Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NUP54

Gene Name Gene ID Reads Annotation
NUP54 ENSGALG00000011506 4945 nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]











Genes with expression patterns similar to NUP54

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. NUP54 ENSGALG00000011506 4945 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]
2. EIF2B4 ENSGALG00000033575 3801 1.493 - - - - - - 0.739 - - 0.754 eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
3. CHST14 ENSGALG00000026531 7957 1.466 - - - - - - 0.728 - - 0.738 carbohydrate sulfotransferase 14
4. NEK6 ENSGALG00000001118 20333 0.872 - - - - - - 0.872 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
5. INCENP ENSGALG00000007537 16617 0.871 - - - - - - 0.871 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
6. DCAF7 ENSGALG00000000510 8681 0.863 - - - - - - 0.863 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
7. RUVBL1 ENSGALG00000005931 9379 0.86 - - - - - - 0.860 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
8. SSR3 ENSGALG00000028683 24334 0.853 - - - - - - 0.853 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
9. SNRNP40 ENSGALG00000000615 32298 0.849 - - - - - - 0.849 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
10. HSPA4 ENSGALG00000040882 20966 0.849 - - - - - - 0.849 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
11. TM4SF18 4553 0.847 - - - - - - 0.847 - - - transmembrane 4 L six family member 18, transcript variant X2
12. ENOX2 ENSGALG00000004079 4055 0.846 - - - - - - 0.846 - - - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
13. UBL3 ENSGALG00000017084 7417 0.846 - - - - - - 0.846 - - - ubiquitin like 3 [Source:NCBI gene;Acc:418921]
14. CRLS1 ENSGALG00000009214 8652 0.846 - - - - - - 0.846 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
15. RFC5 ENSGALG00000026517 26113 0.844 - - - - - - 0.844 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
16. ILF2 ENSGALG00000011570 23050 0.842 - - - - - - 0.842 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
17. ENSGALG00000017396 ENSGALG00000017396 9028 0.842 - - - - - - 0.842 - - -
18. PSMB2 ENSGALG00000026421 51885 0.841 - - - - - - 0.841 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
19. CHRAC1 ENSGALG00000040823 5695 0.84 - - - - - - 0.840 - - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
20. DDX19B ENSGALG00000039967 49600 0.839 - - - - - - 0.839 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
21. LIMD2 ENSGALG00000000529 30617 0.838 - - - - - - 0.838 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
22. WDR45B ENSGALG00000001563 5870 0.837 - - - - - - 0.837 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
23. NDUFV2 ENSGALG00000036625 29234 0.836 - - - - - - 0.836 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
24. RAB10 ENSGALG00000016535 5272 0.835 - - - - - - 0.835 - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
25. RNPS1 ENSGALG00000009288 13588 0.835 - - - - - - 0.835 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
26. PPP1R2 ENSGALG00000029789 11594 0.834 - - - - - - 0.834 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
27. NUP50 ENSGALG00000014222 11743 0.834 - - - - - - 0.834 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
28. RANBP1 ENSGALG00000002107 17715 0.833 - - - - - - 0.833 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
29. TOMM20 ENSGALG00000035299 23431 0.833 - - - - - - 0.833 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
30. MRPL15 ENSGALG00000041086 16820 0.833 - - - - - - 0.833 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
31. UTP11L UTP11L 11927 0.832 - - - - - - 0.832 - - -
32. SF3A2 ENSGALG00000021679 12580 0.832 - - - - - - 0.832 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
33. TFB2M ENSGALG00000010651 4374 0.831 - - - - - - 0.831 - - - transcription factor B2, mitochondrial
34. TMEM167A ENSGALG00000027332 13862 0.83 - - - - - - 0.830 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
35. RTCB ENSGALG00000012611 14360 0.83 - - - - - - 0.830 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
36. SH3BGRL3 ENSGALG00000038536 18187 0.829 - - - - - - 0.829 - - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
37. PSMB7 ENSGALG00000001103 42683 0.828 - - - - - - 0.828 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
38. TMX3 ENSGALG00000013757 6387 0.827 - - - - - - 0.827 - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
39. EIF2B3 ENSGALG00000010140 7992 0.826 - - - - - - 0.826 - - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
40. GGA.31975 GGA.31975 8825 0.826 - - - - - - 0.826 - - -
41. STX16 ENSGALG00000007541 6458 0.824 - - - - - - 0.824 - - - syntaxin 16 [Source:NCBI gene;Acc:419315]
42. PAPSS1 ENSGALG00000010542 5631 0.824 - - - - - - 0.824 - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
43. MRPS30 ENSGALG00000014874 3416 0.824 - - - - - - 0.824 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
44. UCHL3 ENSGALG00000016921 16208 0.822 - - - - - - 0.822 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
45. MED17 ENSGALG00000017218 5821 0.822 - - - - - - 0.822 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
46. URI1 ENSGALG00000004506 6024 0.821 - - - - - - 0.821 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
47. PEF1 ENSGALG00000040519 8522 0.821 - - - - - - 0.821 - - - penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]
48. YEATS2 ENSGALG00000036356 3194 0.82 - - - - - - 0.820 - - - YEATS domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25489]
49. KXD1 ENSGALG00000036736 3771 0.82 - - - - - - 0.820 - - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
50. NDUFA7 ENSGALG00000000629 14046 0.82 - - - - - - 0.820 - - - NADH:ubiquinone oxidoreductase subunit A7
51. GLRX3 ENSGALG00000010464 22578 0.819 - - - - - - 0.819 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
52. NUPL1 NUPL1 8197 0.819 - - - - - - 0.819 - - -
53. TXNDC17 ENSGALG00000027950 45004 0.819 - - - - - - 0.819 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
54. ABHD17B ENSGALG00000015139 2805 0.818 - - - - - - 0.818 - - - abhydrolase domain containing 17B [Source:NCBI gene;Acc:427252]
55. CASP3 ENSGALG00000010638 11572 0.817 - - - - - - 0.817 - - - caspase 3 [Source:NCBI gene;Acc:395476]
56. CDC23 ENSGALG00000007610 11945 0.817 - - - - - - 0.817 - - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
57. THOC1 ENSGALG00000014915 5846 0.817 - - - - - - 0.817 - - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
58. ATG3 ENSGALG00000015204 11277 0.817 - - - - - - 0.817 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
59. PSMG1 ENSGALG00000016062 7511 0.816 - - - - - - 0.816 - - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
60. TMEM184C ENSGALG00000010019 7856 0.816 - - - - - - 0.816 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
61. EPFIP1L ENSGALG00000007683 18050 0.814 - - - - - - 0.814 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
62. SPEN ENSGALG00000036932 9688 0.814 - - - - - - 0.814 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
63. GNAI2 ENSGALG00000035645 9535 0.814 - - - - - - 0.814 - - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
64. SMC4 ENSGALG00000009553 15715 0.814 - - - - - - 0.814 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
65. AN1ZNF5L ENSGALG00000014589 21148 0.814 - - - - - - 0.814 - - - AN1-type zinc finger protein 5-like, transcript variant X2
66. SNX7 ENSGALG00000005478 4736 0.813 - - - - - - 0.813 - - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
67. DKC1 ENSGALG00000005054 30350 0.813 - - - - - - 0.813 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
68. XRCC5 ENSGALG00000011492 6802 0.813 - - - - - - 0.813 - - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
69. MRPL20 ENSGALG00000001542 28764 0.813 - - - - - - 0.813 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
70. DNAJA4 ENSGALG00000036850 6847 0.813 - - - - - - 0.813 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
71. NDUFAB1 ENSGALG00000006073 40467 0.813 - - - - - - 0.813 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
72. DYRK2 ENSGALG00000009901 3141 0.812 - - - - - - 0.812 - - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
73. PLRG1 ENSGALG00000009257 8613 0.812 - - - - - - 0.812 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
74. R3HDM1 ENSGALG00000012246 6580 0.811 - - - - - - 0.811 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
75. CIR1 ENSGALG00000014276 7189 0.811 - - - - - - 0.811 - - - corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:426529]
76. API5 ENSGALG00000037968 18265 0.811 - - - - - - 0.811 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
77. NCAPD2 ENSGALG00000039448 8658 0.81 - - - - - - 0.810 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
78. TTC14 ENSGALG00000008889 3828 0.809 - - - - - - 0.809 - - - tetratricopeptide repeat domain 14 [Source:NCBI gene;Acc:424970]
79. UBE2D1 ENSGALG00000021213 5876 0.809 - - - - - - 0.809 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
80. MCTS1 ENSGALG00000008517 27514 0.808 - - - - - - 0.808 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
81. ADI1 ENSGALG00000025796 8636 0.808 - - - - - - 0.808 - - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
82. EIF4A2 ENSGALG00000008684 58507 0.808 - - - - - - 0.808 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
83. TMEM70 ENSGALG00000033568 10720 0.807 - - - - - - 0.807 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
84. MPI ENSGALG00000029296 11781 0.807 - - - - - - 0.807 - - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
85. CLNS1A ENSGALG00000008574 25675 0.807 - - - - - - 0.807 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
86. MRPL50 ENSGALG00000015543 11649 0.807 - - - - - - 0.807 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
87. CZH9ORF80 CZH9ORF80 12760 0.807 - - - - - - 0.807 - - -
88. RABIF ENSGALG00000000436 6449 0.806 - - - - - - 0.806 - - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
89. SEC61A2 ENSGALG00000036300 4235 0.805 - - - - - - 0.805 - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
90. NASP ENSGALG00000010255 28423 0.804 - - - - - - 0.804 - - - nuclear autoantigenic sperm protein, transcript variant X3
91. DPYSL2 ENSGALG00000000227 9668 0.804 - - - - - - 0.804 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
92. UMPS ENSGALG00000011770 11331 0.804 - - - - - - 0.804 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
93. DIMT1 ENSGALG00000020569 5150 0.804 - - - - - - 0.804 - - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
94. TARDBP ENSGALG00000002906 24748 0.804 - - - - - - 0.804 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
95. PTTG1 17936 0.803 - - - - - - 0.803 - - - pituitary tumor-transforming 1, transcript variant X1
96. ZNHIT3 ENSGALG00000026031 8652 0.803 - - - - - - 0.803 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
97. NDUFA12 ENSGALG00000011325 19807 0.803 - - - - - - 0.803 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
98. ATP2B1 ENSGALG00000030550 15123 0.803 - - - - - - 0.803 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
99. ANAPC1 ENSGALG00000008254 2519 0.802 - - - - - - 0.802 - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
100. gga-mir-1778 ENSGALG00000025181 8765 0.802 - - - - - - 0.802 - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]

There are 666 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA