Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF208

Gene Name Gene ID Reads Annotation
RNF208 ENSGALG00000008911 141 ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]











Genes with expression patterns similar to RNF208

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNF208 ENSGALG00000008911 141 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
2. ZDHHC8 ENSGALG00000002124 35 2.467 - - 0.727 - - 0.850 - 0.890 - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
3. ENSGALG00000027143 ENSGALG00000027143 23 1.62 - - - - - 0.768 - 0.852 - -
4. CD200R1A CD200R1A 105 1.475 - - - - - 0.765 - - - 0.710
5. ENSGALG00000009407 ENSGALG00000009407 148 0.923 - - - - - - - 0.923 - -
6. PLA2G10L ENSGALG00000019233 11 0.911 - - - - - 0.911 - - - - phospholipase A2 group X-like, transcript variant X2
7. FBLN7 ENSGALG00000046358 27 0.909 - - - - - - 0.909 - - - Gallus gallus fibulin 7 (FBLN7), mRNA. [Source:RefSeq mRNA;Acc:NM_001326496]
8. TVB TVB 11 0.909 - - - - - - 0.909 - - -
9. LDHD ENSGALG00000023828 60 0.909 - - - - - - 0.909 - - - lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
10. MB ENSGALG00000012541 260 0.896 - - - - - - - 0.896 - - myoglobin [Source:NCBI gene;Acc:418056]
11. TFCP2L1 ENSGALG00000011635 4 0.89 - - - - - - - 0.890 - - transcription factor CP2 like 1 [Source:HGNC Symbol;Acc:HGNC:17925]
12. VWA8 ENSGALG00000016955 34 0.89 - - - - - - - 0.890 - - von Willebrand factor A domain containing 8 [Source:HGNC Symbol;Acc:HGNC:29071]
13. NANOG ENSGALG00000027772 89 0.89 - - - - - - - 0.890 - - Nanog homeobox [Source:NCBI gene;Acc:100272166]
14. DEPTOR ENSGALG00000005790 6 0.89 - - - - - - - 0.890 - - DEP domain containing MTOR-interacting protein
15. KHDRBS3 ENSGALG00000031519 501 0.89 - - - - - - - 0.890 - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
16. VEGFRKDRL ENSGALG00000007646 18 0.89 - - - - - - - 0.890 - - vascular endothelial growth factor receptor kdr-like, transcript variant X2
17. ERC2 ENSGALG00000005419 24 0.89 - - - - - - - 0.890 - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
18. VGLL3 ENSGALG00000015497 39 0.89 - - - - - - - 0.890 - - vestigial like family member 3 [Source:HGNC Symbol;Acc:HGNC:24327]
19. YAP1 ENSGALG00000038154 24 0.89 - - - - - - - 0.890 - - Yes associated protein 1 [Source:NCBI gene;Acc:396171]
20. RERGL ENSGALG00000013112 16 0.89 - - - - - - - 0.890 - - RERG like [Source:HGNC Symbol;Acc:HGNC:26213]
21. DOCK2 ENSGALG00000002080 13 0.89 - - - - - - - 0.890 - - dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]
22. gga-mir-1458 ENSGALG00000030959 41 0.89 - - - - - - - 0.890 - - gga-mir-1458 [Source:miRBase;Acc:MI0007063]
23. CCNA1 ENSGALG00000017052 23 0.888 - - - - - - 0.888 - - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
24. SUSD1 ENSGALG00000015677 12 0.888 - - - - - - 0.888 - - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
25. ENSGALG00000023265 ENSGALG00000023265 4 0.888 - - - - - - 0.888 - - -
26. ZC2HC1A ENSGALG00000035932 17 0.888 - - - - - - 0.888 - - - zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
27. GAL2 GAL2 32 0.888 - - - - - - 0.888 - - -
28. MMP23B ENSGALG00000001392 53 0.888 - - - - - - 0.888 - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
29. PTPRS ENSGALG00000004048 70 0.888 - - - - - - 0.888 - - - protein tyrosine phosphatase, receptor type S [Source:NCBI gene;Acc:396375]
30. PPIL3 ENSGALG00000008228 150 0.888 - - - - - - 0.888 - - - peptidylprolyl isomerase like 3 [Source:NCBI gene;Acc:424075]
31. CAD ENSGALG00000016524 94 0.888 - - - - - - 0.888 - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, transcript variant X2
32. CSF1R ENSGALG00000005725 5 0.888 - - - - - - 0.888 - - - Gallus gallus colony stimulating factor 1 receptor (CSF1R), mRNA. [Source:RefSeq mRNA;Acc:NM_001321517]
33. ZFYVE21 ENSGALG00000011534 7 0.888 - - - - - - 0.888 - - - zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
34. TRMT13 ENSGALG00000005290 95 0.888 - - - - - - 0.888 - - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
35. C4A ENSGALG00000017040 5 0.888 - - - - - - 0.888 - - - complement C4A (Rodgers blood group), transcript variant X2
36. FOXN3 ENSGALG00000010665 18 0.888 - - - - - - 0.888 - - - forkhead box N3 [Source:HGNC Symbol;Acc:HGNC:1928]
37. ENSGALG00000002522 ENSGALG00000002522 21 0.888 - - - - - - 0.888 - - -
38. AREG ENSGALG00000010866 16 0.888 - - - - - - 0.888 - - - amphiregulin [Source:NCBI gene;Acc:428752]
39. C1orf172 C1orf172 1 0.888 - - - - - - 0.888 - - -
40. SPAG8 2 0.888 - - - - - - 0.888 - - - sperm associated antigen 8, transcript variant X3
41. ENSGALG00000020719 ENSGALG00000020719 25 0.888 - - - - - - 0.888 - - -
42. ABCC8 ENSGALG00000006172 41 0.888 - - - - - - 0.888 - - - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
43. TPP1 52 0.888 - - - - - - 0.888 - - - tripeptidyl peptidase 1
44. CHRNA3 ENSGALG00000003014 6 0.888 - - - - - - 0.888 - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
45. ENSGALG00000020781 ENSGALG00000020781 5 0.888 - - - - - - 0.888 - - -
46. CCDC96 9 0.888 - - - - - - 0.888 - - - coiled-coil domain containing 96
47. KMO ENSGALG00000007503 7 0.888 - - - - - - 0.888 - - - kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
48. APOAIV APOAIV 5 0.888 - - - - - - 0.888 - - -
49. NEDD9 ENSGALG00000012747 30 0.888 - - - - - - 0.888 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
50. ZBTB33 ENSGALG00000008611 15 0.888 - - - - - - - 0.888 - - zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
51. TMEM170B ENSGALG00000012744 24 0.888 - - - - - - 0.888 - - - transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244]
52. GCNT7 ENSGALG00000007717 11 0.888 - - - - - - 0.888 - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
53. P2RY12 ENSGALG00000036470 20 0.888 - - - - - - 0.888 - - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
54. CEP350 ENSGALG00000003955 184 0.888 - - - - - - 0.888 - - - centrosomal protein 350 [Source:HGNC Symbol;Acc:HGNC:24238]
55. MYCT1 ENSGALG00000013603 44 0.888 - - - - - - 0.888 - - - MYC target 1 [Source:HGNC Symbol;Acc:HGNC:23172]
56. KBTBD8 ENSGALG00000007569 20 0.888 - - - - - - 0.888 - - - kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
57. TMEM240 ENSGALG00000035387 14 0.888 - - - - - - 0.888 - - - transmembrane protein 240 [Source:HGNC Symbol;Acc:HGNC:25186]
58. MEGF9 3 0.888 - - - - - - 0.888 - - - multiple EGF-like-domains 9
59. TMEM132D ENSGALG00000002671 12 0.888 - - - - - - 0.888 - - - transmembrane protein 132D, transcript variant X6
60. GOLPH3L ENSGALG00000014640 272 0.888 - - - - - - 0.888 - - - golgi phosphoprotein 3 like, transcript variant X2
61. EFCAB4A EFCAB4A 12 0.888 - - - - - - 0.888 - - -
62. KDSR ENSGALG00000012882 57 0.888 - - - - - - 0.888 - - - 3-ketodihydrosphingosine reductase [Source:NCBI gene;Acc:420902]
63. RYR2 ENSGALG00000010812 95 0.884 - - - - - - - 0.884 - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
64. ENSGALG00000003619 ENSGALG00000003619 58 0.884 - - - - - - - 0.884 - -
65. CNOT6L ENSGALG00000010333 13 0.884 - - - - - - - 0.884 - - CCR4-NOT transcription complex subunit 6 like [Source:HGNC Symbol;Acc:HGNC:18042]
66. KIAA0195 KIAA0195 48 0.883 - - - - - - - 0.883 - -
67. TMEM255B ENSGALG00000035839 46 0.878 - - - - - - - 0.878 - - transmembrane protein 255B [Source:HGNC Symbol;Acc:HGNC:28297]
68. LPHN3 LPHN3 41 0.864 - - - - - - - 0.864 - -
69. ENSGALG00000015966 ENSGALG00000015966 4 0.864 - - - - - - - 0.864 - -
70. AKAP14 26 0.863 - - - - - - - 0.863 - - A-kinase anchoring protein 14, transcript variant X1
71. ZNF362 ENSGALG00000026558 11 0.86 - - - - - - - 0.860 - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
72. LIN7A ENSGALG00000010939 8 0.852 - - - - - - - 0.852 - - lin-7 homolog A, crumbs cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:17787]
73. TSPO ENSGALG00000014166 60 0.85 - - - - - - 0.850 - - - translocator protein [Source:NCBI gene;Acc:418226]
74. FASTKD1 ENSGALG00000009841 45 0.829 - - - - - 0.829 - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
75. JADE2 ENSGALG00000006424 4 0.827 - - - - - - - - - 0.827 jade family PHD finger 2 [Source:HGNC Symbol;Acc:HGNC:22984]
76. TEX2 ENSGALG00000003496 23 0.825 - - - - - - - 0.825 - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
77. ARF1 ENSGALG00000005393 364 0.823 - - - - - 0.823 - - - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
78. ETAA1 ENSGALG00000027922 1684 0.823 - - - - - 0.823 - - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
79. C2CD3 ENSGALG00000017314 13 0.82 - - - - - - - 0.820 - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
80. MYL1 ENSGALG00000002907 1300 0.817 - - - - - - - 0.817 - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
81. LOC418298 ENSGALG00000014680 23 0.812 - - - - - - - 0.812 - - solute carrier family 25 member 33-like
82. FIBCD1 ENSGALG00000003866 2 0.811 - - - - - 0.811 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
83. LUZP2 ENSGALG00000030151 585 0.81 - - - - - 0.810 - - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
84. WASF2 ENSGALG00000014012 30 0.81 - - - - - 0.810 - - - - WAS protein family member 2 [Source:HGNC Symbol;Acc:HGNC:12733]
85. C3H20ORF94 C3H20ORF94 414 0.807 - - - - - 0.807 - - - -
86. TGIF2 ENSGALG00000024081 21 0.806 - - - - - 0.806 - - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
87. C9orf96 C9orf96 43 0.804 - - - - 0.804 - - - - -
88. SNORA56 SNORA56 7 0.803 - - - - - - - - - 0.803
89. RAD54L ENSGALG00000010356 7 0.803 - - - - - - - - - 0.803 RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
90. PPP1R16B ENSGALG00000003568 25 0.803 - - - - - - - - - 0.803 protein phosphatase 1 regulatory subunit 16B [Source:NCBI gene;Acc:419170]
91. MAP3K8 ENSGALG00000007356 188 0.798 - - - - - 0.798 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
92. SGK196 SGK196 83 0.797 - - - - - 0.797 - - - -
93. TRMT12 ENSGALG00000006773 707 0.797 - - - - - 0.797 - - - - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
94. KCNC4 ENSGALG00000000400 129 0.795 - - - - - - - 0.795 - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
95. C15orf60 C15orf60 16 0.792 - - - - - 0.792 - - - -
96. ASB15 ENSGALG00000008814 7 0.792 - - - - - 0.792 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
97. TRPV6 ENSGALG00000014746 3 0.792 - - - - - 0.792 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
98. LCT ENSGALG00000012260 21 0.792 - - - - - 0.792 - - - - lactase [Source:NCBI gene;Acc:424294]
99. REM1 ENSGALG00000045602 4 0.792 - - - - - 0.792 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
100. CHRNB3 ENSGALG00000015384 9 0.792 - - - - - 0.792 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]

There are 81 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA