Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LSS

Gene Name Gene ID Reads Annotation
LSS ENSGALG00000006198 318 lanosterol synthase [Source:NCBI gene;Acc:424037]











Genes with expression patterns similar to LSS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LSS ENSGALG00000006198 318 4 - 1.000 1.000 - - 1.000 - - - 1.000 lanosterol synthase [Source:NCBI gene;Acc:424037]
2. CXorf36 ENSGALG00000016215 108 0.947 - - - - - 0.947 - - - - chromosome X open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:25866]
3. NIT2 ENSGALG00000015275 278 0.898 - - - - - 0.898 - - - - nitrilase family member 2 [Source:HGNC Symbol;Acc:HGNC:29878]
4. ENSGALG00000018479 ENSGALG00000018479 10 0.876 - - - - - 0.876 - - - -
5. BICD1 ENSGALG00000012934 112 0.867 - - - - - 0.867 - - - - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
6. FAM160A2 ENSGALG00000003416 23 0.849 - - 0.849 - - - - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
7. CSF2RA ENSGALG00000016693 5 0.841 - - - - - - - - - 0.841 colony stimulating factor 2 receptor alpha subunit [Source:NCBI gene;Acc:418666]
8. CAMKK1 ENSGALG00000001617 64 0.837 - - - - - 0.837 - - - - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
9. OSBPL10 45 0.83 - - - - - 0.830 - - - - oxysterol binding protein like 10
10. MFHAS1 ENSGALG00000011444 7 0.828 - - 0.828 - - - - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
11. BRN3 BRN3 52 0.82 - - - - - 0.820 - - - -
12. ENSGALG00000026735 ENSGALG00000026735 5 0.806 - - - - - - - - - 0.806
13. C18H17ORF67 ENSGALG00000024428 10 0.795 - - - - - 0.795 - - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
14. CDK19 ENSGALG00000015051 26 0.795 - - - - - 0.795 - - - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
15. AOC1 13 0.795 - - - - - 0.795 - - - - amine oxidase, copper containing 1, transcript variant X2
16. PLEKHH1 ENSGALG00000009507 18 0.795 - - - - - 0.795 - - - - pleckstrin homology, MyTH4 and FERM domain containing H1 [Source:HGNC Symbol;Acc:HGNC:17733]
17. MYL2 ENSGALG00000004582 2245 0.795 - - - - - 0.795 - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
18. ENSGALG00000006114 ENSGALG00000006114 1 0.795 - - - - - 0.795 - - - -
19. ZHX1 ENSGALG00000034999 21 0.795 - - - - - 0.795 - - - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
20. ABCG5 ENSGALG00000009955 4 0.795 - - - - - 0.795 - - - - ATP binding cassette subfamily G member 5 [Source:HGNC Symbol;Acc:HGNC:13886]
21. SH3BP5 ENSGALG00000039337 17 0.795 - - - - - 0.795 - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
22. GRAMD2 GRAMD2 3 0.795 - - - - - 0.795 - - - -
23. PHF21B ENSGALG00000014218 10 0.795 - - - - - 0.795 - - - - PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
24. LOC416622 ENSGALG00000007030 30 0.795 - - - - - 0.795 - - - - transmembrane protein 180-like, transcript variant X8
25. OVST ENSGALG00000011930 2 0.795 - - - - - 0.795 - - - - ovostatin [Source:NCBI gene;Acc:396151]
26. DAPK2 ENSGALG00000003336 3 0.795 - - - - - 0.795 - - - - death associated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:2675]
27. YIPF7 ENSGALG00000014221 5 0.795 - - - - - 0.795 - - - - Yip1 domain family member 7 [Source:NCBI gene;Acc:422774]
28. NEK9 ENSGALG00000010314 6 0.795 - - - - - 0.795 - - - - NIMA related kinase 9 [Source:HGNC Symbol;Acc:HGNC:18591]
29. KLF15 ENSGALG00000036133 3 0.795 - - - - - 0.795 - - - - Kruppel like factor 15 [Source:HGNC Symbol;Acc:HGNC:14536]
30. TMC6 ENSGALG00000038875 6 0.795 - - - - - 0.795 - - - - transmembrane channel like 6 [Source:HGNC Symbol;Acc:HGNC:18021]
31. LPGAT1 ENSGALG00000009848 33 0.795 - - - - - 0.795 - - - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
32. SS1R SS1R 3 0.795 - - - - - 0.795 - - - -
33. GIPR 1 0.795 - - - - - 0.795 - - - - gastric inhibitory polypeptide receptor
34. DFNB59 ENSGALG00000023439 4 0.795 - - - - - 0.795 - - - - deafness, autosomal recessive 59, transcript variant X1
35. SOWAHB 1 0.795 - - - - - 0.795 - - - - sosondowah ankyrin repeat domain family member B
36. ENSGALG00000015324 ENSGALG00000015324 10 0.795 - - - - - 0.795 - - - -
37. NCEH1 ENSGALG00000009170 8 0.795 - - - - - 0.795 - - - - neutral cholesterol ester hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:29260]
38. GPR143 ENSGALG00000016615 14 0.79 - - - - - 0.790 - - - - G protein-coupled receptor 143 [Source:NCBI gene;Acc:418652]
39. C1QTNF2 ENSGALG00000027232 42 0.788 - - - - - 0.788 - - - - C1q and tumor necrosis factor related protein 2 [Source:NCBI gene;Acc:416156]
40. CLSTN2 ENSGALG00000037387 23 0.788 - - - - - 0.788 - - - - calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]
41. AQP12 AQP12 11 0.785 - - - - - - - - - 0.785
42. LPP ENSGALG00000007337 18 0.785 - - - - - - - - - 0.785 LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
43. ADPRH ENSGALG00000015473 7 0.783 - - - - - 0.783 - - - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
44. ENSGALG00000021386 ENSGALG00000021386 29 0.779 - - - - - 0.779 - - - -
45. AQP3 ENSGALG00000002452 97 0.77 - - - - - 0.770 - - - - aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
46. IL22RA1 ENSGALG00000004221 71 0.77 - - - - - 0.770 - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
47. LPAR6 ENSGALG00000016998 36 0.769 - - - - - 0.769 - - - - lysophosphatidic acid receptor 6 [Source:NCBI gene;Acc:396118]
48. PPARG ENSGALG00000004974 62 0.753 - - - - - - - - - 0.753 peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
49. VWC2 ENSGALG00000013081 492 0.751 - - - - - 0.751 - - - - von Willebrand factor C domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30200]
50. TMEM117 ENSGALG00000009596 48 0.75 - - 0.750 - - - - - - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
51. INADL INADL 51 0.742 - - - - - 0.742 - - - -
52. NBEAL1 ENSGALG00000008786 104 0.741 - - - - - 0.741 - - - - neurobeachin like 1 [Source:HGNC Symbol;Acc:HGNC:20681]
53. SNORD79 SNORD79 12 0.741 - - - - - 0.741 - - - -
54. IL-12B IL-12B 14 0.74 - - - - - 0.740 - - - -
55. ALPK3 ENSGALG00000037950 54 0.74 - - - - - 0.740 - - - - alpha kinase 3 [Source:HGNC Symbol;Acc:HGNC:17574]
56. SPINK4 ENSGALG00000043964 50 0.739 - - - - - 0.739 - - - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
57. STK32A ENSGALG00000029195 27 0.738 - - - - - 0.738 - - - - serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]
58. GIT1 ENSGALG00000023703 174 0.733 - - - - - 0.733 - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:NCBI gene;Acc:417584]
59. RC3H2 ENSGALG00000001253 18 0.729 - - 0.729 - - - - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
60. CHODL ENSGALG00000015720 3 0.724 - - - - - - - - - 0.724 chondrolectin [Source:HGNC Symbol;Acc:HGNC:17807]
61. ATP2C1 ENSGALG00000034340 32 0.718 - - - - - - - - - 0.718 ATPase secretory pathway Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:13211]
62. SYNPO ENSGALG00000027330 5 0.716 - - - - - 0.716 - - - - synaptopodin [Source:HGNC Symbol;Acc:HGNC:30672]
63. MFSD9 ENSGALG00000016792 40 0.714 - - - - - 0.714 - - - - major facilitator superfamily domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28158]
64. LOC769486 ENSGALG00000029144 20 0.708 - - - - - - - - - 0.708 scale keratin-like, transcript variant X1
65. FHDC1 ENSGALG00000041054 34 0.708 - - - - - - - - - 0.708 FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
66. MMP9 ENSGALG00000006992 78 0.708 - - - - - - - - - 0.708 matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
67. UBE4B ENSGALG00000002649 39 0.702 - - 0.702 - - - - - - - ubiquitination factor E4B [Source:HGNC Symbol;Acc:HGNC:12500]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA