Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LETM1

Gene Name Gene ID Reads Annotation
LETM1 ENSGALG00000015706 2366 leucine zipper and EF-hand containing transmembrane protein 1 [Source:NCBI gene;Acc:422898]











Genes with expression patterns similar to LETM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LETM1 ENSGALG00000015706 2366 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine zipper and EF-hand containing transmembrane protein 1 [Source:NCBI gene;Acc:422898]
2. PANX2 ENSGALG00000000003 2185 1.463 - - 0.746 - - - - 0.717 - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
3. MORN4 ENSGALG00000006149 7772 0.838 - - - - - - - 0.838 - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
4. CBX8 ENSGALG00000026548 1063 0.822 - - 0.822 - - - - - - - chromobox 8 [Source:HGNC Symbol;Acc:HGNC:15962]
5. LSG1 ENSGALG00000007058 4591 0.812 - - - - - - - 0.812 - - large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]
6. TAF2 ENSGALG00000043193 6311 0.798 - - - - - - - 0.798 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
7. CCNDBP1 ENSGALG00000004837 11520 0.785 - - - - - - - 0.785 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
8. ORC3 ENSGALG00000015800 4316 0.785 - - - - - - - 0.785 - - origin recognition complex subunit 3 [Source:NCBI gene;Acc:421822]
9. PEX2 ENSGALG00000035752 4427 0.783 - - - - - - - 0.783 - - peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
10. PHGDH ENSGALG00000002988 6912 0.781 - - - - - - - 0.781 - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
11. CDK2AP1 ENSGALG00000034919 5469 0.779 - - - - - - - 0.779 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
12. SSR2 ENSGALG00000000764 32190 0.778 - - - - - - - 0.778 - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
13. EXOG ENSGALG00000006153 4551 0.775 - - - - - - - 0.775 - - exo/endonuclease G [Source:HGNC Symbol;Acc:HGNC:3347]
14. COMTD1 ENSGALG00000005000 1248 0.773 - - - - - - - 0.773 - - catechol-O-methyltransferase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26309]
15. MRPS30 ENSGALG00000014874 3416 0.773 - - - - - - - 0.773 - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
16. HERC3 ENSGALG00000010363 3229 0.769 - - - - - - - 0.769 - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:NCBI gene;Acc:422514]
17. SSR1 ENSGALG00000012798 62626 0.768 - - - - - - - 0.768 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
18. METTL6 ENSGALG00000040665 4467 0.767 - - - - - - 0.767 - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
19. SLMO2 SLMO2 9207 0.767 - - - - - - - 0.767 - -
20. GXYLT1 ENSGALG00000009532 5682 0.766 - - - - - - - 0.766 - - glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
21. METTL25 1538 0.764 - - - - - - - 0.764 - - methyltransferase like 25, transcript variant X1
22. ANLN 10479 0.761 - - - - - - - 0.761 - - anillin actin binding protein, transcript variant X2
23. MVP ENSGALG00000040471 1407 0.758 - - 0.758 - - - - - - - major vault protein [Source:NCBI gene;Acc:420049]
24. PRKACB ENSGALG00000028530 12506 0.758 - - - - - - - 0.758 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
25. EPB41L1 ENSGALG00000034171 3616 0.755 - - - - - - - 0.755 - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
26. ALKBH8 ENSGALG00000017170 699 0.754 - - - - - - 0.754 - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
27. DNMT3B ENSGALG00000041461 12959 0.753 - - - - - - - 0.753 - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
28. POP4 ENSGALG00000041972 3894 0.753 - - 0.753 - - - - - - - POP4 homolog, ribonuclease P/MRP subunit [Source:NCBI gene;Acc:768362]
29. HINT3 ENSGALG00000044342 5674 0.752 - - - - - - - 0.752 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
30. IARS ENSGALG00000004813 12936 0.749 - - - - - - - 0.749 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
31. DNAL4 ENSGALG00000043451 4469 0.746 - - - - - - - 0.746 - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
32. SDF2L1 ENSGALG00000031982 6084 0.745 - - - - - - - 0.745 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
33. ACTR1A ENSGALG00000008086 3145 0.745 - - - - - - - 0.745 - - ARP1 actin related protein 1 homolog A [Source:NCBI gene;Acc:423862]
34. KIAA1143 ENSGALG00000035952 6735 0.744 - - - - - - - 0.744 - - KIAA1143 [Source:NCBI gene;Acc:420709]
35. TANC1 ENSGALG00000012570 4196 0.744 - - - - - - - 0.744 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
36. EPT1 EPT1 2193 0.742 - - - - - - 0.742 - - -
37. CWC27 ENSGALG00000014747 8389 0.742 - - - - - - - 0.742 - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
38. FAF1 ENSGALG00000010536 1522 0.742 - - - - - - 0.742 - - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
39. TXLNA 6802 0.742 - - - - - - - 0.742 - - taxilin alpha, transcript variant X2
40. MRPL41 ENSGALG00000008746 3833 0.742 - - - - - - - 0.742 - - mitochondrial ribosomal protein L41 [Source:NCBI gene;Acc:417261]
41. AREL1 ENSGALG00000010270 2145 0.742 - - - - - - 0.742 - - - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20363]
42. SLC9A6 ENSGALG00000006180 1760 0.741 - - - - - - - 0.741 - - solute carrier family 9 member A6 [Source:HGNC Symbol;Acc:HGNC:11079]
43. TRAPPC6B ENSGALG00000010157 7567 0.74 - - - - - - - 0.740 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
44. SNX7 ENSGALG00000005478 4736 0.739 - - - - - - - 0.739 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
45. C20H20ORF111 C20H20ORF111 4029 0.739 - - - - - - - 0.739 - -
46. GPBP1L1 ENSGALG00000010276 10253 0.738 - - - - - - - 0.738 - - GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
47. ERLIN2 ENSGALG00000003092 18251 0.738 - - - - - - - 0.738 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
48. TRIM71 ENSGALG00000019622 1633 0.738 - - - - - - - - 0.738 - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
49. MRRF ENSGALG00000001333 2102 0.737 - - - - - - - 0.737 - - mitochondrial ribosome recycling factor [Source:NCBI gene;Acc:417110]
50. RASSF8 ENSGALG00000014041 850 0.735 - - - - - - - - 0.735 - Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
51. AXIN2 ENSGALG00000039200 2333 0.734 - - - - - - - 0.734 - - axin 2 [Source:NCBI gene;Acc:395152]
52. HCN2 ENSGALG00000001342 7506 0.733 - - - - - - - 0.733 - - hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]
53. PDIA5 ENSGALG00000011689 6913 0.733 - - - - - - 0.733 - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
54. HHIPL1 ENSGALG00000036286 528 0.733 - - 0.733 - - - - - - - HHIP like 1, transcript variant X2
55. UBE2K ENSGALG00000014290 2138 0.732 - - - - - - - 0.732 - - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
56. ENSGALG00000003048 ENSGALG00000003048 165 0.732 - - 0.732 - - - - - - -
57. ABCA3 ENSGALG00000037837 1606 0.731 - - 0.731 - - - - - - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
58. PIEZO1 ENSGALG00000043725 838 0.73 - - - - - - - 0.730 - - piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]
59. LIN9 ENSGALG00000009233 2968 0.73 - - - - - - - 0.730 - - lin-9 DREAM MuvB core complex component [Source:NCBI gene;Acc:421316]
60. IQCA1 ENSGALG00000003980 87 0.73 - - - - - - - - 0.730 - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
61. ORC4 ENSGALG00000012448 8405 0.729 - - - - - - - 0.729 - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
62. STRBP ENSGALG00000029927 3516 0.729 - - - - - - 0.729 - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
63. TRDMT1 ENSGALG00000008686 2663 0.728 - - - - - - - 0.728 - - tRNA aspartic acid methyltransferase 1 [Source:NCBI gene;Acc:420520]
64. SLU7 ENSGALG00000034414 5386 0.728 - - - - - - - 0.728 - - SLU7 homolog, splicing factor [Source:NCBI gene;Acc:416157]
65. MRPS22 ENSGALG00000005367 8307 0.727 - - - - - - - 0.727 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
66. PSMC3IP ENSGALG00000019741 5428 0.726 - - - - - - 0.726 - - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
67. SLC39A10 ENSGALG00000007777 272 0.726 - - - - - - - - 0.726 - solute carrier family 39 member 10 [Source:HGNC Symbol;Acc:HGNC:20861]
68. GALNS GALNS 2317 0.725 - - - - - - - 0.725 - -
69. ANAPC1 ENSGALG00000008254 2519 0.725 - - 0.725 - - - - - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
70. LYSMD2 ENSGALG00000018976 2420 0.724 - - - - - - - 0.724 - - LysM domain containing 2 [Source:NCBI gene;Acc:415423]
71. CNR1 ENSGALG00000037511 38 0.724 - - 0.724 - - - - - - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
72. ZFAND4 ENSGALG00000005893 1415 0.724 - - - - - - - 0.724 - - zinc finger AN1-type containing 4 [Source:HGNC Symbol;Acc:HGNC:23504]
73. WDR89 ENSGALG00000011827 1481 0.724 - - - - - - - 0.724 - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
74. ATG4A ENSGALG00000008282 849 0.724 - - - - - - - 0.724 - - autophagy related 4A cysteine peptidase [Source:NCBI gene;Acc:772074]
75. COMMD9 ENSGALG00000034859 5062 0.723 - - - - - - - 0.723 - - COMM domain containing 9 [Source:HGNC Symbol;Acc:HGNC:25014]
76. RTN4IP1 ENSGALG00000015343 4366 0.722 - - - - - - - 0.722 - - reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
77. ENSGALG00000008856 ENSGALG00000008856 1497 0.722 - - 0.722 - - - - - - -
78. CSRP2BP CSRP2BP 4679 0.722 - - - - - - - 0.722 - -
79. ZNF217 ZNF217 14511 0.722 - - - - - - - 0.722 - -
80. PHF14 ENSGALG00000038041 13687 0.722 - - - - - - - 0.722 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
81. C11ORF75 C11ORF75 2874 0.721 - - - - - - - 0.721 - -
82. SCFD1 ENSGALG00000009916 5756 0.721 - - - - - - - 0.721 - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
83. SERINC2 ENSGALG00000021685 1581 0.721 - - - - - - - - 0.721 - serine incorporator 2 [Source:NCBI gene;Acc:419558]
84. SPATA2 ENSGALG00000008026 2040 0.72 - - 0.720 - - - - - - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
85. MSMO1 ENSGALG00000009560 6928 0.72 - - - - - - - 0.720 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
86. ENSGALG00000027162 ENSGALG00000027162 8 0.72 - - 0.720 - - - - - - -
87. DLG5 ENSGALG00000043018 2357 0.719 - - - - - - - 0.719 - - discs large MAGUK scaffold protein 5 [Source:HGNC Symbol;Acc:HGNC:2904]
88. MSH6 ENSGALG00000008957 6396 0.719 - - - - - - - 0.719 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
89. UTP14A ENSGALG00000024039 8532 0.719 - - - - - - - 0.719 - - UTP14A small subunit processome component
90. STYXL1 ENSGALG00000001963 327 0.719 - - 0.719 - - - - - - - serine/threonine/tyrosine interacting like 1
91. NMT1 ENSGALG00000000857 5770 0.719 - - - - - - - 0.719 - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
92. LMBRD1 ENSGALG00000016174 3469 0.718 - - - - - - - 0.718 - - LMBR1 domain containing 1 [Source:NCBI gene;Acc:421874]
93. PRKRIP1 ENSGALG00000001833 5092 0.718 - - - - - - 0.718 - - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
94. ENSGALG00000028938 ENSGALG00000028938 18616 0.717 - - - - - - - 0.717 - -
95. UTP15 ENSGALG00000013510 13122 0.717 - - - - - - - 0.717 - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
96. TTC3 ENSGALG00000016050 4115 0.716 - - - - - - 0.716 - - - tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
97. EX-FABP EX-FABP 516 0.716 - - 0.716 - - - - - - -
98. NUP205 ENSGALG00000011662 4157 0.716 - - - - - - - 0.716 - - nucleoporin 205
99. WWC1 ENSGALG00000001826 4666 0.716 - - - - - - - 0.716 - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
100. CCNC ENSGALG00000015471 6497 0.716 - - - - - - - 0.716 - - cyclin C [Source:NCBI gene;Acc:421791]

There are 69 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA