Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRRC9

Gene Name Gene ID Reads Annotation
LRRC9 2 leucine rich repeat containing 9











Genes with expression patterns similar to LRRC9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRRC9 2 4 - - 1.000 1.000 - 1.000 - 1.000 - - leucine rich repeat containing 9
2. CCDC178 6 2 - - 1.000 - - 1.000 - - - - coiled-coil domain containing 178, transcript variant X3
3. PSEN2 ENSGALG00000009073 7 1.936 - - 0.936 - - 1.000 - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
4. GZMA ENSGALG00000013548 22 1.898 - - - - - 1.000 - 0.898 - - granzyme A [Source:NCBI gene;Acc:395108]
5. ENSGALG00000023638 ENSGALG00000023638 16 1.86 - - - 0.860 - 1.000 - - - -
6. CASS4 ENSGALG00000007744 10 1.822 - - 0.822 - - 1.000 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
7. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
8. DUPD1 ENSGALG00000005019 18 1 - - 1.000 - - - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
9. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
10. DLX1 ENSGALG00000018439 16 1 - - - 1.000 - - - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
11. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
12. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
13. SH3BP5 ENSGALG00000039337 17 1 - - - 1.000 - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
14. ENSGALG00000011411 ENSGALG00000011411 1 1 - - 1.000 - - - - - - -
15. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
16. ENSGALG00000028137 ENSGALG00000028137 2 1 - - 1.000 - - - - - - -
17. PLEK ENSGALG00000008756 1 1 - - - 1.000 - - - - - - pleckstrin [Source:NCBI gene;Acc:395669]
18. CCDC33 7 1 - - - 1.000 - - - - - - coiled-coil domain containing 33, transcript variant X2
19. SMYD3 ENSGALG00000010653 14 1 - - - 1.000 - - - - - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
20. KCNK10 ENSGALG00000010598 7 1 - - - 1.000 - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
21. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
22. CNTNAP4 ENSGALG00000023179 13 1 - - 1.000 - - - - - - - contactin associated protein like 4
23. ZNF770 ENSGALG00000009817 27 1 - - 1.000 - - - - - - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
24. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
25. CRYGS ENSGALG00000006574 9 1 - - 1.000 - - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
26. NOS2 ENSGALG00000038096 7 1 - - 1.000 - - - - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
27. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
28. BFIV21 BFIV21 30 1 - - 1.000 - - - - - - -
29. ODF2L ENSGALG00000006804 10 1 - - 1.000 - - - - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
30. DLL4 ENSGALG00000008514 3 1 - - 1.000 - - - - - - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
31. TRPM8 ENSGALG00000004116 2 1 - - - 1.000 - - - - - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
32. METTL21C ENSGALG00000016864 0 1 - - - 1.000 - - - - - - methyltransferase like 21C [Source:HGNC Symbol;Acc:HGNC:33717]
33. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
34. IL5RA ENSGALG00000008267 7 1 - - - 1.000 - - - - - - interleukin 5 receptor subunit alpha [Source:NCBI gene;Acc:771801]
35. SYT12 ENSGALG00000004306 2 1 - - 1.000 - - - - - - - synaptotagmin 12 [Source:NCBI gene;Acc:422998]
36. SNORD61 SNORD61 12 1 - - - - - 1.000 - - - -
37. PDE6B ENSGALG00000015373 1 1 - - 1.000 - - - - - - - Gallus gallus phosphodiesterase 6B (PDE6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318440]
38. ENSGALG00000028957 ENSGALG00000028957 7 1 - - 1.000 - - - - - - -
39. TOR1AIP2 ENSGALG00000004017 2 1 - - 1.000 - - - - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
40. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
41. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
42. ARHGEF17 6 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 17
43. GABRG1 ENSGALG00000020143 5 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
44. COL28A1 ENSGALG00000010259 0 1 - - - 1.000 - - - - - - collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442]
45. VPS9D1 ENSGALG00000023468 1 1 - - - - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
46. TMEM204 ENSGALG00000029047 8 1 - - - 1.000 - - - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
47. CHIC2 ENSGALG00000013931 21 1 - - 1.000 - - - - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
48. FAXC ENSGALG00000015489 0 1 - - - 1.000 - - - - - - failed axon connections homolog [Source:HGNC Symbol;Acc:HGNC:20742]
49. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
50. GPR132 ENSGALG00000027407 9 1 - - - 1.000 - - - - - - G protein-coupled receptor 132, transcript variant X2
51. AMOTL1 ENSGALG00000017208 5 1 - - 1.000 - - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
52. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
53. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
54. WDR17 ENSGALG00000043106 4 1 - - - 1.000 - - - - - - WD repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:16661]
55. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
56. TFAP4 ENSGALG00000027823 12 1 - - 1.000 - - - - - - - transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]
57. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
58. ATP6V1C2 ENSGALG00000016446 3 1 - - 1.000 - - - - - - - ATPase H+ transporting V1 subunit C2 [Source:HGNC Symbol;Acc:HGNC:18264]
59. CALN1 ENSGALG00000001122 0 1 - - - 1.000 - - - - - - calneuron 1 [Source:HGNC Symbol;Acc:HGNC:13248]
60. BARL ENSGALG00000002170 4 1 - - - 1.000 - - - - - - bile acid receptor-like, transcript variant X2
61. TMEM56 ENSGALG00000005580 10 1 - - 1.000 - - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
62. FAM173B ENSGALG00000013043 4 1 - - - 1.000 - - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
63. PTPN3 ENSGALG00000022909 6 1 - - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
64. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
65. SNORD53 SNORD53 1 1 - - 1.000 - - - - - - -
66. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
67. ARHGEF38 ENSGALG00000010577 1 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 38, transcript variant X1
68. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - 1.000 - - - - - -
69. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
70. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
71. KCNAB2 ENSGALG00000037241 1 1 - - 1.000 - - - - - - - potassium voltage-gated channel subfamily A regulatory beta subunit 2 [Source:HGNC Symbol;Acc:HGNC:6229]
72. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
73. HIVEP3 ENSGALG00000027365 10 1 - - 1.000 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:HGNC:13561]
74. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
75. ENSGALG00000023409 ENSGALG00000023409 0 1 - - - 1.000 - - - - - -
76. SI ENSGALG00000009511 5 1 - - 1.000 - - - - - - - sucrase-isomaltase
77. RAB44 ENSGALG00000000544 6 1 - - 1.000 - - - - - - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
78. SLC25A38 ENSGALG00000041275 1 1 - - 1.000 - - - - - - - solute carrier family 25 member 38 [Source:HGNC Symbol;Acc:HGNC:26054]
79. MADCAM1 ENSGALG00000028341 6 1 - - 1.000 - - - - - - - mucosal vascular addressin cell adhesion molecule 1
80. ZDHHC1 ENSGALG00000002091 3 1 - - - 1.000 - - - - - - zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
81. NGB ENSGALG00000010413 0 1 - - - - - 1.000 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
82. LEPR ENSGALG00000011058 4 1 - - - 1.000 - - - - - - leptin receptor [Source:NCBI gene;Acc:374223]
83. TSNAXIP1 ENSGALG00000001533 9 1 - - 1.000 - - - - - - - translin associated factor X interacting protein 1, transcript variant X2
84. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
85. VANGL2 ENSGALG00000030643 3 1 - - 1.000 - - - - - - - VANGL planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:15511]
86. ACKR4 ENSGALG00000041491 7 1 - - 1.000 - - - - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
87. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
88. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
89. CLDN16 ENSGALG00000025821 14 1 - - - - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
90. MFSD4 MFSD4 1 1 - - 1.000 - - - - - - -
91. ENSGALG00000006582 ENSGALG00000006582 8 1 - - 1.000 - - - - - - -
92. C2CD3 ENSGALG00000017314 13 1 - - 1.000 - - - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
93. ENSGALG00000025761 ENSGALG00000025761 6 1 - - 1.000 - - - - - - -
94. ALK 2 1 - - - - - 1.000 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
95. RGS13 ENSGALG00000026810 8 1 - - 1.000 - - - - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
96. MEIG1 ENSGALG00000000451 12 1 - - 1.000 - - - - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
97. GRHL2 ENSGALG00000037687 3 1 - - 1.000 - - - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
98. STAM2 ENSGALG00000012513 9 1 - - - - - 1.000 - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
99. THBD ENSGALG00000044442 6 1 - - - - - 1.000 - - - - thrombomodulin
100. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]

There are 207 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA