Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ME1

Gene Name Gene ID Reads Annotation
ME1 ENSGALG00000015849 1169 malic enzyme 1 [Source:NCBI gene;Acc:374189]











Genes with expression patterns similar to ME1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ME1 ENSGALG00000015849 1169 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 malic enzyme 1 [Source:NCBI gene;Acc:374189]
2. C3H6ORF203 ENSGALG00000015316 513 0.865 - - - - - - - 0.865 - - chromosome 3 open reading frame, human C6orf203 [Source:NCBI gene;Acc:421779]
3. gga-mir-454 ENSGALG00000033526 22 0.854 - - - 0.854 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
4. RFESD ENSGALG00000014673 198 0.853 - - - 0.853 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
5. TRIT1 ENSGALG00000003851 1518 0.853 - - - - - - - - 0.853 - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
6. MGP ENSGALG00000011740 978 0.851 - - - - - - - 0.851 - - matrix Gla protein [Source:NCBI gene;Acc:395912]
7. ZDHHC8 ENSGALG00000002124 35 0.85 - - - 0.850 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
8. CP ENSGALG00000030773 119 0.849 - - - 0.849 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
9. NUP160 ENSGALG00000043074 46 0.849 - - - 0.849 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
10. TRAF2 ENSGALG00000042838 24 0.848 - - - 0.848 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
11. OXGR1 ENSGALG00000016891 13 0.848 - - - 0.848 - - - - - - oxoglutarate receptor 1
12. ZPBP2 ENSGALG00000013484 14 0.847 - - - 0.847 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
13. WDSUB1 ENSGALG00000012574 2038 0.847 - - - - - - - 0.847 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
14. HTR1E ENSGALG00000015826 11 0.847 - - - 0.847 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
15. FMO3 ENSGALG00000040573 26 0.844 - - - - - - - 0.844 - - flavin containing monooxygenase 3 [Source:NCBI gene;Acc:395267]
16. NCOA3 ENSGALG00000004570 243 0.843 - - - - - - - - 0.843 - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
17. ENSGALG00000028652 ENSGALG00000028652 65 0.843 - - - 0.843 - - - - - -
18. MTERFD3 MTERFD3 20 0.841 - - - 0.841 - - - - - -
19. BEGAIN ENSGALG00000011236 35 0.84 - - - 0.840 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
20. RGS16 ENSGALG00000033535 139 0.835 - - - 0.835 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
21. PPIE ENSGALG00000013383 3923 0.834 - - - - - - - 0.834 - - peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]
22. NUDT8 460 0.834 - - - - - - - - 0.834 - nudix hydrolase 8
23. VEPH1 ENSGALG00000009682 51 0.834 - - - 0.834 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
24. ACOX2 ENSGALG00000007132 47 0.832 - - - 0.832 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
25. OTUD7B ENSGALG00000013348 38 0.827 - - - 0.827 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
26. GSTCD ENSGALG00000010573 1409 0.824 - - - - - - - - 0.824 - glutathione S-transferase C-terminal domain containing [Source:HGNC Symbol;Acc:HGNC:25806]
27. KITLG ENSGALG00000011206 71 0.824 - - - 0.824 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
28. OGDHL ENSGALG00000002266 57 0.822 - - - 0.822 - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
29. LACE1 LACE1 74 0.82 - - - - - - - - 0.820 -
30. PGPEP1 ENSGALG00000042080 169 0.818 - - - - - - - 0.818 - - pyroglutamyl-peptidase I [Source:HGNC Symbol;Acc:HGNC:13568]
31. SLC41A3 ENSGALG00000034289 1414 0.814 - - - - - - - - 0.814 - solute carrier family 41 member 3 [Source:HGNC Symbol;Acc:HGNC:31046]
32. KCTD17 ENSGALG00000042419 90 0.812 - - - 0.812 - - - - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
33. CFI ENSGALG00000012126 20 0.809 - - - - - - - 0.809 - - complement factor I [Source:NCBI gene;Acc:428773]
34. SMCR8 ENSGALG00000024082 44 0.807 - - - 0.807 - - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
35. NLGN4 NLGN4 283 0.804 - - - 0.804 - - - - - -
36. MATN2 44 0.8 - - - 0.800 - - - - - - matrilin 2, transcript variant X9
37. AP1AR ENSGALG00000028807 2398 0.8 - - - - - - - - 0.800 - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
38. COQ10B ENSGALG00000038440 735 0.795 - - - - - - - 0.795 - - coenzyme Q10B [Source:HGNC Symbol;Acc:HGNC:25819]
39. CSTB ENSGALG00000014410 7346 0.793 - - - - - - - 0.793 - - cystatin B [Source:NCBI gene;Acc:418267]
40. TXLNG ENSGALG00000016547 503 0.792 - - - 0.792 - - - - - - taxilin gamma [Source:HGNC Symbol;Acc:HGNC:18578]
41. ENSGALG00000024035 ENSGALG00000024035 544 0.792 - - - 0.792 - - - - - -
42. CTTNBP2NL ENSGALG00000026182 2231 0.792 - - - 0.792 - - - - - - CTTNBP2 N-terminal like [Source:HGNC Symbol;Acc:HGNC:25330]
43. NDE1 ENSGALG00000032590 3277 0.791 - - - 0.791 - - - - - - nudE neurodevelopment protein 1 [Source:NCBI gene;Acc:416597]
44. MFF ENSGALG00000003079 5289 0.791 - - - 0.791 - - - - - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
45. ENSGALG00000021611 ENSGALG00000021611 1551 0.791 - - - - - - - - 0.791 -
46. CYP4A22 ENSGALG00000020688 741 0.79 - - - 0.790 - - - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
47. NMI ENSGALG00000012480 2172 0.79 - - - - - - - 0.790 - - N-myc and STAT interactor [Source:HGNC Symbol;Acc:HGNC:7854]
48. VPS13B 2293 0.79 - - - - - - - - 0.790 - vacuolar protein sorting 13 homolog B
49. USP8 ENSGALG00000005894 4499 0.79 - - - - - - - 0.790 - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
50. ARHGEF5 ENSGALG00000017276 32 0.786 - - - 0.786 - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
51. ENSGALG00000025733 ENSGALG00000025733 197 0.786 - - - 0.786 - - - - - -
52. PYURF ENSGALG00000039869 5657 0.785 - - - 0.785 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
53. ELMO3 ENSGALG00000030220 375 0.78 - - - - - - - - 0.780 - engulfment and cell motility 3 [Source:NCBI gene;Acc:100857533]
54. ADAMTS2 ENSGALG00000032974 141 0.778 - - - - - - - 0.778 - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
55. PCIF1 ENSGALG00000023547 867 0.778 - - - - - - - 0.778 - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
56. FAM185A ENSGALG00000008301 754 0.778 - - - 0.778 - - - - - - family with sequence similarity 185 member A [Source:HGNC Symbol;Acc:HGNC:22412]
57. MAPK8IP3 ENSGALG00000029514 57 0.778 - - - - - - - - 0.778 - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
58. NUAK1 ENSGALG00000012662 411 0.777 - - - 0.777 - - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
59. SNRK ENSGALG00000039920 174 0.777 - - - - - - - - 0.777 - SNF related kinase [Source:NCBI gene;Acc:420675]
60. C14orf79 C14orf79 401 0.777 - - - - - - - - 0.777 -
61. KIAA0408 ENSGALG00000030211 934 0.774 - - - - - - - - 0.774 - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
62. GEM ENSGALG00000032506 439 0.773 - - - - - - - 0.773 - - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
63. TNFAIP2 ENSGALG00000011446 32 0.773 - - - 0.773 - - - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
64. PTPN9 ENSGALG00000001664 2309 0.772 - - - 0.772 - - - - - - protein tyrosine phosphatase, non-receptor type 9 [Source:NCBI gene;Acc:415308]
65. NOTCH1 ENSGALG00000002375 726 0.772 - - - 0.772 - - - - - - notch 1 [Source:NCBI gene;Acc:395655]
66. ZNF143 ENSGALG00000005787 345 0.771 - - - 0.771 - - - - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
67. RAB22A ENSGALG00000007554 201 0.77 - - - 0.770 - - - - - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
68. TMEM177 ENSGALG00000011593 311 0.77 - - - 0.770 - - - - - - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
69. MYCT1 ENSGALG00000013603 44 0.768 - - - - - - - 0.768 - - MYC target 1 [Source:HGNC Symbol;Acc:HGNC:23172]
70. RBP4 ENSGALG00000015374 122 0.768 - - - - - - - 0.768 - - retinol binding protein 4 [Source:NCBI gene;Acc:396454]
71. CCNE2 ENSGALG00000040794 1229 0.767 - - - - - - - - 0.767 - cyclin E2 [Source:NCBI gene;Acc:420231]
72. TRADD ENSGALG00000003195 1103 0.766 - - - - - - - - 0.766 - TNFRSF1A associated via death domain [Source:HGNC Symbol;Acc:HGNC:12030]
73. SBF2 ENSGALG00000005716 134 0.765 - - - 0.765 - - - - - - SET binding factor 2 [Source:NCBI gene;Acc:423043]
74. SMG7 ENSGALG00000004667 707 0.764 - - - 0.764 - - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
75. ATR ENSGALG00000002663 4626 0.763 - - - - - - - - 0.763 - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
76. TMEM69 ENSGALG00000010279 716 0.763 - - - 0.763 - - - - - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
77. TCP11L2 ENSGALG00000012658 1671 0.762 - - - - - - - - 0.762 - t-complex 11 like 2 [Source:NCBI gene;Acc:425052]
78. RUNDC3B ENSGALG00000008954 924 0.762 - - - - - - - - 0.762 - RUN domain containing 3B [Source:NCBI gene;Acc:420535]
79. GOPC ENSGALG00000014902 352 0.761 - - - 0.761 - - - - - - golgi associated PDZ and coiled-coil motif containing, transcript variant X2
80. MAP4 36 0.76 - - - - - - - - 0.760 - microtubule associated protein 4, transcript variant X12
81. TAOK1 ENSGALG00000004082 77 0.755 - - - 0.755 - - - - - - TAO kinase 1 [Source:HGNC Symbol;Acc:HGNC:29259]
82. IARS ENSGALG00000004813 12936 0.753 - - - - - - - - 0.753 - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
83. LRP2 ENSGALG00000010858 363 0.753 - - - 0.753 - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
84. GPATCH2 ENSGALG00000009627 4061 0.753 - - - - - - - - 0.753 - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
85. CACNA2D2 ENSGALG00000038242 2078 0.752 - - - - - - - 0.752 - - calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
86. ENSGALG00000012451 ENSGALG00000012451 7912 0.749 - - - - - - - - 0.749 -
87. ANKRD9 ENSGALG00000011376 525 0.749 - - - 0.749 - - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
88. ADAMTS19 ENSGALG00000000151 3217 0.748 - - - 0.748 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 19 [Source:HGNC Symbol;Acc:HGNC:17111]
89. CBX1 ENSGALG00000033926 2436 0.748 - - - - - - - - 0.748 - chromobox 1 [Source:NCBI gene;Acc:374237]
90. FGF12 ENSGALG00000036971 2631 0.747 - - - - - - - - 0.747 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
91. PCDH9 ENSGALG00000016908 788 0.746 - - - 0.746 - - - - - - protocadherin 9, transcript variant X1
92. SCARF2 ENSGALG00000034560 6945 0.746 - - - - - - - 0.746 - - scavenger receptor class F member 2 [Source:HGNC Symbol;Acc:HGNC:19869]
93. ENSGALG00000025895 ENSGALG00000025895 69 0.745 - - - 0.745 - - - - - -
94. FTSJ2 FTSJ2 2951 0.745 - - - - - - - - 0.745 -
95. ADARB2 ENSGALG00000006797 103 0.744 - - - - - - - - - 0.744 adenosine deaminase, RNA specific B2 (inactive) [Source:HGNC Symbol;Acc:HGNC:227]
96. AP3B1 ENSGALG00000004390 387 0.743 - - - 0.743 - - - - - - adaptor related protein complex 3 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:566]
97. TGFBI ENSGALG00000029429 2306 0.743 - - - - - - - 0.743 - - transforming growth factor beta induced [Source:NCBI gene;Acc:395897]
98. GLRX ENSGALG00000027483 217 0.742 - - - - - - - - 0.742 - glutaredoxin [Source:NCBI gene;Acc:396069]
99. CBR1 ENSGALG00000016027 619 0.741 - - - 0.741 - - - - - - carbonyl reductase 1 [Source:NCBI gene;Acc:418512]
100. HPD ENSGALG00000004343 244 0.741 - - - - - - - 0.741 - - 4-hydroxyphenylpyruvate dioxygenase [Source:NCBI gene;Acc:416852]

There are 78 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA