Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MRRF

Gene Name Gene ID Reads Annotation
MRRF ENSGALG00000001333 2102 mitochondrial ribosome recycling factor [Source:NCBI gene;Acc:417110]











Genes with expression patterns similar to MRRF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MRRF ENSGALG00000001333 2102 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosome recycling factor [Source:NCBI gene;Acc:417110]
2. SDR42E1 ENSGALG00000005456 586 0.914 - - - - 0.914 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
3. LMTK2 ENSGALG00000003479 46 0.874 - - - - 0.874 - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
4. GRIN1 ENSGALG00000008898 18 0.871 - - - - 0.871 - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
5. MCAM ENSGALG00000030027 26 0.868 - - - - 0.868 - - - - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
6. ENSGALG00000025953 ENSGALG00000025953 65 0.867 - - - - 0.867 - - - - -
7. C10orf67 15 0.862 - - - - 0.862 - - - - - chromosome 10 open reading frame 67, transcript variant X2
8. CYR61 ENSGALG00000008661 43 0.86 - - - - 0.860 - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
9. CCDC39 ENSGALG00000021855 23 0.859 - - - - 0.859 - - - - - coiled-coil domain containing 39
10. TDRD12 ENSGALG00000004704 19 0.856 - - - - 0.856 - - - - - tudor domain containing 12, transcript variant X3
11. FAM208B 24 0.856 - - - - 0.856 - - - - - family with sequence similarity 208 member B, transcript variant X3
12. TJP3 ENSGALG00000000748 45 0.85 - - - - 0.850 - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
13. IRG1 IRG1 21 0.849 - - - - 0.849 - - - - -
14. PHC2 62 0.849 - - - - 0.849 - - - - - polyhomeotic homolog 2
15. CCDC180 109 0.847 - - - - 0.847 - - - - - coiled-coil domain containing 180
16. TMCC1 ENSGALG00000008487 65 0.847 - - - - 0.847 - - - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
17. FGF7 ENSGALG00000028158 189 0.843 - - - - - 0.843 - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
18. TMEM164 ENSGALG00000008076 734 0.841 - - - - 0.841 - - - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
19. LARP4B ENSGALG00000006672 57 0.837 - - - - 0.837 - - - - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
20. RTDR1 RTDR1 104 0.836 - - - - 0.836 - - - - -
21. ERN2 ENSGALG00000027592 186 0.835 - - - - 0.835 - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
22. SDCCAG3 1208 0.83 - - - - 0.830 - - - - - serologically defined colon cancer antigen 3
23. PTCH1 ENSGALG00000012620 4840 0.829 - - - - - 0.829 - - - - patched 1 [Source:NCBI gene;Acc:395806]
24. MAP3K21 ENSGALG00000011008 54 0.829 - - - - 0.829 - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
25. LRP1B ENSGALG00000012407 125 0.819 - - - - 0.819 - - - - - LDL receptor related protein 1B [Source:HGNC Symbol;Acc:HGNC:6693]
26. CRAT ENSGALG00000037443 78 0.817 - - - - 0.817 - - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
27. ZNF236 ENSGALG00000013657 154 0.816 - - - - - 0.816 - - - - zinc finger protein 236 [Source:HGNC Symbol;Acc:HGNC:13028]
28. SYT10 ENSGALG00000012911 17 0.815 - - - - 0.815 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
29. HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 0.813 - - - - 0.813 - - - - - homer scaffolding protein 3, transcript variant X4
30. DEAF1 ENSGALG00000034225 439 0.81 - - - - 0.810 - - - - - DEAF1, transcription factor [Source:NCBI gene;Acc:423017]
31. ENSGALG00000024018 ENSGALG00000024018 37 0.81 - - - - 0.810 - - - - -
32. AANAT ENSGALG00000001955 23 0.809 - - - - 0.809 - - - - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
33. KLHL6 ENSGALG00000002263 308 0.808 - - - - 0.808 - - - - - kelch like family member 6 [Source:NCBI gene;Acc:424762]
34. GLB1L ENSGALG00000011328 223 0.8 - - - - 0.800 - - - - - galactosidase beta 1 like [Source:HGNC Symbol;Acc:HGNC:28129]
35. HOOK3 ENSGALG00000015390 992 0.796 - - - - - 0.796 - - - - hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
36. ENGASE ENSGALG00000011816 1763 0.794 - - - - 0.794 - - - - - endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:HGNC:24622]
37. E4F1 ENSGALG00000005900 1814 0.793 - - - - - 0.793 - - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
38. FIGN ENSGALG00000011069 311 0.791 - - - - 0.791 - - - - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]
39. SERPINB1 ENSGALG00000019555 29 0.789 - - - - - 0.789 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
40. LOC415478 ENSGALG00000021171 100 0.788 - - - - - 0.788 - - - - transmembrane protein 2-like, transcript variant X2
41. ENSGALG00000028863 ENSGALG00000028863 665 0.788 - - - - 0.788 - - - - -
42. GDE1 ENSGALG00000006916 1040 0.787 - - - - - 0.787 - - - - glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]
43. FRS2 ENSGALG00000009966 63 0.787 - - - - 0.787 - - - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
44. DINB1 DINB1 113 0.786 - - - - 0.786 - - - - -
45. ENSGALG00000014545 ENSGALG00000014545 285 0.778 - - - - - 0.778 - - - -
46. TCEA3 1423 0.775 - - - - - 0.775 - - - - transcription elongation factor A3, transcript variant X2
47. MARVELD3 ENSGALG00000012886 155 0.775 - - - - 0.775 - - - - - MARVEL domain containing 3
48. SERPINF2 ENSGALG00000002987 236 0.774 - - - - - 0.774 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
49. NAIF1 ENSGALG00000027734 1551 0.773 - - - - 0.773 - - - - - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
50. RPP30 ENSGALG00000006486 1767 0.773 - - - - - - 0.773 - - - ribonuclease P/MRP subunit p30 [Source:HGNC Symbol;Acc:HGNC:17688]
51. MUL1 ENSGALG00000042761 1312 0.772 - - - - 0.772 - - - - - mitochondrial E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:25762]
52. SIRT5 ENSGALG00000012692 3196 0.765 - - - - 0.765 - - - - - sirtuin 5 [Source:NCBI gene;Acc:420834]
53. BARD1 ENSGALG00000003484 955 0.764 - - - - 0.764 - - - - - BRCA1 associated RING domain 1 [Source:NCBI gene;Acc:424010]
54. SLC35C1 ENSGALG00000008438 486 0.764 - - - - 0.764 - - - - - solute carrier family 35 member C1 [Source:NCBI gene;Acc:423203]
55. ELAVL1 ENSGALG00000000726 718 0.761 - - - - - 0.761 - - - - ELAV like RNA binding protein 1 [Source:NCBI gene;Acc:395637]
56. NSDHL ENSGALG00000007493 3126 0.761 - - - - - - - 0.761 - - NAD(P) dependent steroid dehydrogenase-like [Source:HGNC Symbol;Acc:HGNC:13398]
57. PRRG4 ENSGALG00000012032 96 0.759 - - - - 0.759 - - - - - proline rich and Gla domain 4 [Source:NCBI gene;Acc:421600]
58. CCDC171 ENSGALG00000015103 349 0.758 - - - - - 0.758 - - - - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
59. GMEB1 ENSGALG00000038488 158 0.757 - - - - - 0.757 - - - - glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370]
60. CEP89 ENSGALG00000004756 282 0.757 - - - - 0.757 - - - - - centrosomal protein 89 [Source:HGNC Symbol;Acc:HGNC:25907]
61. GUF1 ENSGALG00000014217 211 0.755 - - - - 0.755 - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
62. MYD88 ENSGALG00000005947 2055 0.752 - - - - - - - 0.752 - - myeloid differentiation primary response 88 [Source:NCBI gene;Acc:420420]
63. SMOC2 ENSGALG00000011205 340 0.751 - - - - - 0.751 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
64. ENSGALG00000028221 ENSGALG00000028221 1663 0.75 - - - - 0.750 - - - - -
65. MYO9B ENSGALG00000003717 746 0.749 - - - - 0.749 - - - - - myosin IXB [Source:NCBI gene;Acc:420135]
66. FAAH2 ENSGALG00000028084 1605 0.749 - - - - - - 0.749 - - - fatty acid amide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:26440]
67. ENSGALG00000001398 ENSGALG00000001398 3248 0.747 - - - - 0.747 - - - - -
68. RAD51B ENSGALG00000009491 199 0.746 - - - - - - 0.746 - - - RAD51 paralog B [Source:HGNC Symbol;Acc:HGNC:9822]
69. CTTN ENSGALG00000007700 709 0.744 - - - - - - 0.744 - - - cortactin [Source:NCBI gene;Acc:396455]
70. LIMK1 ENSGALG00000001076 1931 0.743 - - - - 0.743 - - - - - LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
71. TMEM135 2283 0.742 - - - - - 0.742 - - - - transmembrane protein 135, transcript variant X4
72. RAB30 ENSGALG00000017248 359 0.741 - - - - 0.741 - - - - - RAB30, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9770]
73. KIF3B ENSGALG00000006604 2968 0.74 - - - - 0.740 - - - - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
74. ARMC1 ENSGALG00000036567 5476 0.739 - - - - 0.739 - - - - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
75. METTL25 1538 0.739 - - - - - - - 0.739 - - methyltransferase like 25, transcript variant X1
76. MORN4 ENSGALG00000006149 7772 0.738 - - - - - - - 0.738 - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
77. ACVR2A ENSGALG00000012444 324 0.737 - - - - 0.737 - - - - - activin A receptor type 2A [Source:NCBI gene;Acc:396324]
78. GRIK1 ENSGALG00000015835 297 0.737 - - - - - 0.737 - - - - glutamate ionotropic receptor kainate type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4579]
79. LETM1 ENSGALG00000015706 2366 0.737 - - - - - - - 0.737 - - leucine zipper and EF-hand containing transmembrane protein 1 [Source:NCBI gene;Acc:422898]
80. COX7C ENSGALG00000027963 84312 0.737 - - - - - 0.737 - - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
81. FGD4 ENSGALG00000012932 50 0.736 - - - - - 0.736 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
82. CBX8 ENSGALG00000026548 1063 0.733 - - - - - 0.733 - - - - chromobox 8 [Source:HGNC Symbol;Acc:HGNC:15962]
83. HSF3 ENSGALG00000040662 140 0.732 - - - - 0.732 - - - - - Heat shock factor protein 3 [Source:NCBI gene;Acc:422169]
84. SNX29 ENSGALG00000039855 676 0.731 - - - - - - - 0.731 - - sorting nexin 29 [Source:HGNC Symbol;Acc:HGNC:30542]
85. TCEANC ENSGALG00000016581 948 0.731 - - - - 0.731 - - - - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
86. CNP ENSGALG00000003457 191 0.729 - - - - 0.729 - - - - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:NCBI gene;Acc:395921]
87. GEMIN5 ENSGALG00000003937 1685 0.728 - - - - - 0.728 - - - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
88. DBT ENSGALG00000005280 2893 0.727 - - - - - 0.727 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
89. ORC3 ENSGALG00000015800 4316 0.726 - - - - - - - 0.726 - - origin recognition complex subunit 3 [Source:NCBI gene;Acc:421822]
90. RAB21 ENSGALG00000010183 7718 0.726 - - - - - - - 0.726 - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
91. DNAJC27 ENSGALG00000028967 1127 0.726 - - - - 0.726 - - - - - DnaJ heat shock protein family (Hsp40) member C27 [Source:NCBI gene;Acc:402783]
92. KAT6B ENSGALG00000005035 301 0.725 - - - - 0.725 - - - - - lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
93. UAP1 ENSGALG00000002725 3016 0.725 - - - - - - - - 0.725 - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:HGNC:12457]
94. EVC2 ENSGALG00000015029 51 0.724 - - - - - 0.724 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
95. TMEM64 ENSGALG00000042599 859 0.723 - - - - 0.723 - - - - - transmembrane protein 64 [Source:HGNC Symbol;Acc:HGNC:25441]
96. MDN1 ENSGALG00000015733 2352 0.722 - - - - - 0.722 - - - - midasin AAA ATPase 1, transcript variant X1
97. PCSK5 ENSGALG00000033256 674 0.721 - - - - - 0.721 - - - - proprotein convertase subtilisin/kexin type 5 [Source:HGNC Symbol;Acc:HGNC:8747]
98. RASL11B ENSGALG00000013948 201 0.72 - - - - - 0.720 - - - - RAS like family 11 member B [Source:HGNC Symbol;Acc:HGNC:23804]
99. FAM177A1 ENSGALG00000010046 4318 0.716 - - - - - 0.716 - - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
100. OAT ENSGALG00000031158 10249 0.716 - - - - - 0.716 - - - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]

There are 23 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA