Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXB1

Gene Name Gene ID Reads Annotation
HOXB1 ENSGALG00000013454 9 homeobox B1 [Source:NCBI gene;Acc:395900]











Genes with expression patterns similar to HOXB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXB1 ENSGALG00000013454 9 2 - - 1.000 - 1.000 - - - - - homeobox B1 [Source:NCBI gene;Acc:395900]
2. EMID1 4 1 - - - - 1.000 - - - - - EMI domain containing 1, transcript variant X5
3. TRHDE ENSGALG00000010200 4 1 - - - - 1.000 - - - - - thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
4. TSNAXIP1 ENSGALG00000001533 9 1 - - - - 1.000 - - - - - translin associated factor X interacting protein 1, transcript variant X2
5. HDC ENSGALG00000023436 3 1 - - - - 1.000 - - - - - histidine decarboxylase [Source:NCBI gene;Acc:415454]
6. HEPACAM2 ENSGALG00000009482 3 1 - - - - 1.000 - - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
7. ARL15 ENSGALG00000014911 13 1 - - - - 1.000 - - - - - ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
8. TRAF2 ENSGALG00000042838 24 1 - - - - 1.000 - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
9. TESK2 ENSGALG00000010230 9 1 - - - - 1.000 - - - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
10. C2CD3 ENSGALG00000017314 13 1 - - - - 1.000 - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
11. GRHL2 ENSGALG00000037687 3 1 - - - - 1.000 - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
12. EPHB6 ENSGALG00000014749 30 1 - - - - 1.000 - - - - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
13. SYTL2L ENSGALG00000008326 5 1 - - - - 1.000 - - - - - synaptotagmin-like protein 2-like, transcript variant X4
14. CHAT ENSGALG00000002289 26 1 - - - - 1.000 - - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
15. POMT2 ENSGALG00000041962 1 1 - - - - 1.000 - - - - - protein O-mannosyltransferase 2, transcript variant X7
16. AKAP14 26 1 - - - - 1.000 - - - - - A-kinase anchoring protein 14, transcript variant X1
17. ACSL6 ENSGALG00000006644 5 1 - - - - 1.000 - - - - - acyl-CoA synthetase long-chain family member 6, transcript variant X3
18. RXFP1 ENSGALG00000009429 10 1 - - - - 1.000 - - - - - relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
19. CDHR4 2 1 - - - - 1.000 - - - - - cadherin related family member 4
20. PCDH19 ENSGALG00000006822 13 1 - - - - 1.000 - - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
21. SNORD100 SNORD100 270 1 - - - - 1.000 - - - - -
22. SLC25A43 ENSGALG00000008682 1 1 - - - - 1.000 - - - - - solute carrier family 25 member 43 [Source:HGNC Symbol;Acc:HGNC:30557]
23. SLC25A25 ENSGALG00000005095 4 1 - - - - 1.000 - - - - - solute carrier family 25 member 25 [Source:HGNC Symbol;Acc:HGNC:20663]
24. FBXL4 ENSGALG00000015490 12 1 - - - - 1.000 - - - - - F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
25. HFM1 ENSGALG00000006091 5 1 - - - - 1.000 - - - - - HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
26. ADAP1 ENSGALG00000003819 13 1 - - - - 1.000 - - - - - ArfGAP with dual PH domains 1 [Source:HGNC Symbol;Acc:HGNC:16486]
27. ADCY1 ENSGALG00000031170 4 1 - - - - 1.000 - - - - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
28. ANO3 ENSGALG00000013311 16 1 - - - - 1.000 - - - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
29. ENSGALG00000003051 ENSGALG00000003051 1 1 - - - - 1.000 - - - - -
30. DAGLA ENSGALG00000036492 3 1 - - - - 1.000 - - - - - diacylglycerol lipase alpha [Source:HGNC Symbol;Acc:HGNC:1165]
31. BTBD10 ENSGALG00000005369 56 1 - - - - 1.000 - - - - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
32. XDH ENSGALG00000008701 10 1 - - - - 1.000 - - - - - xanthine dehydrogenase [Source:NCBI gene;Acc:396025]
33. CAPN13 ENSGALG00000020084 6 1 - - - - 1.000 - - - - - calpain 13 [Source:HGNC Symbol;Acc:HGNC:16663]
34. PLD5 ENSGALG00000010737 5 1 - - - - 1.000 - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
35. GPR22 ENSGALG00000008032 5 1 - - - - 1.000 - - - - - G protein-coupled receptor 22, transcript variant X1
36. CDCA4L ENSGALG00000023023 1 1 - - - - 1.000 - - - - - cell division cycle associated 4-like, transcript variant X1
37. CRK ENSGALG00000002656 15 1 - - - - 1.000 - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
38. AKAP11 ENSGALG00000022739 82 1 - - - - 1.000 - - - - - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
39. SCN1A ENSGALG00000010943 6 1 - - - - 1.000 - - - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
40. FSTL1 ENSGALG00000014970 25 1 - - - - 1.000 - - - - - follistatin like 1 [Source:NCBI gene;Acc:395349]
41. BRINP2 ENSGALG00000004448 26 1 - - - - 1.000 - - - - - BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
42. SERPINF2 ENSGALG00000002987 236 0.952 - - - - 0.952 - - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
43. PLXNB1 23 0.943 - - 0.943 - - - - - - - plexin B1, transcript variant X2
44. FHL2 ENSGALG00000016797 11 0.91 - - 0.910 - - - - - - - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
45. TLL2 ENSGALG00000005519 10 0.91 - - 0.910 - - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
46. LRP3 ENSGALG00000004853 13 0.91 - - 0.910 - - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
47. CNGA2 ENSGALG00000007282 2 0.91 - - 0.910 - - - - - - - cyclic nucleotide gated channel alpha 2 [Source:HGNC Symbol;Acc:HGNC:2149]
48. ENSGALG00000026347 ENSGALG00000026347 2 0.91 - - 0.910 - - - - - - -
49. GPD1L2 ENSGALG00000012061 31 0.91 - - 0.910 - - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
50. GAN ENSGALG00000013437 11 0.91 - - 0.910 - - - - - - - gigaxonin [Source:HGNC Symbol;Acc:HGNC:4137]
51. LOXHD1 ENSGALG00000037829 3 0.91 - - 0.910 - - - - - - - lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:HGNC:26521]
52. TNFAIP3 ENSGALG00000013861 11 0.91 - - 0.910 - - - - - - - TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
53. ENSGALG00000009041 ENSGALG00000009041 27 0.91 - - 0.910 - - - - - - -
54. CLRN2 ENSGALG00000027453 3 0.91 - - 0.910 - - - - - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
55. SNX8 ENSGALG00000004255 4 0.91 - - 0.910 - - - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
56. ZMAT4 ENSGALG00000003470 2 0.91 - - 0.910 - - - - - - - zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]
57. POMGNT2 ENSGALG00000011518 36 0.91 - - 0.910 - - - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
58. SERAC1 ENSGALG00000013732 24 0.906 - - 0.906 - - - - - - - serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
59. LRRC49 ENSGALG00000004059 29 0.904 - - 0.904 - - - - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
60. MMP23B ENSGALG00000001392 53 0.893 - - 0.893 - - - - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
61. SYCP1 ENSGALG00000002511 13 0.892 - - 0.892 - - - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
62. SLC17A6 ENSGALG00000039254 16 0.892 - - 0.892 - - - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
63. U4atac U4atac 23 0.891 - - 0.891 - - - - - - -
64. HOXB13 ENSGALG00000033154 71 0.89 - - 0.890 - - - - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
65. TGM4 ENSGALG00000033171 19 0.882 - - 0.882 - - - - - - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
66. DCUN1D3 ENSGALG00000002267 6 0.88 - - 0.880 - - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
67. SNX18 ENSGALG00000014914 7 0.88 - - 0.880 - - - - - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
68. RAB43 ENSGALG00000005021 5 0.877 - - - - 0.877 - - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
69. CALR3 ENSGALG00000003914 8 0.875 - - 0.875 - - - - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
70. ENSGALG00000001323 ENSGALG00000001323 3 0.869 - - 0.869 - - - - - - -
71. SLC35A3 12 0.869 - - 0.869 - - - - - - - solute carrier family 35 member A3, transcript variant X7
72. TRPM1 ENSGALG00000003849 5 0.869 - - 0.869 - - - - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
73. B4GALNT3 ENSGALG00000012988 12 0.869 - - 0.869 - - - - - - - beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]
74. TNPO1 ENSGALG00000015014 57 0.868 - - 0.868 - - - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
75. ADAM17 ENSGALG00000016427 49 0.863 - - 0.863 - - - - - - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
76. GCM2 ENSGALG00000012768 6 0.858 - - 0.858 - - - - - - - glial cells missing homolog 2 [Source:NCBI gene;Acc:428478]
77. OBSL1 ENSGALG00000011242 22 0.856 - - - - 0.856 - - - - - obscurin like 1 [Source:HGNC Symbol;Acc:HGNC:29092]
78. PPHLN1 ENSGALG00000009547 30 0.851 - - 0.851 - - - - - - - periphilin 1 [Source:NCBI gene;Acc:417792]
79. DOCK5 ENSGALG00000000311 51 0.845 - - 0.845 - - - - - - - dedicator of cytokinesis 5, transcript variant X2
80. ARHGEF18 ENSGALG00000003572 224 0.839 - - - - 0.839 - - - - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
81. CXADR ENSGALG00000015701 96 0.836 - - 0.836 - - - - - - - coxsackie virus and adenovirus receptor, transcript variant X2
82. SLC5A11 ENSGALG00000005933 28 0.835 - - 0.835 - - - - - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
83. ENC1 ENSGALG00000014930 10 0.833 - - 0.833 - - - - - - - ectodermal-neural cortex 1 [Source:HGNC Symbol;Acc:HGNC:3345]
84. UPF3A ENSGALG00000016815 48 0.833 - - 0.833 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
85. SULT6B1 ENSGALG00000046375 23 0.83 - - 0.830 - - - - - - - sulfotransferase family 6B member 1 [Source:HGNC Symbol;Acc:HGNC:33433]
86. GAK ENSGALG00000015352 99 0.827 - - 0.827 - - - - - - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
87. DLST ENSGALG00000010286 19 0.826 - - 0.826 - - - - - - - dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
88. MCT2L ENSGALG00000007596 127 0.826 - - 0.826 - - - - - - - monocarboxylate transporter 2-like, transcript variant X5
89. TMEM63B ENSGALG00000010282 7 0.824 - - 0.824 - - - - - - - transmembrane protein 63B [Source:HGNC Symbol;Acc:HGNC:17735]
90. FEM1B ENSGALG00000028906 4 0.822 - - 0.822 - - - - - - - fem-1 homolog B [Source:NCBI gene;Acc:415559]
91. LRRC47 7 0.817 - - 0.817 - - - - - - - leucine rich repeat containing 47
92. ENSGALG00000026654 ENSGALG00000026654 10 0.812 - - 0.812 - - - - - - -
93. ENSGALG00000026592 ENSGALG00000026592 4331 0.812 - - - - 0.812 - - - - -
94. EXOC6 ENSGALG00000006763 119 0.811 - - 0.811 - - - - - - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
95. gga-mir-20b gga-mir-20b 7 0.81 - - 0.810 - - - - - - -
96. BAP1 ENSGALG00000004366 12 0.804 - - 0.804 - - - - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
97. FAM26F 74 0.802 - - 0.802 - - - - - - - family with sequence similarity 26 member F
98. SLC13A5 ENSGALG00000005995 23 0.793 - - 0.793 - - - - - - - solute carrier family 13 member 5 [Source:HGNC Symbol;Acc:HGNC:23089]
99. IL22RA1 ENSGALG00000004221 71 0.793 - - 0.793 - - - - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
100. NEK9 ENSGALG00000010314 6 0.79 - - 0.790 - - - - - - - NIMA related kinase 9 [Source:HGNC Symbol;Acc:HGNC:18591]

There are 37 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA