Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB7B

Gene Name Gene ID Reads Annotation
RAB7B ENSGALG00000000769 438 RAB7B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30513]











Genes with expression patterns similar to RAB7B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB7B ENSGALG00000000769 438 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB7B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30513]
2. PHYHD1 ENSGALG00000042266 90 0.868 - - - - - - - 0.868 - - phytanoyl-CoA dioxygenase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23396]
3. FAM163B ENSGALG00000026179 47 0.842 - - - - - - - 0.842 - - family with sequence similarity 163 member B [Source:HGNC Symbol;Acc:HGNC:33277]
4. GILT GILT 1343 0.833 - - - - - - - 0.833 - -
5. FAT4 ENSGALG00000011823 774 0.83 - - - - - - - 0.830 - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
6. PREX2 ENSGALG00000042354 134 0.827 - - - - - - - 0.827 - - phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
7. CYTIP ENSGALG00000012545 25 0.823 - - - - - - - 0.823 - - cytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]
8. GRPEL2 ENSGALG00000002673 105 0.812 - - - - - - - 0.812 - - GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
9. KIN ENSGALG00000030702 1608 0.791 - - - - - - - 0.791 - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
10. GSTT1L ENSGALG00000005204 476 0.788 - - - - - - - 0.788 - - glutathione S-transferase theta 1-like
11. PSTPIP2 ENSGALG00000040136 37 0.786 - - - - - - - 0.786 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
12. TET2 ENSGALG00000010592 143 0.785 - - - - - - - 0.785 - - tet methylcytosine dioxygenase 2 [Source:NCBI gene;Acc:422540]
13. ANKZF1 ENSGALG00000011332 2247 0.783 - - - - - - - 0.783 - - ankyrin repeat and zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25527]
14. SLC35C1 ENSGALG00000008438 486 0.778 - - - - - - - 0.778 - - solute carrier family 35 member C1 [Source:NCBI gene;Acc:423203]
15. FBXO48 ENSGALG00000008753 244 0.772 - - - - - - - 0.772 - - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
16. TMEM63A ENSGALG00000009275 1481 0.771 - - - - - - - 0.771 - - transmembrane protein 63A [Source:HGNC Symbol;Acc:HGNC:29118]
17. GATSL3 668 0.771 - - - - - - - 0.771 - - GATS protein like 3, transcript variant X2
18. USP32 ENSGALG00000005350 1686 0.77 - - - - - - 0.770 - - - ubiquitin specific peptidase 32, transcript variant X2
19. CHN2 ENSGALG00000011164 1491 0.764 - - - - - - - 0.764 - - chimerin 2
20. PLCG2 ENSGALG00000033507 348 0.761 - - - - - - - 0.761 - - phospholipase C gamma 2 [Source:HGNC Symbol;Acc:HGNC:9066]
21. SIAH3 ENSGALG00000026849 384 0.757 - - - - - - - 0.757 - - siah E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:HGNC:30553]
22. LRRFIP2 ENSGALG00000033102 8250 0.757 - - - - - - 0.757 - - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
23. TM2D1 ENSGALG00000020614 764 0.755 - - - - - - - 0.755 - - TM2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24142]
24. SLC1A3 ENSGALG00000003582 2283 0.755 - - - - - - - 0.755 - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
25. LPCAT1 ENSGALG00000013189 197 0.754 - - - - - - - - - 0.754 lysophosphatidylcholine acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:25718]
26. GINS1 ENSGALG00000008538 4786 0.752 - - - - - - - 0.752 - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
27. CSTB ENSGALG00000014410 7346 0.752 - - - - - - - 0.752 - - cystatin B [Source:NCBI gene;Acc:418267]
28. EMG1 ENSGALG00000014568 8102 0.75 - - - - - - 0.750 - - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
29. TBC1D22A ENSGALG00000043058 1614 0.747 - - - - - - - 0.747 - - TBC1 domain family member 22A [Source:NCBI gene;Acc:428128]
30. PTRHD1 ENSGALG00000016610 3636 0.746 - - - - - - - 0.746 - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
31. HAGH ENSGALG00000005398 168 0.744 - - - - - - - 0.744 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
32. PDXK ENSGALG00000016205 26 0.739 - - - - - - - 0.739 - - pyridoxal kinase [Source:NCBI gene;Acc:418549]
33. SBNO2 ENSGALG00000037522 1546 0.738 - - - - - - 0.738 - - - strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]
34. PLXND1 ENSGALG00000008473 21 0.733 - - - - - - - 0.733 - - plexin D1 [Source:HGNC Symbol;Acc:HGNC:9107]
35. ENSGALG00000026941 ENSGALG00000026941 653 0.733 - - - - - - - 0.733 - -
36. PPP2CA_1 ENSGALG00000006462 3170 0.732 - - - - - - - 0.732 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
37. LGALSL ENSGALG00000027096 390 0.732 - - - - - - - 0.732 - - galectin like [Source:NCBI gene;Acc:421278]
38. ENSGALG00000014545 ENSGALG00000014545 285 0.731 - - - - - - - 0.731 - -
39. CCLI10 CCLI10 239 0.731 - - - - - - - 0.731 - -
40. UBE2E1 ENSGALG00000011286 5483 0.731 - - - - - - - 0.731 - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
41. DNAJA2 ENSGALG00000004115 1670 0.731 - - - - - - - 0.731 - - DnaJ heat shock protein family (Hsp40) member A2 [Source:NCBI gene;Acc:415744]
42. CASP2 ENSGALG00000014698 2757 0.73 - - - - - - 0.730 - - - caspase 2 [Source:NCBI gene;Acc:395857]
43. KCNG3 ENSGALG00000009919 243 0.729 - - - - - - - 0.729 - - potassium voltage-gated channel modifier subfamily G member 3 [Source:HGNC Symbol;Acc:HGNC:18306]
44. NT5C3B ENSGALG00000003651 5190 0.729 - - - - - - 0.729 - - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
45. PVALB1 PVALB1 267 0.729 - - - - - - - 0.729 - -
46. ZNF800 ENSGALG00000033997 415 0.728 - - - - - - - 0.728 - - zinc finger protein 800 [Source:NCBI gene;Acc:417747]
47. DCT ENSGALG00000016899 37 0.728 - - - - - - - 0.728 - - dopachrome tautomerase [Source:NCBI gene;Acc:395775]
48. USP8 ENSGALG00000005894 4499 0.728 - - - - - - - 0.728 - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
49. GJC1 ENSGALG00000000997 2279 0.728 - - - - - - - 0.728 - - gap junction protein gamma 1 [Source:NCBI gene;Acc:396501]
50. CYP2J22 ENSGALG00000011394 76 0.728 - - - - - - - 0.728 - - Gallus gallus cytochrome P450, family 2, subfamily J, polypeptide 22 (CYP2J22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329480]
51. PHF5A ENSGALG00000011953 2395 0.725 - - - - - - 0.725 - - - PHD finger protein 5A [Source:NCBI gene;Acc:417991]
52. COPS7A ENSGALG00000014467 1123 0.724 - - - - - - 0.724 - - - COP9 signalosome subunit 7A [Source:NCBI gene;Acc:418283]
53. MRPS17 ENSGALG00000002379 30243 0.724 - - - - - - 0.724 - - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
54. CHL1 ENSGALG00000037856 1565 0.722 - - - - - - - 0.722 - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
55. AASDHPPT ENSGALG00000027981 1017 0.722 - - - - - - - 0.722 - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
56. SEMA4B ENSGALG00000008297 11202 0.721 - - - - - - - 0.721 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
57. KRTCAP3 ENSGALG00000016510 453 0.721 - - - - - - - 0.721 - - keratinocyte associated protein 3 [Source:HGNC Symbol;Acc:HGNC:28943]
58. ENSGALG00000018499 ENSGALG00000018499 100 0.72 - - - - - - - 0.720 - -
59. TAGAP ENSGALG00000013747 34 0.72 - - - - - - - 0.720 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
60. UBE3C ENSGALG00000006461 57 0.72 - - - - - - - 0.720 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
61. KLF11 ENSGALG00000016440 65 0.72 - - - - - - - 0.720 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
62. CPB1 ENSGALG00000006834 25 0.72 - - - - - - - 0.720 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
63. DHX58 ENSGALG00000023821 15 0.72 - - - - - - - 0.720 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
64. EGFL6 ENSGALG00000016584 298 0.719 - - - - - - - 0.719 - - EGF like domain multiple 6 [Source:NCBI gene;Acc:418637]
65. gga-mir-454 ENSGALG00000033526 22 0.719 - - - - - - - 0.719 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
66. IRF-4 IRF-4 19 0.719 - - - - - - - 0.719 - -
67. DEPDC5 ENSGALG00000006766 1592 0.719 - - - - - - - 0.719 - - DEP domain containing 5, transcript variant X6
68. ZDHHC20 ENSGALG00000017126 58 0.718 - - - - - - - 0.718 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
69. STRBP ENSGALG00000029927 3516 0.717 - - - - - - 0.717 - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
70. SFI1 104 0.717 - - - - - - - 0.717 - - SFI1 centrin binding protein, transcript variant X6
71. TRIP13 ENSGALG00000033834 6590 0.716 - - - - - - 0.716 - - - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
72. SENP7 ENSGALG00000044642 48 0.714 - - - - - - - 0.714 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
73. MTDH ENSGALG00000034050 9525 0.714 - - - - - - - 0.714 - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
74. CXCL13L2 ENSGALG00000010338 370 0.712 - - - - - - - 0.712 - - C-X-C motif chemokine ligand 13-like 2 [Source:NCBI gene;Acc:422510]
75. FBXO22 ENSGALG00000039897 377 0.711 - - - - - - - 0.711 - - F-box protein 22 [Source:NCBI gene;Acc:415355]
76. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 0.709 - - - - - - 0.709 - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
77. BTK ENSGALG00000004958 272 0.709 - - - - - - - 0.709 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
78. SH3GL1 ENSGALG00000001121 159 0.708 - - - - - - - 0.708 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
79. HMGXB3 ENSGALG00000005770 119 0.705 - - - - - - - 0.705 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
80. VIP ENSGALG00000013604 153 0.703 - - - - - - - 0.703 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
81. SDAD1 ENSGALG00000011543 5191 0.703 - - - - - - 0.703 - - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
82. SERINC2 ENSGALG00000021685 1581 0.703 - - - - - - - 0.703 - - serine incorporator 2 [Source:NCBI gene;Acc:419558]
83. RUFY2 1442 0.702 - - - - - - - 0.702 - - RUN and FYVE domain containing 2, transcript variant X1
84. TTC3 ENSGALG00000016050 4115 0.7 - - - - - - 0.700 - - - tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA