Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDK3

Gene Name Gene ID Reads Annotation
PDK3 ENSGALG00000016323 2380 pyruvate dehydrogenase kinase 3 [Source:NCBI gene;Acc:418595]











Genes with expression patterns similar to PDK3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDK3 ENSGALG00000016323 2380 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pyruvate dehydrogenase kinase 3 [Source:NCBI gene;Acc:418595]
2. SHPK ENSGALG00000004637 2386 0.875 - - - - - - - - - 0.875 sedoheptulokinase, transcript variant X1
3. RPGR ENSGALG00000036284 186 0.872 - - - - - - - - - 0.872 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
4. C28H19ORF10 C28H19ORF10 16529 0.869 - - - - - - - - - 0.869
5. TMEM199 ENSGALG00000023757 10781 0.863 - - - - - - - - - 0.863 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
6. ENSGALG00000001919 ENSGALG00000001919 531 0.861 - - - - - - - - - 0.861
7. RP9 ENSGALG00000035453 1186 0.861 - - - - - - - - - 0.861 retinitis pigmentosa 9 (autosomal dominant)
8. PRKAB2 ENSGALG00000001678 1999 0.86 - - - - - - - - - 0.860 protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
9. APH1AL ENSGALG00000002578 2000 0.859 - - - - - - - - - 0.859 gamma-secretase subunit APH-1A-like
10. EEA1 ENSGALG00000011280 923 0.855 - - - - - - - - - 0.855 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
11. SLC38A1 ENSGALG00000009698 566 0.854 - - - - - - - - - 0.854 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
12. OBFC1 OBFC1 1071 0.854 - - - - - - - - - 0.854
13. NHLRC2 ENSGALG00000008946 387 0.854 - - - - - - - - - 0.854 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
14. ARIH2 ENSGALG00000006956 3692 0.853 - - - - - - - - - 0.853 ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
15. SUPV3L1 ENSGALG00000004197 4141 0.853 - - - - - - - - - 0.853 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
16. TTI1 ENSGALG00000006791 1218 0.852 - - - - - - - - - 0.852 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
17. TNFRSF1A ENSGALG00000039461 1569 0.85 - - - - - - - - - 0.850 TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
18. STAT5 STAT5 1796 0.85 - - - - - - - - - 0.850
19. DUSP23 1663 0.85 - - - - - - - - - 0.850 dual specificity phosphatase 23, transcript variant X1
20. NFKBIE ENSGALG00000044525 633 0.849 - - - - - - - - - 0.849 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
21. PKDCCB ENSGALG00000011166 74 0.847 - - - - - - - - - 0.847 protein kinase domain containing, cytoplasmic b
22. CCBL2 CCBL2 184 0.847 - - - - - - - - - 0.847
23. PDCD7 ENSGALG00000021027 3807 0.846 - - - - - - - - - 0.846 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
24. PRICKLE1 ENSGALG00000009556 60 0.846 - - - - - - - - - 0.846 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
25. AP3B2 2331 0.846 - - - - - - - - - 0.846 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
26. ENSGALG00000018358 ENSGALG00000018358 101 0.845 - - - - - - - - - 0.845
27. EP3 EP3 741 0.845 - - - - - - - - - 0.845
28. RASSF8 ENSGALG00000014041 850 0.845 - - - - - - - - - 0.845 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
29. TRIM3 ENSGALG00000034004 110 0.844 - - - - - - - - - 0.844 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
30. TTC3 ENSGALG00000016050 4115 0.842 - - - - - - - - - 0.842 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
31. GRPEL1 ENSGALG00000015549 11246 0.842 - - - - - - - - - 0.842 GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
32. STX6 3297 0.842 - - - - - - - - - 0.842 syntaxin 6
33. IFNAR2 ENSGALG00000041867 1596 0.84 - - - - - - - - - 0.840 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
34. NBN ENSGALG00000037686 648 0.84 - - - - - - - - - 0.840 nibrin [Source:NCBI gene;Acc:374246]
35. USP14 ENSGALG00000014920 18778 0.839 - - - - - - - - - 0.839 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
36. TFG ENSGALG00000015299 849 0.839 - - - - - - - - - 0.839 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
37. ATP2B2 ENSGALG00000030908 584 0.839 - - - - - - - - - 0.839 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
38. PROCR ENSGALG00000006547 645 0.839 - - - - - - - - - 0.839 protein C receptor [Source:NCBI gene;Acc:424867]
39. CENPJ ENSGALG00000017148 1415 0.838 - - - - - - - - - 0.838 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
40. AGMO ENSGALG00000010792 76 0.838 - - - - - - - - - 0.838 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
41. ZFPM2 ENSGALG00000040079 942 0.838 - - - - - - - - - 0.838 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
42. TGFB3 ENSGALG00000010346 3118 0.837 - - - - - - - - - 0.837 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
43. UBE3C ENSGALG00000006461 57 0.837 - - - - - - - - - 0.837 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
44. TNFRSF21 ENSGALG00000016719 2762 0.836 - - - - - - - - - 0.836 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
45. ENSGALG00000008594 ENSGALG00000008594 54 0.836 - - - - - - - - - 0.836
46. ENSGALG00000004772 ENSGALG00000004772 173 0.836 - - - - - - - - - 0.836
47. ENSGALG00000027621 ENSGALG00000027621 863 0.835 - - - - - - - - - 0.835
48. CNKSR3 ENSGALG00000027159 41 0.835 - - - - - - - - - 0.835 CNKSR family member 3, transcript variant X2
49. BCOR ENSGALG00000016245 85 0.835 - - - - - - - - - 0.835 BCL6 corepressor, transcript variant X8
50. SOS2 ENSGALG00000012273 41 0.835 - - - - - - - - - 0.835 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
51. CDC2L1 CDC2L1 894 0.834 - - - - - - - - - 0.834
52. ENSGALG00000004643 ENSGALG00000004643 2297 0.834 - - - - - - - - - 0.834
53. GPR114 GPR114 46 0.834 - - - - - - - - - 0.834
54. PCMTD2 ENSGALG00000005901 1833 0.834 - - - - - - - - - 0.834 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
55. TM6SF2 ENSGALG00000029015 109 0.834 - - - - - - - - - 0.834 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
56. EDEM2 ENSGALG00000003128 3338 0.834 - - - - - - - - - 0.834 ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
57. MAP3K8 ENSGALG00000007356 188 0.833 - - - - - - - - - 0.833 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
58. RGP1 ENSGALG00000002394 5937 0.833 - - - - - - - - - 0.833 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
59. SIRT6 ENSGALG00000001245 3716 0.833 - - - - - - - - - 0.833 sirtuin 6 [Source:NCBI gene;Acc:428332]
60. SERPINB6 ENSGALG00000012866 1582 0.833 - - - - - - - - - 0.833 serpin family B member 6 [Source:NCBI gene;Acc:420895]
61. RPRD2 ENSGALG00000014656 939 0.832 - - - - - - - - - 0.832 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
62. LIMK1 ENSGALG00000001076 1931 0.831 - - - - - - - - - 0.831 LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
63. CAPN15 ENSGALG00000002018 3353 0.831 - - - - - - - - - 0.831 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
64. CTK-1 CTK-1 1618 0.831 - - - - - - - - - 0.831
65. CKI CKI 2845 0.831 - - - - - - - - - 0.831
66. GRPEL2 ENSGALG00000002673 105 0.831 - - - - - - - - - 0.831 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
67. ADAMTS12 55 0.83 - - - - - - - - - 0.830 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
68. AHSA2 1504 0.829 - - - - - - - - - 0.829 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
69. CTCF 10811 0.828 - - - - - - - - - 0.828 CCCTC-binding factor, transcript variant X2
70. FTSJ3 ENSGALG00000032993 8929 0.828 - - - - - - - - - 0.828 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
71. ZNF142 ENSGALG00000011393 2078 0.828 - - - - - - - - - 0.828 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
72. TYSND1 ENSGALG00000033807 716 0.827 - - - - - - - - - 0.827 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
73. DLX5 ENSGALG00000009129 1395 0.826 - - - - - - - - - 0.826 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
74. RAB11FIP2 ENSGALG00000009304 913 0.825 - - - - - - - - - 0.825 RAB11 family interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29152]
75. MAP3K3 ENSGALG00000000525 115 0.824 - - - - - - - - - 0.824 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
76. RAB34 ENSGALG00000026315 1193 0.824 - - - - - - - - - 0.824 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
77. DENND1A ENSGALG00000001157 503 0.822 - - - - - - - - - 0.822 DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
78. FOXP1 127 0.822 - - - - - - - - - 0.822 forkhead box P1, transcript variant X14
79. DTX2 ENSGALG00000001905 1475 0.822 - - - - - - - - - 0.822 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
80. COL12A1 ENSGALG00000015908 1300 0.822 - - - - - - - - - 0.822 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
81. PMVK ENSGALG00000046656 645 0.821 - - - - - - - - - 0.821 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
82. IMPA2 ENSGALG00000013814 4202 0.82 - - - - - - - - - 0.820 inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]
83. CEP57 ENSGALG00000017201 524 0.82 - - - - - - - - - 0.820 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
84. FN3K ENSGALG00000001531 208 0.82 - - - - - - - - - 0.820 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
85. RFWD3 2315 0.819 - - - - - - - - - 0.819 ring finger and WD repeat domain 3
86. KIF25 ENSGALG00000011299 2601 0.819 - - - - - - - - - 0.819 kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
87. PTPRE ENSGALG00000009823 250 0.818 - - - - - - - - - 0.818 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
88. FAM96B 14435 0.816 - - - - - - - - - 0.816 family with sequence similarity 96 member B
89. VAV2 ENSGALG00000002699 503 0.816 - - - - - - - - - 0.816 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
90. CMIP ENSGALG00000038494 5016 0.815 - - - - - - - - - 0.815 c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
91. MYST2 MYST2 8078 0.815 - - - - - - - - - 0.815
92. SBNO1 ENSGALG00000003392 6731 0.814 - - - - - - - - - 0.814 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
93. RNF220 ENSGALG00000010109 3114 0.814 - - - - - - - - - 0.814 ring finger protein 220 [Source:NCBI gene;Acc:424580]
94. MBD4 ENSGALG00000020747 3644 0.813 - - - - - - - - - 0.813 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
95. VOPP1 ENSGALG00000042773 771 0.812 - - - - - - - - - 0.812 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
96. SNN ENSGALG00000028876 1687 0.812 - - - - - - - - - 0.812 stannin [Source:NCBI gene;Acc:416429]
97. TRIM24 ENSGALG00000012823 2725 0.812 - - - - - - - - - 0.812 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
98. ELL2 ENSGALG00000014678 1111 0.812 - - - - - - - - - 0.812 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
99. COQ6 ENSGALG00000010197 3283 0.811 - - - - - - - - - 0.811 coenzyme Q6, monooxygenase [Source:HGNC Symbol;Acc:HGNC:20233]
100. STAU1 ENSGALG00000004736 3828 0.81 - - - - - - - - - 0.810 staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]

There are 198 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA