Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCDH1

Gene Name Gene ID Reads Annotation
PCDH1 ENSGALG00000002553 2938 protocadherin 1 [Source:NCBI gene;Acc:416194]











Genes with expression patterns similar to PCDH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCDH1 ENSGALG00000002553 2938 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 1 [Source:NCBI gene;Acc:416194]
2. FST ENSGALG00000014908 3182 1.538 - - 0.719 - 0.819 - - - - - follistatin [Source:NCBI gene;Acc:396119]
3. TNRC6A ENSGALG00000006068 9166 0.966 - - - - - - - 0.966 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
4. VASH1 ENSGALG00000043036 1235 0.952 - - - - - - - 0.952 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
5. WNK2 ENSGALG00000038850 4712 0.952 - - - - - - - 0.952 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
6. SLC26A8 ENSGALG00000040498 253 0.951 - - - - - - - 0.951 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
7. LIPA ENSGALG00000006378 4414 0.951 - - - - - - - 0.951 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
8. NPEPL1 ENSGALG00000007533 5908 0.951 - - - - - - - 0.951 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
9. NKX-6.2 NKX-6.2 1370 0.951 - - - - - - - 0.951 - -
10. FPGT ENSGALG00000026958 788 0.95 - - - - - - - 0.950 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
11. ENSGALG00000001591 ENSGALG00000001591 784 0.95 - - - - - - - 0.950 - -
12. KPNA4 ENSGALG00000009549 3674 0.95 - - - - - - - 0.950 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
13. NCS1 ENSGALG00000012710 1104 0.95 - - - - - - - 0.950 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
14. GNE ENSGALG00000015331 1577 0.95 - - - - - - - 0.950 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
15. TOR1B TOR1B 197 0.95 - - - - - - - 0.950 - -
16. FTSJ2 FTSJ2 2951 0.95 - - - - - - - 0.950 - -
17. CAPRIN2 1473 0.95 - - - - - - - 0.950 - - caprin family member 2, transcript variant X7
18. LOC420160 ENSGALG00000004252 188 0.95 - - - - - - - 0.950 - - cathepsin L1-like, transcript variant X3
19. CAPN9 158 0.95 - - - - - - - 0.950 - - calpain 9
20. NR3C2 ENSGALG00000010035 603 0.95 - - - - - - - 0.950 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
21. YTHDF3 ENSGALG00000039774 170 0.949 - - - - - - - 0.949 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
22. SETD2 ENSGALG00000042051 2981 0.949 - - - - - - - 0.949 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
23. RASGEF1B 2014 0.949 - - - - - - - 0.949 - - RasGEF domain family member 1B, transcript variant X8
24. TBCE ENSGALG00000013950 3076 0.949 - - - - - - - 0.949 - - tubulin folding cofactor E
25. SEMA3F ENSGALG00000029621 2079 0.948 - - - - - - - 0.948 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
26. AARSD1 ENSGALG00000002880 3068 0.948 - - - - - - - 0.948 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
27. FNTA ENSGALG00000015397 3741 0.947 - - - - - - - 0.947 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
28. GNB1L ENSGALG00000001925 1981 0.947 - - - - - - - 0.947 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
29. MAP4K5 ENSGALG00000012321 3036 0.946 - - - - - - - 0.946 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
30. PLA2G7 ENSGALG00000016713 2100 0.946 - - - - - - - 0.946 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
31. SLX4 ENSGALG00000031841 1208 0.946 - - - - - - - 0.946 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
32. CHST2 ENSGALG00000034507 6172 0.946 - - - - - - - 0.946 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
33. ENSGALG00000005615 ENSGALG00000005615 4354 0.945 - - - - - - - 0.945 - -
34. HIP1R ENSGALG00000031511 1981 0.945 - - - - - - - 0.945 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
35. C2CD2 ENSGALG00000016148 2734 0.945 - - - - - - - 0.945 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
36. WDR82 ENSGALG00000025904 4783 0.944 - - - - - - - 0.944 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
37. CABLES1 ENSGALG00000014998 1636 0.943 - - - - - - - 0.943 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
38. FGD5 ENSGALG00000008546 4031 0.943 - - - - - - - 0.943 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
39. PAM16 9684 0.943 - - - - - - - 0.943 - - presequence translocase associated motor 16 homolog, transcript variant X2
40. CXorf23 1582 0.942 - - - - - - - 0.942 - - chromosome X open reading frame 23, transcript variant X3
41. VPS26A ENSGALG00000004174 9198 0.942 - - - - - - - 0.942 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
42. HMOX1 ENSGALG00000012550 1186 0.942 - - - - - - - 0.942 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
43. EXOSC1 ENSGALG00000039917 5259 0.941 - - - - - - - 0.941 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
44. MRPL10 ENSGALG00000014387 12386 0.941 - - - - - - - 0.941 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
45. CCAR1 ENSGALG00000004108 13219 0.941 - - - - - - - 0.941 - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
46. TLN2 2295 0.941 - - - - - - - 0.941 - - talin 2, transcript variant X5
47. DLGAP4 ENSGALG00000001046 6872 0.94 - - - - - - - 0.940 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
48. UBE2Q2 3861 0.939 - - - - - - - 0.939 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
49. UTP23 ENSGALG00000032400 3601 0.938 - - - - - - - 0.938 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
50. HVCN1 ENSGALG00000004562 2550 0.937 - - - - - - - 0.937 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
51. POLDIP2 ENSGALG00000003211 11664 0.936 - - - - - - - 0.936 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
52. ITCH ENSGALG00000040474 2646 0.936 - - - - - - - 0.936 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
53. FGD3 ENSGALG00000005237 4410 0.936 - - - - - - - 0.936 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
54. C5orf63 C5orf63 3718 0.936 - - - - - - - 0.936 - -
55. RABL5 RABL5 5264 0.935 - - - - - - - 0.935 - -
56. TAF12 ENSGALG00000000991 8709 0.935 - - - - - - - 0.935 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
57. C1orf21 ENSGALG00000020922 4035 0.934 - - - - - - - 0.934 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
58. EMC1 ENSGALG00000003969 6876 0.933 - - - - - - - 0.933 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
59. TARS ENSGALG00000003288 12702 0.93 - - - - - - - 0.930 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
60. AKR1B10L3 ENSGALG00000019284 5869 0.93 - - - - - - - 0.930 - - aldo-keto reductase family 1 member B10-like 3
61. CTSA ENSGALG00000006876 5380 0.93 - - - - - - - 0.930 - - cathepsin A [Source:NCBI gene;Acc:428163]
62. METTL6 ENSGALG00000040665 4467 0.926 - - - - - - - 0.926 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
63. CDC73 ENSGALG00000002469 4586 0.925 - - - - - - - 0.925 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
64. CPEB2 ENSGALG00000014516 1187 0.925 - - - - - - - 0.925 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
65. UBE2J2 ENSGALG00000001848 6527 0.924 - - - - - - - 0.924 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
66. WDR45B ENSGALG00000001563 5870 0.924 - - - - - - - 0.924 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
67. TYW3 ENSGALG00000032549 4869 0.921 - - - - - - - 0.921 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
68. SRP9 ENSGALG00000026009 12418 0.918 - - - - - - - 0.918 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
69. MRPL28 ENSGALG00000007473 19134 0.918 - - - - - - - 0.918 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
70. C10orf11 C10orf11 3087 0.917 - - - - - - - 0.917 - -
71. MBNL2 ENSGALG00000016890 3162 0.915 - - - - - - - 0.915 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
72. ENSGALG00000020092 ENSGALG00000020092 3067 0.914 - - - - - - - 0.914 - -
73. TCEA2 ENSGALG00000005976 9143 0.912 - - - - - - - 0.912 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
74. SRPK2 ENSGALG00000008154 7385 0.907 - - - - - - - 0.907 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
75. POLR2C ENSGALG00000001168 10703 0.905 - - - - - - - 0.905 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
76. PHF20L1 ENSGALG00000033205 7598 0.902 - - - - - - - 0.902 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
77. ATN1 ENSGALG00000014554 3270 0.894 - - - - - - - 0.894 - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
78. LUC7L3 ENSGALG00000007386 11944 0.891 - - - - - - - 0.891 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
79. CCT8 ENSGALG00000015821 12161 0.891 - - - - - - - 0.891 - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
80. APPBP2 ENSGALG00000005314 6447 0.87 - - - - - - - 0.870 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
81. THOC2 ENSGALG00000008507 9501 0.869 - - - - - - - 0.869 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
82. HIPK3 ENSGALG00000011695 6842 0.869 - - - - - - - 0.869 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
83. RALBP1 ENSGALG00000008405 13780 0.854 - - - - - - - 0.854 - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
84. ASPM ENSGALG00000032398 12784 0.851 - - - - - - - 0.851 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
85. COX16 ENSGALG00000020449 5959 0.848 - - - - - - - 0.848 - - cytochrome c oxidase assembly factor COX16 [Source:NCBI gene;Acc:423257]
86. NPM3 ENSGALG00000032329 21138 0.843 - - - - - - - 0.843 - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
87. SUCLG2 ENSGALG00000007652 9688 0.84 - - - - - - - 0.840 - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
88. ZNF451 ENSGALG00000016282 3380 0.839 - - - - - - - 0.839 - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
89. FBXO4 ENSGALG00000014851 2333 0.839 - - - - - - - 0.839 - - F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]
90. MOB4 ENSGALG00000008128 10322 0.837 - - - - - - - 0.837 - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
91. NID2 ENSGALG00000012394 6717 0.834 - - - - - - - 0.834 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
92. ARIH2 ENSGALG00000006956 3692 0.833 - - - - - - - 0.833 - - ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
93. PPFIBP1 ENSGALG00000014106 9864 0.822 - - - - - - - 0.822 - - PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]
94. CUEDC2 ENSGALG00000005687 8162 0.822 - - - - - - - 0.822 - - CUE domain containing 2 [Source:NCBI gene;Acc:423761]
95. GPHN ENSGALG00000009587 3045 0.82 - - - - - - - 0.820 - - gephyrin [Source:NCBI gene;Acc:428878]
96. MTO1 ENSGALG00000015923 4418 0.818 - - - - - - - 0.818 - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
97. gga-mir-1610 ENSGALG00000025580 3985 0.815 - - - - - - - 0.815 - - gga-mir-1610 [Source:miRBase;Acc:MI0007338]
98. ENSGALG00000007574 ENSGALG00000007574 7695 0.813 - - - - - - - 0.813 - -
99. OCC-1 OCC-1 1887 0.809 - - - - - - - 0.809 - -
100. MAP3K14 ENSGALG00000000685 57 0.809 - - - - - - - - - 0.809 mitogen-activated protein kinase kinase kinase 14 [Source:NCBI gene;Acc:419964]

There are 109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA