Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPS19BP1

Gene Name Gene ID Reads Annotation
RPS19BP1 ENSGALG00000029810 5768 ribosomal protein S19 binding protein 1 [Source:NCBI gene;Acc:418011]











Genes with expression patterns similar to RPS19BP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPS19BP1 ENSGALG00000029810 5768 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S19 binding protein 1 [Source:NCBI gene;Acc:418011]
2. SMG1 ENSGALG00000006829 1875 1.588 - - - - - - 0.799 0.789 - - SMG1, nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]
3. DNAJC16 ENSGALG00000032832 750 1.548 - - - - - - 0.800 0.748 - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
4. CCNE2 ENSGALG00000040794 1229 1.531 - - - - - - 0.819 0.712 - - cyclin E2 [Source:NCBI gene;Acc:420231]
5. ENTPD8L ENSGALG00000008936 731 1.508 - - - - - - 0.796 0.712 - - ectonucleoside triphosphate diphosphohydrolase 8-like
6. HTATSF1 ENSGALG00000006410 3526 0.92 - - - - - - 0.920 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
7. PARL ENSGALG00000002315 15943 0.905 - - - - - - 0.905 - - - presenilin associated rhomboid like
8. CDC42SE2 ENSGALG00000027258 4725 0.902 - - - - - - 0.902 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
9. PAPD7 ENSGALG00000013061 2031 0.901 - - - - - - 0.901 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
10. UBE2V2 ENSGALG00000028133 7044 0.898 - - - - - - 0.898 - - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
11. RIT1 ENSGALG00000014647 7174 0.898 - - - - - - 0.898 - - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
12. LIMCH1 ENSGALG00000014258 1987 0.884 - - - - - - 0.884 - - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
13. SHROOM2 ENSGALG00000030802 4517 0.883 - - - - - - 0.883 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
14. LONP1 ENSGALG00000040492 7133 0.877 - - - - - - 0.877 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
15. IK ENSGALG00000037172 12100 0.877 - - - - - - 0.877 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
16. DNPEP ENSGALG00000011318 10623 0.874 - - - - - - 0.874 - - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
17. SLC30A4 ENSGALG00000005703 5696 0.872 - - - - - - 0.872 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
18. DPYSL3 ENSGALG00000007582 7743 0.87 - - - - - - 0.870 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
19. SRP72 ENSGALG00000011403 13666 0.87 - - - - - - 0.870 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
20. CCNK ENSGALG00000011138 6416 0.868 - - - - - - 0.868 - - - cyclin K [Source:NCBI gene;Acc:423446]
21. EIF3I ENSGALG00000003337 28832 0.868 - - - - - - 0.868 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
22. BMI1 ENSGALG00000041267 6618 0.866 - - - - - - 0.866 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
23. SELM SELM 6366 0.864 - - - - - - 0.864 - - -
24. URM1 ENSGALG00000004971 17880 0.863 - - - - - - 0.863 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
25. NIPA2 ENSGALG00000016737 3792 0.863 - - - - - - 0.863 - - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
26. CLDND1 ENSGALG00000039538 5048 0.863 - - - - - - 0.863 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
27. ALDH18A1 ENSGALG00000034655 3038 0.859 - - - - - - 0.859 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
28. VPS29 ENSGALG00000004529 22509 0.857 - - - - - - 0.857 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
29. PROS1 ENSGALG00000015409 3685 0.857 - - - - - - 0.857 - - - protein S [Source:HGNC Symbol;Acc:HGNC:9456]
30. LPAR1 ENSGALG00000015729 3874 0.856 - - - - - - 0.856 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
31. PALD1 ENSGALG00000004465 3553 0.854 - - - - - - 0.854 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
32. DTYMK ENSGALG00000006305 11736 0.854 - - - - - - 0.854 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
33. C14orf80 C14orf80 1921 0.853 - - - - - - 0.853 - - -
34. ORC4 ENSGALG00000012448 8405 0.853 - - - - - - 0.853 - - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
35. NEK4 ENSGALG00000041428 4473 0.851 - - - - - - 0.851 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
36. CCDC101 CCDC101 9111 0.851 - - - - - - 0.851 - - -
37. MBTPS1 ENSGALG00000003293 4843 0.85 - - - - - - 0.850 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
38. ENSGALG00000028164 ENSGALG00000028164 3325 0.848 - - - - - - 0.848 - - -
39. NPHP4 ENSGALG00000000966 1698 0.848 - - - - - - 0.848 - - - nephrocystin 4, transcript variant X5
40. NCAPG2 ENSGALG00000006525 2319 0.847 - - - - - - 0.847 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
41. ROR1 ENSGALG00000011019 2155 0.847 - - - - - - 0.847 - - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
42. WIPI1 ENSGALG00000004215 3359 0.847 - - - - - - 0.847 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
43. ATM ENSGALG00000017159 893 0.845 - - - - - - 0.845 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
44. TOP3B ENSGALG00000030051 5953 0.844 - - - - - - 0.844 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
45. CDC73 ENSGALG00000002469 4586 0.843 - - - - - - 0.843 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
46. SGSM3 ENSGALG00000012033 1839 0.842 - - - - - - 0.842 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
47. OMA1 ENSGALG00000010861 3328 0.842 - - - - - - 0.842 - - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
48. TNFAIP8 ENSGALG00000027761 2383 0.842 - - - - - - 0.842 - - - TNF alpha induced protein 8 [Source:NCBI gene;Acc:427384]
49. MED4 ENSGALG00000016995 3309 0.841 - - - - - - 0.841 - - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
50. FAM57A ENSGALG00000004820 1492 0.841 - - - - - - 0.841 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
51. SCAF4 ENSGALG00000033965 2027 0.84 - - - - - - 0.840 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
52. GGCT ENSGALG00000030552 3446 0.838 - - - - - - 0.838 - - - gamma-glutamylcyclotransferase
53. SUN1 ENSGALG00000003781 3442 0.838 - - - - - - 0.838 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
54. ENSGALG00000002852 ENSGALG00000002852 2687 0.836 - - - - - - 0.836 - - -
55. SYNGR2 ENSGALG00000027902 6953 0.833 - - - - - - 0.833 - - - Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
56. HAUS1 ENSGALG00000040397 6195 0.833 - - - - - - 0.833 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
57. COPS8 ENSGALG00000033385 10166 0.832 - - - - - - 0.832 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
58. MST1 ENSGALG00000002722 994 0.832 - - - - - - 0.832 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
59. UBE2E1 ENSGALG00000011286 5483 0.832 - - - - - - 0.832 - - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
60. ANKMY2 ENSGALG00000010804 3061 0.832 - - - - - - 0.832 - - - ankyrin repeat and MYND domain containing 2 [Source:NCBI gene;Acc:420593]
61. NAA16 ENSGALG00000032808 3366 0.831 - - - - - - 0.831 - - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
62. RPE ENSGALG00000002847 7644 0.831 - - - - - - 0.831 - - - ribulose-5-phosphate-3-epimerase, transcript variant X2
63. MGLL ENSGALG00000032736 612 0.831 - - - - - - 0.831 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
64. MRPL10 ENSGALG00000014387 12386 0.83 - - - - - - 0.830 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
65. HYOU1 ENSGALG00000007659 3555 0.83 - - - - - - 0.830 - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
66. DIEXF ENSGALG00000009887 4782 0.83 - - - - - - 0.830 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
67. USP20 ENSGALG00000041104 3186 0.829 - - - - - - 0.829 - - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
68. RCAN3 ENSGALG00000004282 7778 0.829 - - - - - - 0.829 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
69. CANX ENSGALG00000032148 11297 0.829 - - - - - - 0.829 - - - calnexin [Source:NCBI gene;Acc:416288]
70. TM2D3 ENSGALG00000026271 2566 0.828 - - - - - - 0.828 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
71. PEX16 ENSGALG00000008421 3684 0.827 - - - - - - 0.827 - - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
72. NDRG3 ENSGALG00000001492 5919 0.827 - - - - - - 0.827 - - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
73. TMEM135 2283 0.826 - - - - - - 0.826 - - - transmembrane protein 135, transcript variant X4
74. IFT74 ENSGALG00000001801 1932 0.826 - - - - - - 0.826 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
75. PKN3 532 0.825 - - - - - - 0.825 - - - protein kinase N3, transcript variant X2
76. CYB5R3 ENSGALG00000014122 7664 0.825 - - - - - - 0.825 - - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
77. FTSJ2 FTSJ2 2951 0.823 - - - - - - 0.823 - - -
78. GGA.8379 GGA.8379 4419 0.823 - - - - - - 0.823 - - -
79. NUP205 ENSGALG00000011662 4157 0.822 - - - - - - 0.822 - - - nucleoporin 205
80. USP54 ENSGALG00000005232 2749 0.822 - - - - - - 0.822 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
81. PDHX ENSGALG00000033753 2799 0.822 - - - - - - 0.822 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
82. XPO7 ENSGALG00000001838 1875 0.821 - - - - - - 0.821 - - - exportin 7 [Source:NCBI gene;Acc:426925]
83. ABHD17A ENSGALG00000041163 5578 0.821 - - - - - - 0.821 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
84. ZFYVE19 ENSGALG00000008460 2750 0.821 - - - - - - 0.821 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
85. MTDH ENSGALG00000034050 9525 0.818 - - - - - - 0.818 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
86. BIVM ENSGALG00000016861 3987 0.818 - - - - - - 0.818 - - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
87. SPG11 ENSGALG00000008180 1890 0.815 - - - - - - 0.815 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
88. FEN1 ENSGALG00000033781 16551 0.815 - - - - - - 0.815 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
89. ERMP1 ENSGALG00000000438 1136 0.814 - - - - - - 0.814 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
90. PARN ENSGALG00000003091 6363 0.814 - - - - - - 0.814 - - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
91. OCRL ENSGALG00000003920 1812 0.814 - - - - - - 0.814 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
92. DAB2 ENSGALG00000003803 6143 0.813 - - - - - - 0.813 - - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
93. CCNL1 ENSGALG00000009699 1033 0.813 - - - - - - 0.813 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
94. FAM193A ENSGALG00000015667 3075 0.813 - - - - - - 0.813 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
95. SQLE ENSGALG00000036915 4172 0.812 - - - - - - 0.812 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
96. ETV4 ENSGALG00000036678 2424 0.811 - - - - - - 0.811 - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
97. PIF1 ENSGALG00000009032 2342 0.809 - - - - - - 0.809 - - - PIF1 5'-to-3' DNA helicase [Source:HGNC Symbol;Acc:HGNC:26220]
98. NIN ENSGALG00000012361 2284 0.809 - - - - - - 0.809 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
99. MARK3 ENSGALG00000011505 14846 0.806 - - - - - - 0.806 - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
100. MED16 ENSGALG00000001978 2387 0.806 - - - - - - 0.806 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]

There are 235 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA