Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ITGB3

Gene Name Gene ID Reads Annotation
ITGB3 ENSGALG00000000379 1969 integrin subunit beta 3 [Source:NCBI gene;Acc:374209]











Genes with expression patterns similar to ITGB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ITGB3 ENSGALG00000000379 1969 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 integrin subunit beta 3 [Source:NCBI gene;Acc:374209]
2. LGALS1_1 ENSGALG00000012420 1560 1.43 - 0.708 - 0.722 - - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
3. VPAC2 VPAC2 45 0.845 - - - - - - - 0.845 - -
4. PDGFB ENSGALG00000012178 509 0.819 - - - - - - - 0.819 - - platelet-derived growth factor beta polypeptide [Source:NCBI gene;Acc:374128]
5. LMO2 ENSGALG00000029892 4773 0.798 - - - - - - - 0.798 - - LIM domain only 2 [Source:NCBI gene;Acc:374129]
6. PTPRQ ENSGALG00000010935 626 0.796 - - - - - - - - 0.796 - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
7. MICU3 ENSGALG00000013661 1466 0.796 - - - - - - 0.796 - - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
8. SMYD1 ENSGALG00000015935 75 0.796 - - - - - - - 0.796 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
9. TAGLN ENSGALG00000011902 12030 0.792 - 0.792 - - - - - - - - transgelin [Source:NCBI gene;Acc:396490]
10. TSPO2 ENSGALG00000003212 5141 0.791 - - - - - - - - 0.791 - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
11. HBE 329974 0.789 - - - - - - - - 0.789 - hemoglobin subunit epsilon
12. KLHL4 ENSGALG00000006877 1121 0.787 - - - 0.787 - - - - - - kelch like family member 4 [Source:HGNC Symbol;Acc:HGNC:6355]
13. EGFL7 ENSGALG00000043499 6272 0.787 - - - - - - - - 0.787 - EGF like domain multiple 7 [Source:NCBI gene;Acc:417137]
14. PPM1F ENSGALG00000039121 26 0.786 - - - - - - - 0.786 - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
15. CNTN1 ENSGALG00000009523 158 0.785 - - - - - - - 0.785 - - contactin 1 [Source:NCBI gene;Acc:417786]
16. ELN 765 0.782 - - - - - - - 0.782 - - elastin, transcript variant X24
17. ALX1 ENSGALG00000027213 3141 0.779 - - - - 0.779 - - - - - ALX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1494]
18. ZFAND4 ENSGALG00000005893 1415 0.778 - - - - - - - 0.778 - - zinc finger AN1-type containing 4 [Source:HGNC Symbol;Acc:HGNC:23504]
19. HBZ ENSGALG00000023740 507289 0.776 - - - - - - - - 0.776 - hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
20. HBG1 HBG1 468163 0.773 - - - - - - - - 0.773 -
21. CA2 ENSGALG00000030781 1723 0.773 - - - 0.773 - - - - - - carbonic anhydrase 2 [Source:NCBI gene;Acc:396257]
22. OSBPL8 ENSGALG00000010246 4565 0.772 - - - - - - - 0.772 - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
23. LY86 ENSGALG00000012801 865 0.766 - - - 0.766 - - - - - - lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
24. PRNP ENSGALG00000000209 2159 0.766 - - - - - - - 0.766 - - prion protein [Source:NCBI gene;Acc:396452]
25. AMBRA1 ENSGALG00000008358 2865 0.763 - - - - - - 0.763 - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
26. FLAD1 ENSGALG00000027700 1606 0.759 - - - - - - 0.759 - - - flavin adenine dinucleotide synthetase 1 [Source:HGNC Symbol;Acc:HGNC:24671]
27. KDM5A ENSGALG00000012986 624 0.758 - - - - - - - 0.758 - - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
28. SMO ENSGALG00000036114 6559 0.757 - - - - - - - 0.757 - - smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
29. ARPC1B ENSGALG00000032588 2407 0.757 - - - - - - - 0.757 - - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
30. DSC1 ENSGALG00000015140 16 0.757 - - - - - - - 0.757 - - desmocollin 1, transcript variant X1
31. KLHL6 ENSGALG00000002263 308 0.756 - - - - - - - - 0.756 - kelch like family member 6 [Source:NCBI gene;Acc:424762]
32. COL12A1 ENSGALG00000015908 1300 0.755 - - - 0.755 - - - - - - collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
33. CCDC86 ENSGALG00000036935 5280 0.755 - - - - - - - 0.755 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
34. CLPX ENSGALG00000007289 6348 0.755 - - - - - - 0.755 - - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
35. FXYD6 ENSGALG00000025937 4073 0.754 - 0.754 - - - - - - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
36. ENSGALG00000019522 ENSGALG00000019522 122 0.753 - - - - - - - 0.753 - -
37. gga-mir-6599 ENSGALG00000028121 4746 0.752 - - - - - - - 0.752 - - gga-mir-6599 [Source:miRBase;Acc:MI0022544]
38. PACS2 1614 0.751 - - - - - - - 0.751 - - phosphofurin acidic cluster sorting protein 2, transcript variant X13
39. TP53I3 ENSGALG00000016502 178 0.75 - - - - - - - 0.750 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
40. SNX2 ENSGALG00000005337 590 0.75 - - - - - - - 0.750 - - sorting nexin 2 [Source:NCBI gene;Acc:426797]
41. HOOK3 ENSGALG00000015390 992 0.746 - - - - - - - 0.746 - - hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
42. ANKRD13C ENSGALG00000031210 2152 0.745 - - - - - 0.745 - - - - ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:HGNC:25374]
43. NXPH2 ENSGALG00000029083 353 0.743 - - - - - - - 0.743 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
44. RPAP3 ENSGALG00000009743 3380 0.742 - - - - - - 0.742 - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
45. ALDH6 ALDH6 771 0.742 - - - - - - - - - 0.742
46. EFHD1 ENSGALG00000001428 2831 0.74 - - - - - - 0.740 - - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
47. RIPPLY3 1380 0.74 - - - 0.740 - - - - - - ripply transcriptional repressor 3
48. SEC63 ENSGALG00000015308 11596 0.739 - - - - - - 0.739 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
49. CSRP2 ENSGALG00000029921 6629 0.737 - 0.737 - - - - - - - - cysteine and glycine rich protein 2 [Source:NCBI gene;Acc:396128]
50. ATP6V0A2 ENSGALG00000003194 4824 0.737 - - - - - - 0.737 - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
51. BMPER ENSGALG00000029811 636 0.736 - - - 0.736 - - - - - - BMP binding endothelial regulator [Source:NCBI gene;Acc:420744]
52. DUSP21 ENSGALG00000007765 171 0.736 - - - - - - - 0.736 - - dual specificity phosphatase 21 [Source:HGNC Symbol;Acc:HGNC:20476]
53. MCAT ENSGALG00000034275 4598 0.735 - - - - - - 0.735 - - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
54. TST ENSGALG00000012488 5314 0.734 - - - - - - 0.734 - - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
55. ST6GALNAC1 ENSGALG00000001862 133 0.731 - - - - - - - 0.731 - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396168]
56. DZANK1 ENSGALG00000008731 120 0.73 - - - - - - - 0.730 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
57. PDPN ENSGALG00000030096 647 0.73 - - - - - - - - 0.730 - podoplanin, transcript variant X4
58. LIX1 ENSGALG00000015290 7589 0.729 - - - - - - - - 0.729 - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
59. IRK1 IRK1 563 0.729 - - - - - - - 0.729 - -
60. NPHS2 ENSGALG00000004163 850 0.729 - - - - - - - - 0.729 - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
61. MPL ENSGALG00000009965 334 0.728 - - - 0.728 - - - - - - MPL proto-oncogene, thrombopoietin receptor [Source:NCBI gene;Acc:414804]
62. PCDH10 ENSGALG00000009719 483 0.728 - - - - - - - 0.728 - - protocadherin 10 [Source:NCBI gene;Acc:408048]
63. HAPLN1 ENSGALG00000015627 14942 0.728 - - - - 0.728 - - - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
64. LCLAT1 ENSGALG00000009056 5207 0.728 - - - - - - 0.728 - - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
65. B3GAT2 ENSGALG00000031590 615 0.727 - - - - - - - 0.727 - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
66. CZH5ORF44 CZH5ORF44 2382 0.727 - - - - - - 0.727 - - -
67. LASP-2 LASP-2 4415 0.727 - - - - - - - 0.727 - -
68. CSTA ENSGALG00000014412 422 0.727 - - - 0.727 - - - - - - cystatin A [Source:HGNC Symbol;Acc:HGNC:2481]
69. ARHGAP25 ENSGALG00000035194 74 0.726 - - - - - - - 0.726 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
70. EMILIN2 ENSGALG00000032997 2460 0.726 - - - - - - 0.726 - - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
71. LPXN 133 0.725 - - - - - - - 0.725 - - leupaxin, transcript variant X4
72. ENSGALG00000024035 ENSGALG00000024035 544 0.721 - - - - - - - - 0.721 -
73. COL18A1 ENSGALG00000038311 11934 0.72 - - - - - - 0.720 - - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
74. TRAF-5 TRAF-5 102 0.719 - - - - - - - 0.719 - -
75. F2RL2 ENSGALG00000023379 1049 0.719 - - - 0.719 - - - - - - coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
76. LAMC3 517 0.718 - - - 0.718 - - - - - - laminin subunit gamma 3
77. ITGB1 ENSGALG00000007145 19551 0.718 - - - - - - 0.718 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
78. IGFBP7 ENSGALG00000037332 2993 0.718 - - - - - - 0.718 - - - insulin like growth factor binding protein 7, transcript variant X1
79. FAM219A ENSGALG00000005821 52 0.716 - - - - - - - 0.716 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
80. ITPKB ENSGALG00000009068 324 0.715 - - - - - - - 0.715 - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
81. ZNF609 ENSGALG00000040087 2299 0.713 - - - - - - 0.713 - - - zinc finger protein 609 [Source:NCBI gene;Acc:415331]
82. ANXA11 ENSGALG00000043826 5189 0.713 - - - 0.713 - - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
83. LMOD1 ENSGALG00000028721 81 0.712 - - - - - - - 0.712 - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
84. CO6 CO6 1623 0.712 - - - - - - - - 0.712 -
85. WNT5A ENSGALG00000034168 10160 0.712 - - - 0.712 - - - - - - Wnt family member 5A [Source:NCBI gene;Acc:395703]
86. INA ENSGALG00000028238 208 0.711 - - - - - - - 0.711 - - internexin neuronal intermediate filament protein alpha
87. HS3ST1 ENSGALG00000014934 182 0.71 - - - - - - - 0.710 - - heparan sulfate-glucosamine 3-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5194]
88. LRSAM1 ENSGALG00000008819 2068 0.709 - - - - - - - 0.709 - - leucine rich repeat and sterile alpha motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25135]
89. NCOA2 ENSGALG00000036017 256 0.708 - - - - - - - 0.708 - - nuclear receptor coactivator 2, transcript variant X9
90. HBB HBB 7552 0.708 - - - - - - - - 0.708 -
91. PAK2 ENSGALG00000006426 283 0.708 - - - - - - - 0.708 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
92. C14H16ORF42 C14H16ORF42 263 0.708 - - - - - - - 0.708 - -
93. KRT20 ENSGALG00000019716 11 0.707 - - - - - - - 0.707 - - keratin 20 [Source:NCBI gene;Acc:420045]
94. LRRC40 ENSGALG00000011301 3409 0.707 - - - - - - - 0.707 - - leucine rich repeat containing 40 [Source:NCBI gene;Acc:424713]
95. S100A11 ENSGALG00000036711 23454 0.706 - - - - 0.706 - - - - - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
96. ENSGALG00000008755 ENSGALG00000008755 3523 0.706 - - - - - - - 0.706 - -
97. RARRES1 ENSGALG00000009594 3573 0.705 - - - - - - - - 0.705 - retinoic acid receptor responder 1 [Source:NCBI gene;Acc:395209]
98. MYOF ENSGALG00000006705 793 0.705 - - - - - - - 0.705 - - myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
99. ARHGAP21 ENSGALG00000007721 3961 0.704 - - - - - - 0.704 - - - Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
100. C1QTNF6 ENSGALG00000027067 493 0.704 - - - - - - - 0.704 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]

There are 4 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA