - - 0.840 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
18. TM4SF18 4553 0.835 - - - - - - - 0.835 - - transmembrane 4 L six family member 18, transcript variant X2
19. NANS ENSGALG00000015320 10552 0.832 - - - - - - - 0.832 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
20. ORC1 ENSGALG00000010623 2859 0.831 - - - - - - 0.831 - - - origin recognition complex subunit 1 [Source:NCBI gene;Acc:424640]
21. TMEM258 ENSGALG00000038292 31116 0.831 - - - - - - - 0.831 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
22. TMEM14A ENSGALG00000019894 5279 0.83 - - - - - - - 0.830 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
23. GCSH ENSGALG00000032679 29231 0.828 - - - - - - - 0.828 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
24. PUS1 ENSGALG00000002354 10153 0.827 - - - - - - - 0.827 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
25. DAD1 ENSGALG00000035626 32604 0.825 - - - - - - - 0.825 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
26. NIP7 ENSGALG00000000650 23932 0.823 - - - - - - - 0.823 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
27. BANP ENSGALG00000005872 994 0.823 - - - - - - - 0.823 - - BTG3 associated nuclear protein [Source:NCBI gene;Acc:415834]
28. CHRAC1 ENSGALG00000040823 5695 0.814 - - - - - - - 0.814 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
29. TMEM165 ENSGALG00000027886 5468 0.813 - - - - - - - 0.813 - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
30. ENSGALG00000001861 ENSGALG00000001861 10150 0.813 - - - - - - - 0.813 - -
31. NFYB ENSGALG00000041193 6158 0.812 - - - - - - - 0.812 - - nuclear transcription factor Y subunit beta [Source:NCBI gene;Acc:396205]
32. ENSGALG00000005870 ENSGALG00000005870 4343 0.811 - - - - - - - 0.811 - -
33. LONP2 ENSGALG00000003942 3380 0.81 - - - - - - - 0.810 - - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
34. C10orf88 ENSGALG00000000011 6026 0.809 - - - - - - - 0.809 - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
35. CPOX ENSGALG00000015240 5292 0.808 - - - - - - - 0.808 - - coproporphyrinogen oxidase
36. EPC2 ENSGALG00000012453 1798 0.808 - - - - - - 0.808 - - - enhancer of polycomb homolog 2 [Source:HGNC Symbol;Acc:HGNC:24543]
37. FAM18B1 ENSGALG00000001335 5177 0.807 - - - - - - - 0.807 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
38. MSH6 ENSGALG00000008957 6396 0.806 - - - - - - - 0.806 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
39. PSMB3 ENSGALG00000001597 22588 0.805 - - - - - - - 0.805 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
40. SSR1 ENSGALG00000012798 62626 0.803 - - - - - - - 0.803 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
41. RRP1B ENSGALG00000035696 12309 0.801 - - - - - - - 0.801 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
42. NCBP2_1 ENSGALG00000006843 7170 0.8 - - - - - - - 0.800 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
43. PI4KA ENSGALG00000040756 3973 0.8 - - - - - - 0.800 - - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
44. SUDS3 ENSGALG00000007393 8322 0.799 - - - - - - 0.799 - - - SDS3 homolog, SIN3A corepressor complex component [Source:NCBI gene;Acc:427713]
45. DLAT ENSGALG00000007904 3297 0.798 - - - - - - - 0.798 - - dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
46. STRN3 ENSGALG00000040464 9045 0.798 - - - - - - - 0.798 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
47. NUP85 ENSGALG00000007974 21249 0.797 - - - - - - - 0.797 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
48. CTNNBL1 ENSGALG00000006817 6765 0.797 - - - - - - - 0.797 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
49. ARG2 ENSGALG00000009519 19523 0.797 - - - - - - - 0.797 - - arginase 2 [Source:NCBI gene;Acc:423272]
50. CCNH ENSGALG00000015641 8051 0.792 - - - - - - - 0.792 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
51. MRPL2 ENSGALG00000008597 16500 0.791 - - - - - - - 0.791 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
52. C11H16ORF80 C11H16ORF80 18673 0.791 - - - - - - - 0.791 - -
53. CHDZ CHDZ 10381 0.79 - - - - - - - 0.790 - -
54. RFWD3 2315 0.79 - - - - - - 0.790 - - - ring finger and WD repeat domain 3
55. PSMD13 ENSGALG00000043684 14720 0.79 - - - - - - - 0.790 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
56. GABPB1 ENSGALG00000023440 5676 0.788 - - - - - - - 0.788 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
57. HSF2 ENSGALG00000038420 5259 0.788 - - - - - - - 0.788 - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
58. SEC22A ENSGALG00000011697 7981 0.787 - - - - - - - 0.787 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
59. CRIPT ENSGALG00000010014 4311 0.787 - - - - - - - 0.787 - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
60. MED21 ENSGALG00000027435 5766 0.787 - - - - - - - 0.787 - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
61. SLC12A4 ENSGALG00000034179 5674 0.786 - - - - - - - 0.786 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
62. NOP16 ENSGALG00000003355 10692 0.786 - - - - - - - 0.786 - - NOP16 nucleolar protein
63. PHF14 ENSGALG00000038041 13687 0.786 - - - - - - - 0.786 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
64. GFM1 ENSGALG00000009634 7213 0.785 - - - - - - - 0.785 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
65. SETD3 ENSGALG00000034802 4125 0.785 - - - - - - - 0.785 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
66. SRBD1 ENSGALG00000009990 4568 0.784 - - - - - - - 0.784 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
67. PHPT1 ENSGALG00000039061 17343 0.783 - - - - - - - 0.783 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
68. ZWILCH ENSGALG00000007736 4939 0.783 - - - - - - - 0.783 - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
69. YRDC ENSGALG00000029001 6529 0.782 - - - - - - - 0.782 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
70. C1GALT1 ENSGALG00000009752 7148 0.782 - - - - - - - 0.782 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
71. RPA3 ENSGALG00000010700 6212 0.782 - - - - - - - 0.782 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
72. FAM174A ENSGALG00000026203 8369 0.782 - - - - - - - 0.782 - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
73. CASP6 ENSGALG00000012186 6639 0.781 - - - - - - - 0.781 - - caspase 6 [Source:NCBI gene;Acc:395477]
74. RBM45 ENSGALG00000009202 6057 0.781 - - - - - - - 0.781 - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
75. PCTP ENSGALG00000003099 5851 0.781 - - - - - - - 0.781 - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
76. RNFT1 ENSGALG00000005205 2888 0.781 - - - - - - 0.781 - - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
77. WDR4 ENSGALG00000016187 1713 0.78 - - - - - - - 0.780 - - Gallus gallus WD repeat domain 4 (WDR4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321598]
78. UTP18 ENSGALG00000002985 7129 0.779 - - - - - - - 0.779 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
79. HOXA3 ENSGALG00000027925 4287 0.779 - - - - - - - 0.779 - - homeobox A3 [Source:HGNC Symbol;Acc:HGNC:5104]
80. DNAJA4 ENSGALG00000036850 6847 0.779 - - - - - - - 0.779 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
81. MTA3 ENSGALG00000009925 1914 0.779 - - - - - - - 0.779 - - metastasis associated 1 family member 3 [Source:HGNC Symbol;Acc:HGNC:23784]
82. THAP5 ENSGALG00000009494 6540 0.778 - - - - - - 0.778 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
83. RFC1 ENSGALG00000014298 6516 0.778 - - - - - - - 0.778 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
84. PLK1 ENSGALG00000006110 12892 0.778 - - - - - - - 0.778 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
85. GART ENSGALG00000037076 4264 0.778 - - - - - - - 0.778 - - phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase [Source:NCBI gene;Acc:395315]
86. BRP44L BRP44L 30452 0.778 - - - - - - 0.778 - - -
87. FANCL ENSGALG00000030022 7423 0.778 - - - - - - - 0.778 - - FA complementation group L [Source:NCBI gene;Acc:421202]
88. ANAPC16 ENSGALG00000004410 18001 0.777 - - - - - - - 0.777 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
89. TXNRD3 ENSGALG00000039363 8016 0.777 - - - - - - - 0.777 - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
90. CYB5A ENSGALG00000013708 8287 0.777 - - - - - - 0.777 - - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
91. UTP15 ENSGALG00000013510 13122 0.775 - - - - - - - 0.775 - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
92. TBP ENSGALG00000011171 5759 0.775 - - - - - - - 0.775 - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
93. NOL6 ENSGALG00000030730 7191 0.775 - - - - - - - - - 0.775 nucleolar protein 6
94. DHX37 ENSGALG00000002964 3497 0.772 - - - - - - - 0.772 - - DEAH-box helicase 37 [Source:HGNC Symbol;Acc:HGNC:17210]
95. RNF219 ENSGALG00000016911 4458 0.772 - - - - - - - 0.772 - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
96. EMC3 ENSGALG00000003738 10363 0.772 - - - - - - - 0.772 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
97. DNAL4 ENSGALG00000043451 4469 0.772 - - - - - - - 0.772 - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
98. C5H15ORF29 C5H15ORF29 3709 0.77 - - - - - - - 0.770 - -
99. SLMO2 SLMO2 9207 0.77 - - - - - - - 0.770 - -
100. RPF2 ENSGALG00000037087 12788 0.77 - - - - - - 0.770 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]

There are 355 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA