Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PKHD1

Gene Name Gene ID Reads Annotation
PKHD1 ENSGALG00000042136 8 PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]











Genes with expression patterns similar to PKHD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PKHD1 ENSGALG00000042136 8 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]
2. MAL ENSGALG00000008552 4 2 - - - - - 1.000 - - - 1.000 mal, T cell differentiation protein [Source:NCBI gene;Acc:416707]
3. LEPR ENSGALG00000011058 4 2 - - 1.000 1.000 - - - - - - leptin receptor [Source:NCBI gene;Acc:374223]
4. PYROXD2 ENSGALG00000007014 14 1.937 - - - - - 0.937 - - - 1.000 pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
5. MYH13 4 1.735 - - - - - 1.000 - 0.735 - - myosin, heavy chain 13, skeletal muscle
6. ENSGALG00000013751 ENSGALG00000013751 26 1 - - - - - - - - - 1.000
7. OLFML2B ENSGALG00000002667 8 1 - - - - - - - - - 1.000 olfactomedin like 2B [Source:HGNC Symbol;Acc:HGNC:24558]
8. HEP21 ENSGALG00000000115 117 1 - - - - - - - - - 1.000 hen egg protein 21 kDa [Source:NCBI gene;Acc:395192]
9. GABRA5 ENSGALG00000016744 12 1 - - 1.000 - - - - - - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
10. ARX ENSGALG00000042604 1 1 - - 1.000 - - - - - - - aristaless related homeobox [Source:HGNC Symbol;Acc:HGNC:18060]
11. IL5RA ENSGALG00000008267 7 1 - - - 1.000 - - - - - - interleukin 5 receptor subunit alpha [Source:NCBI gene;Acc:771801]
12. ENSGALG00000026922 ENSGALG00000026922 3 1 - - 1.000 - - - - - - -
13. GPR143 ENSGALG00000016615 14 1 - - - - - - - - - 1.000 G protein-coupled receptor 143 [Source:NCBI gene;Acc:418652]
14. METTL21C ENSGALG00000016864 0 1 - - - 1.000 - - - - - - methyltransferase like 21C [Source:HGNC Symbol;Acc:HGNC:33717]
15. TRPM8 ENSGALG00000004116 2 1 - - - 1.000 - - - - - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
16. CDK18 ENSGALG00000000692 0 1 - - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
17. IL1RAP ENSGALG00000007253 6 1 - - - - - - - - - 1.000 interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
18. EFHB ENSGALG00000011267 2 1 - - - - - - - - - 1.000 EF-hand domain family member B [Source:HGNC Symbol;Acc:HGNC:26330]
19. FNDC7 ENSGALG00000001983 24 1 - - - - - 1.000 - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
20. MEGF9 3 1 - - 1.000 - - - - - - - multiple EGF-like-domains 9
21. SOHYE2L ENSGALG00000007118 1 1 - - - - - 1.000 - - - - sodium/hydrogen exchanger 2-like
22. KRT12 ENSGALG00000019715 1 1 - - - - - - - - - 1.000 keratin 12 [Source:HGNC Symbol;Acc:HGNC:6414]
23. ANO3 ENSGALG00000013311 16 1 - - - - - 1.000 - - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
24. OTOL1 ENSGALG00000026305 14 1 - - 1.000 - - - - - - - otolin 1 [Source:HGNC Symbol;Acc:HGNC:34071]
25. COL28A1 ENSGALG00000010259 0 1 - - - 1.000 - - - - - - collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442]
26. ENSGALG00000026006 ENSGALG00000026006 0 1 - - - - - - - - - 1.000
27. GABRG1 ENSGALG00000020143 5 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
28. VSTM5 ENSGALG00000017217 3 1 - - - - - - - - - 1.000 V-set and transmembrane domain containing 5 [Source:HGNC Symbol;Acc:HGNC:34443]
29. CTDSP1 ENSGALG00000027768 2 1 - - - - - - - - - 1.000 CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]
30. HSD11B1a ENSGALG00000028858 40 1 - - - - - - - - - 1.000 hydroxysteroid (11-beta) dehydrogenase 1a, transcript variant X1
31. HOXA6 ENSGALG00000028908 1 1 - - 1.000 - - - - - - - homeobox A6 [Source:NCBI gene;Acc:420630]
32. IKBKE ENSGALG00000013356 1 1 - - - - - 1.000 - - - - inhibitor of nuclear factor kappa B kinase subunit epsilon [Source:HGNC Symbol;Acc:HGNC:14552]
33. DLX1 ENSGALG00000018439 16 1 - - - 1.000 - - - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
34. ASIC5 ENSGALG00000009366 1 1 - - - - - - - - - 1.000 acid sensing ion channel subunit family member 5 [Source:HGNC Symbol;Acc:HGNC:17537]
35. SH3BP5 ENSGALG00000039337 17 1 - - - 1.000 - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
36. CCDC33 7 1 - - - 1.000 - - - - - - coiled-coil domain containing 33, transcript variant X2
37. PLEK ENSGALG00000008756 1 1 - - - 1.000 - - - - - - pleckstrin [Source:NCBI gene;Acc:395669]
38. CAPN9 158 1 - - 1.000 - - - - - - - calpain 9
39. KCNK10 ENSGALG00000010598 7 1 - - - 1.000 - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
40. SMYD3 ENSGALG00000010653 14 1 - - - 1.000 - - - - - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
41. SLC38A5 SLC38A5 0 1 - - - - - - - - - 1.000
42. PLD5 ENSGALG00000010737 5 1 - - 1.000 - - - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
43. GRB14 ENSGALG00000020703 42 1 - - - - - - - - - 1.000 growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
44. TANC2 26 1 - - - - - 1.000 - - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
45. GZMM ENSGALG00000015192 8 1 - - - - - 1.000 - - - - granzyme M
46. TFAP2E ENSGALG00000039497 1 1 - - - - - - - - - 1.000 transcription factor AP-2 epsilon [Source:HGNC Symbol;Acc:HGNC:30774]
47. FAM73B FAM73B 2 1 - - - - - 1.000 - - - -
48. CALN1 ENSGALG00000001122 0 1 - - - 1.000 - - - - - - calneuron 1 [Source:HGNC Symbol;Acc:HGNC:13248]
49. SNRKL ENSGALG00000026043 1 1 - - 1.000 - - - - - - - SNF-related serine/threonine-protein kinase-like, transcript variant X2
50. GPR22 ENSGALG00000008032 5 1 - - 1.000 - - - - - - - G protein-coupled receptor 22, transcript variant X1
51. RIPPLY1 RIPPLY1 34 1 - - - - - - - - - 1.000
52. FAM173B ENSGALG00000013043 4 1 - - - 1.000 - - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
53. SYPL1 ENSGALG00000029006 126 1 - - - - - 1.000 - - - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
54. BARL ENSGALG00000002170 4 1 - - - 1.000 - - - - - - bile acid receptor-like, transcript variant X2
55. LOC100857820 ENSGALG00000001824 16 1 - - - - - - - - - 1.000 uncharacterized LOC100857820
56. LOC422320 ENSGALG00000007703 6 1 - - - - - - - - - 1.000 ligand of Numb protein X 2-like, transcript variant X1
57. PADI1 ENSGALG00000039572 4 1 - - 1.000 - - - - - - - Gallus gallus peptidyl arginine deiminase 1 (PADI1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318439]
58. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - - - - - 1.000
59. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - 1.000 - - - - - -
60. ENSGALG00000010002 ENSGALG00000010002 25 1 - - - - - - - - - 1.000
61. ENSGALG00000014946 ENSGALG00000014946 40 1 - - - - - - - - - 1.000
62. GBP ENSGALG00000026152 38 1 - - - - - - - - - 1.000 Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
63. FAM43B ENSGALG00000026367 2 1 - - - - - 1.000 - - - - family with sequence similarity 43 member B [Source:HGNC Symbol;Acc:HGNC:31791]
64. ZNF185 ZNF185 0 1 - - - - - - - - - 1.000
65. ENSGALG00000023409 ENSGALG00000023409 0 1 - - - 1.000 - - - - - -
66. HSD11B1L ENSGALG00000012860 4 1 - - - - - 1.000 - - - - hydroxysteroid 11-beta dehydrogenase 1 like [Source:NCBI gene;Acc:408034]
67. TMEM204 ENSGALG00000029047 8 1 - - - 1.000 - - - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
68. ENSGALG00000027945 ENSGALG00000027945 2 1 - - 1.000 - - - - - - -
69. KIAA1211L ENSGALG00000016755 2 1 - - - - - - - - - 1.000 KIAA1211 like [Source:HGNC Symbol;Acc:HGNC:33454]
70. ANO4 ENSGALG00000011614 1 1 - - - - - - - - - 1.000 anoctamin 4 [Source:HGNC Symbol;Acc:HGNC:23837]
71. GPR132 ENSGALG00000027407 9 1 - - - 1.000 - - - - - - G protein-coupled receptor 132, transcript variant X2
72. ENSGALG00000023424 ENSGALG00000023424 1 1 - - - - - 1.000 - - - -
73. SLC4A5 ENSGALG00000032146 3 1 - - - - - 1.000 - - - - solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
74. ARL10 ENSGALG00000003360 2 1 - - - - - - - - - 1.000 ADP ribosylation factor like GTPase 10 [Source:NCBI gene;Acc:416229]
75. FAXC ENSGALG00000015489 0 1 - - - 1.000 - - - - - - failed axon connections homolog [Source:HGNC Symbol;Acc:HGNC:20742]
76. WDR17 ENSGALG00000043106 4 1 - - - 1.000 - - - - - - WD repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:16661]
77. MMP1 ENSGALG00000019061 1 1 - - - - - - - - - 1.000 matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]
78. DHX58 ENSGALG00000023821 15 1 - - - - - - - - - 1.000 Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
79. GLDN ENSGALG00000013293 1 1 - - - - - - - - - 1.000 gliomedin [Source:HGNC Symbol;Acc:HGNC:29514]
80. IL10R2 IL10R2 72 1 - - - - - 1.000 - - - -
81. HHLA2 ENSGALG00000022871 19 1 - - - - - - - - - 1.000 HERV-H LTR-associating 2 [Source:HGNC Symbol;Acc:HGNC:4905]
82. FEM1B ENSGALG00000028906 4 1 - - - - - - - - - 1.000 fem-1 homolog B [Source:NCBI gene;Acc:415559]
83. GLIPR1L ENSGALG00000010224 1 1 - - 1.000 - - - - - - - GLI pathogenesis-related 1-like [Source:NCBI gene;Acc:417862]
84. EREG ENSGALG00000010864 46 1 - - 1.000 - - - - - - - epiregulin [Source:NCBI gene;Acc:408036]
85. CLDN3 ENSGALG00000022557 189 1 - - - 1.000 - - - - - - claudin 3 [Source:NCBI gene;Acc:374029]
86. DRD5 ENSGALG00000014975 1 1 - - - - - - - - - 1.000 dopamine receptor D5 [Source:HGNC Symbol;Acc:HGNC:3026]
87. AMPD3 ENSGALG00000005662 5 1 - - - - - - - - - 1.000 adenosine monophosphate deaminase 3 [Source:NCBI gene;Acc:423041]
88. TPO ENSGALG00000016370 98 1 - - - 1.000 - - - - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
89. FOXRED2 ENSGALG00000012530 36 1 - - - - - 1.000 - - - - FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
90. ENSGALG00000019399 ENSGALG00000019399 0 1 - - - - - - - - - 1.000
91. GABRA6 ENSGALG00000001695 3 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor alpha6 subunit [Source:NCBI gene;Acc:395931]
92. VENTX VENTX 50 1 - - - - - - - - - 1.000
93. TFF2 ENSGALG00000016165 1 1 - - - - - 1.000 - - - - trefoil factor 2 [Source:HGNC Symbol;Acc:HGNC:11756]
94. ENSGALG00000022206 ENSGALG00000022206 2 1 - - - - - - - - - 1.000
95. SEMA6B ENSGALG00000001171 73 1 - - - 1.000 - - - - - - Gallus gallus semaphorin 6B (SEMA6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001319026]
96. LRRC8A ENSGALG00000004573 2 1 - - - - - 1.000 - - - - leucine rich repeat containing 8 VRAC subunit A [Source:HGNC Symbol;Acc:HGNC:19027]
97. SPTLC3 ENSGALG00000009037 35 1 - - - - - - - - - 1.000 serine palmitoyltransferase long chain base subunit 3 [Source:HGNC Symbol;Acc:HGNC:16253]
98. ENSGALG00000026109 ENSGALG00000026109 2 1 - - - 1.000 - - - - - -
99. ATP9A ENSGALG00000007912 25 1 - - - - - - - - - 1.000 ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
100. SUPT7L ENSGALG00000010048 8 1 - - - - - - - - - 1.000 SPT7 like, STAGA complex gamma subunit [Source:HGNC Symbol;Acc:HGNC:30632]

There are 232 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA