Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LGI1

Gene Name Gene ID Reads Annotation
LGI1 ENSGALG00000031720 287 leucine rich glioma inactivated 1 [Source:NCBI gene;Acc:423802]











Genes with expression patterns similar to LGI1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LGI1 ENSGALG00000031720 287 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 leucine rich glioma inactivated 1 [Source:NCBI gene;Acc:423802]
2. DSL1 DSL1 113 0.894 - - - - - - 0.894 - - -
3. PICALM ENSGALG00000039037 57 0.867 - - - - - - 0.867 - - - phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
4. BRSK2 ENSGALG00000006681 158 0.856 - - - - - - 0.856 - - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
5. GRIN1 ENSGALG00000008898 18 0.856 - - - - - - 0.856 - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
6. HMGCLL1 ENSGALG00000016294 33 0.856 - - - - - - 0.856 - - - 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
7. ADRA1D ENSGALG00000038787 54 0.856 - - - - - - 0.856 - - - adrenoceptor alpha 1D
8. LRP3 ENSGALG00000004853 13 0.844 - - - - - - 0.844 - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
9. GXYLT2 ENSGALG00000007804 670 0.844 - - - - - - 0.844 - - - glucoside xylosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:33383]
10. DNAH12 ENSGALG00000005601 80 0.842 - - - - - - 0.842 - - - dynein, axonemal, heavy chain 12, transcript variant X6
11. ENSGALG00000023694 ENSGALG00000023694 45 0.84 - - - - - - 0.840 - - -
12. SAMSN1 ENSGALG00000040926 88 0.84 - - - - - - 0.840 - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
13. CASR ENSGALG00000038405 53 0.84 - - - - - - 0.840 - - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
14. SI ENSGALG00000009511 5 0.837 - - - - - - 0.837 - - - sucrase-isomaltase
15. CA15L ENSGALG00000005896 4 0.837 - - - - - - 0.837 - - - carbonic anhydrase 15-like
16. ENSGALG00000028577 ENSGALG00000028577 4 0.837 - - - - - - 0.837 - - -
17. SLC6A11 ENSGALG00000004879 16 0.837 - - - - - - 0.837 - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
18. LEKR1 50 0.837 - - - - - - 0.837 - - - leucine, glutamate and lysine rich 1, transcript variant X17
19. NIM1 NIM1 18 0.837 - - - - - - 0.837 - - -
20. TEKT1 ENSGALG00000006064 18 0.837 - - - - - - 0.837 - - - tektin 1 [Source:HGNC Symbol;Acc:HGNC:15534]
21. BFSP1 ENSGALG00000008735 17 0.837 - - - - - - 0.837 - - - beaded filament structural protein 1 [Source:NCBI gene;Acc:396056]
22. ASB18 ENSGALG00000046564 7 0.837 - - - - - - 0.837 - - - ankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
23. ADAM11 ENSGALG00000035673 45 0.835 - - - - - - 0.835 - - - ADAM metallopeptidase domain 11 [Source:HGNC Symbol;Acc:HGNC:189]
24. Sep-08 Sep-08 162 0.834 - - - - - - 0.834 - - -
25. LHFPL5 ENSGALG00000039170 247 0.833 - - - - - - 0.833 - - - LHFPL tetraspan subfamily member 5 [Source:NCBI gene;Acc:378916]
26. SPTSSBL ENSGALG00000026131 70 0.83 - - - - - - 0.830 - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
27. SNTG1 ENSGALG00000015248 23 0.828 - - - - - - 0.828 - - - syntrophin gamma 1 [Source:HGNC Symbol;Acc:HGNC:13740]
28. MGMT ENSGALG00000042949 53 0.821 - - - - - - 0.821 - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
29. EFCAB2 ENSGALG00000028017 266 0.816 - - - - - - 0.816 - - - EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:HGNC:28166]
30. TRIM55 ENSGALG00000041327 1097 0.816 - - - - - - 0.816 - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
31. SLC7A5 ENSGALG00000005845 261 0.811 - - - - - - 0.811 - - - solute carrier family 7 member 5 [Source:NCBI gene;Acc:415832]
32. SLC6A13 ENSGALG00000012985 194 0.808 - - - - - - 0.808 - - - solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
33. CBX7 ENSGALG00000041236 14 0.803 - - - - - - 0.803 - - - chromobox 7 [Source:HGNC Symbol;Acc:HGNC:1557]
34. NME1 ENSGALG00000007305 152 0.802 - - - - - - 0.802 - - - NME/NM23 nucleoside diphosphate kinase 1 [Source:NCBI gene;Acc:422094]
35. INTU ENSGALG00000010170 78 0.8 - - - - - - 0.800 - - - inturned planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:29239]
36. SPAG6 ENSGALG00000007892 80 0.798 - - - - - - 0.798 - - - sperm associated antigen 6 [Source:NCBI gene;Acc:420505]
37. NAAA ENSGALG00000011529 401 0.796 - - - - - - 0.796 - - - N-acylethanolamine acid amidase [Source:HGNC Symbol;Acc:HGNC:736]
38. ZNF608 ENSGALG00000005016 273 0.794 - - - - - - 0.794 - - - zinc finger protein 608 [Source:HGNC Symbol;Acc:HGNC:29238]
39. DCX ENSGALG00000007993 335 0.79 - - - - - 0.790 - - - - doublecortin [Source:NCBI gene;Acc:374242]
40. EPB41 ENSGALG00000001329 787 0.79 - - - - - - 0.790 - - - erythrocyte membrane protein band 4.1 [Source:NCBI gene;Acc:396493]
41. ENSGALG00000017013 ENSGALG00000017013 286 0.789 - - - - - - 0.789 - - -
42. PAAF1 ENSGALG00000017318 605 0.787 - - - - - - 0.787 - - - proteasomal ATPase associated factor 1 [Source:NCBI gene;Acc:419061]
43. PIGG ENSGALG00000015349 314 0.785 - - - - - - 0.785 - - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
44. NLGN4 NLGN4 283 0.782 - - - - - - 0.782 - - -
45. TAGAP ENSGALG00000013747 34 0.781 - - - - - - 0.781 - - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
46. SLC38A1 ENSGALG00000009698 566 0.78 - - - - - - 0.780 - - - solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
47. CRIM1 ENSGALG00000032640 506 0.779 - - - - - - 0.779 - - - cysteine rich transmembrane BMP regulator 1 [Source:NCBI gene;Acc:395067]
48. UNC13C ENSGALG00000035935 120 0.778 - - - - - - 0.778 - - - unc-13 homolog C [Source:HGNC Symbol;Acc:HGNC:23149]
49. FOXP2 ENSGALG00000009424 101 0.776 - - - - - - 0.776 - - - forkhead box P2 [Source:HGNC Symbol;Acc:HGNC:13875]
50. GJB1 ENSGALG00000005541 261 0.775 - - - - - - 0.775 - - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
51. NLE1 ENSGALG00000004691, ENSGALG00000036963 1239 0.772 - - - - - - 0.772 - - - notchless homolog 1, transcript variant X1
52. DNAH5L ENSGALG00000013268 61 0.767 - - - - - - 0.767 - - - dynein axonemal heavy chain 5-like
53. ENSGALG00000018499 ENSGALG00000018499 100 0.766 - - - - - - 0.766 - - -
54. VEGFA ENSGALG00000010290 502 0.765 - - - - - 0.765 - - - - vascular endothelial growth factor A [Source:NCBI gene;Acc:395909]
55. EPM2A ENSGALG00000012275 872 0.765 - - - - - - 0.765 - - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
56. DBX2 ENSGALG00000009604 367 0.764 - - - - - - 0.764 - - - developing brain homeobox 2 [Source:NCBI gene;Acc:417801]
57. LRRIQ1 147 0.758 - - - - - - 0.758 - - - leucine rich repeats and IQ motif containing 1, transcript variant X2
58. AMY2A ENSGALG00000038740 102 0.756 - - - - - - 0.756 - - - amylase, alpha 2A (pancreatic) [Source:NCBI gene;Acc:414140]
59. ELF3 ENSGALG00000000616 217 0.756 - - - - - - 0.756 - - - E74 like ETS transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3318]
60. AMPD1 ENSGALG00000002082 228 0.753 - - - - - 0.753 - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
61. ENSGALG00000012332 ENSGALG00000012332 71 0.753 - - - - - - 0.753 - - -
62. PLCB1 ENSGALG00000008875 334 0.75 - - - - - - 0.750 - - - phospholipase C beta 1 [Source:HGNC Symbol;Acc:HGNC:15917]
63. WNK1 ENSGALG00000012992 67 0.749 - - - - - 0.749 - - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
64. ARSG ENSGALG00000004193 21 0.749 - - - - - 0.749 - - - - arylsulfatase G [Source:NCBI gene;Acc:771433]
65. PNPLA4 ENSGALG00000016618 142 0.748 - - - - - - 0.748 - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
66. RAMP1 ENSGALG00000003821 389 0.748 - - - - - - 0.748 - - - receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]
67. GABRA3 ENSGALG00000007269 985 0.748 - - - - - - 0.748 - - - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
68. RSPH9 ENSGALG00000010299 567 0.747 - - - - - - 0.747 - - - radial spoke head 9 homolog [Source:NCBI gene;Acc:421446]
69. CBLB ENSGALG00000015351 59 0.746 - - - - - - 0.746 - - - Cbl proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:1542]
70. XYLT1 ENSGALG00000006757 169 0.745 - - - - - - 0.745 - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
71. SCRIB ENSGALG00000032790 4 0.743 - - - - - 0.743 - - - - scribbled planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:30377]
72. FRS2 ENSGALG00000009966 63 0.743 - - - - - - 0.743 - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
73. CEP170B ENSGALG00000011639 71 0.742 - - - - - 0.742 - - - - centrosomal protein 170B, transcript variant X13
74. SLC35B3 ENSGALG00000012778 30 0.741 - - - - - - 0.741 - - - solute carrier family 35 member B3 [Source:HGNC Symbol;Acc:HGNC:21601]
75. FAM149A ENSGALG00000013503 72 0.739 - - - - - - 0.739 - - - family with sequence similarity 149 member A [Source:HGNC Symbol;Acc:HGNC:24527]
76. PIK3R1 ENSGALG00000014786 203 0.739 - - - - - - 0.739 - - - phosphoinositide-3-kinase regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:8979]
77. VAPA ENSGALG00000039455 1665 0.738 - - - - - - 0.738 - - - VAMP associated protein A, transcript variant X1
78. SPATA5L1 ENSGALG00000005682 240 0.736 - - - - - - 0.736 - - - spermatogenesis associated 5 like 1 [Source:HGNC Symbol;Acc:HGNC:28762]
79. NRIP3 ENSGALG00000005903 58 0.735 - - - - - - 0.735 - - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
80. PAK1 ENSGALG00000000681 1706 0.735 - - - - - - 0.735 - - - p21 (RAC1) activated kinase 1 [Source:NCBI gene;Acc:419083]
81. EFCAB12 EFCAB12 15 0.735 - - - - - 0.735 - - - -
82. CSRNP3 ENSGALG00000010971 539 0.734 - - - - - - 0.734 - - - cysteine and serine rich nuclear protein 3 [Source:HGNC Symbol;Acc:HGNC:30729]
83. IFNGR1 ENSGALG00000013865 345 0.732 - - - - - - 0.732 - - - interferon gamma receptor 1 [Source:NCBI gene;Acc:421685]
84. SLCO4C1 ENSGALG00000026768 30 0.73 - - - - - - 0.730 - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
85. SPECC1L ENSGALG00000006648 353 0.73 - - - - - - 0.730 - - - sperm antigen with calponin homology and coiled-coil domains 1 like [Source:NCBI gene;Acc:416950]
86. CRYD2 CRYD2 624 0.729 - - - - - - 0.729 - - -
87. MLH1 ENSGALG00000039169 19 0.728 - - - - - - 0.728 - - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
88. gga-mir-1306 ENSGALG00000025271 1231 0.726 - - - - - - 0.726 - - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
89. HELZ ENSGALG00000027152 757 0.723 - - - - - - 0.723 - - - helicase with zinc finger [Source:HGNC Symbol;Acc:HGNC:16878]
90. IQCD ENSGALG00000037307 642 0.722 - - - - - - 0.722 - - - IQ motif containing D, transcript variant X2
91. CGRRF1 ENSGALG00000012206 41 0.721 - - - - - 0.721 - - - - cell growth regulator with ring finger domain 1 [Source:HGNC Symbol;Acc:HGNC:15528]
92. PPARD ENSGALG00000002588 962 0.72 - - - - - - 0.720 - - - peroxisome proliferator activated receptor delta [Source:NCBI gene;Acc:395479]
93. FAAHL ENSGALG00000015059 1632 0.719 - - - - - - 0.719 - - - fatty acid amide hydrolase-like
94. PIP4K2B ENSGALG00000001610 49 0.719 - - - - - - 0.719 - - - phosphatidylinositol-5-phosphate 4-kinase type 2 beta [Source:HGNC Symbol;Acc:HGNC:8998]
95. EYA2 ENSGALG00000004508 939 0.716 - - - - - - 0.716 - - - Gallus gallus EYA transcriptional coactivator and phosphatase 2 (EYA2), mRNA. [Source:RefSeq mRNA;Acc:NM_204915]
96. OSBPL9 ENSGALG00000010555 395 0.716 - - - - - - 0.716 - - - oxysterol binding protein like 9 [Source:HGNC Symbol;Acc:HGNC:16386]
97. ZMYND10 ENSGALG00000035883 58 0.712 - - - - - - 0.712 - - - zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
98. FAM171B ENSGALG00000002646 837 0.712 - - - - - - 0.712 - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
99. FBXL5 ENSGALG00000014510 245 0.711 - - - - - - 0.711 - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
100. CHAT ENSGALG00000002289 26 0.708 - - - - - - - - - 0.708 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]

There are 12 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA