Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ERCC3

Gene Name Gene ID Reads Annotation
ERCC3 ENSGALG00000011515 3133 ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]











Genes with expression patterns similar to ERCC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ERCC3 ENSGALG00000011515 3133 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
2. BORA ENSGALG00000016931 3660 2.287 - - 0.803 - - - 0.720 0.764 - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
3. HINT3 ENSGALG00000044342 5674 1.693 - - 0.884 - - - - 0.809 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
4. MAEA ENSGALG00000013310 13230 1.644 - - 0.825 - - - - 0.819 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
5. SHMT1 ENSGALG00000005046 1430 1.615 - - 0.888 - - - - 0.727 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
6. BTBD9 ENSGALG00000010131 1870 1.613 - - 0.904 - - - - 0.709 - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
7. SLC12A4 ENSGALG00000034179 5674 1.583 - - 0.859 - - - - 0.724 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
8. PSMD13 ENSGALG00000043684 14720 1.581 - - 0.791 - - - - 0.790 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
9. ORC3 ENSGALG00000015800 4316 1.557 - - 0.846 - - - - 0.711 - - origin recognition complex subunit 3 [Source:NCBI gene;Acc:421822]
10. PRKACB ENSGALG00000028530 12506 1.554 - - 0.800 - - - - 0.754 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
11. SPDL1 ENSGALG00000001942 4403 1.551 - - 0.831 - - - - 0.720 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
12. ACTR8 ENSGALG00000005385 3647 1.535 - - 0.822 - - - - 0.713 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
13. SPCS1 ENSGALG00000001655 7718 1.53 - - 0.787 - - - 0.743 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
14. VTA1 ENSGALG00000013810 4998 1.52 - - 0.736 - - - - 0.784 - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
15. GPC1 ENSGALG00000040316 13364 1.519 - - 0.797 - - - - 0.722 - - glypican 1 [Source:NCBI gene;Acc:424770]
16. STX16 ENSGALG00000007541 6458 1.514 - - 0.806 - - - 0.708 - - - syntaxin 16 [Source:NCBI gene;Acc:419315]
17. C6ORF162 C6ORF162 4217 1.511 - - 0.802 - - - 0.709 - - -
18. ENSGALG00000004711 ENSGALG00000004711 7347 1.51 - - 0.787 - - - - 0.723 - -
19. SYNE1 ENSGALG00000013505 2324 1.509 - - 0.795 - - - 0.714 - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
20. GEMIN6 ENSGALG00000013821 5589 1.48 - - 0.763 - - - - 0.717 - - gem nuclear organelle associated protein 6 [Source:NCBI gene;Acc:426266]
21. STRN3 ENSGALG00000040464 9045 1.472 - - - - - - 0.706 0.766 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
22. RAB18 ENSGALG00000007435 3589 1.47 - - - - - - 0.739 0.731 - - RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]
23. NDUFA12 ENSGALG00000011325 19807 1.468 - - - - - - 0.706 0.762 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
24. CHRAC1 ENSGALG00000040823 5695 1.467 - - 0.734 - - - - 0.733 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
25. DCTD ENSGALG00000010674 8396 1.461 - - 0.743 - - - - 0.718 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
26. WDR3 ENSGALG00000014791 5856 1.429 - - 0.718 - - - - 0.711 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
27. PCM1 ENSGALG00000013602 6347 1.419 - - - - - - 0.719 0.700 - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
28. MANF ENSGALG00000002362 7518 1.408 - - 0.707 - - - - 0.701 - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
29. SZT2 ENSGALG00000028561 255 0.949 - - 0.949 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
30. UEVLD ENSGALG00000006342 164 0.949 - - 0.949 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
31. TDRD6 48 0.948 - - 0.948 - - - - - - - tudor domain containing 6
32. ITGB4 ENSGALG00000002389 44 0.948 - - 0.948 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
33. MRC2 ENSGALG00000000461 48 0.948 - - 0.948 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
34. ENSGALG00000028964 ENSGALG00000028964 46 0.948 - - 0.948 - - - - - - -
35. FBXL5 ENSGALG00000014510 245 0.948 - - 0.948 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
36. SLC3A1 ENSGALG00000009973 608 0.947 - - 0.947 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
37. ENSGALG00000020103 ENSGALG00000020103 64 0.947 - - 0.947 - - - - - - -
38. OSGIN2 ENSGALG00000042840 83 0.947 - - 0.947 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
39. ITM2B ENSGALG00000016996 1112 0.946 - - 0.946 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
40. MED12 ENSGALG00000036322 814 0.946 - - 0.946 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
41. ARRDC4 ENSGALG00000007012 1039 0.946 - - 0.946 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
42. L3MBTL3 ENSGALG00000034030 113 0.946 - - 0.946 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
43. U4 U4 69 0.946 - - 0.946 - - - - - - -
44. CDC14B ENSGALG00000012627 110 0.946 - - 0.946 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
45. NXPE3 ENSGALG00000015344 111 0.946 - - 0.946 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
46. RQCD1 RQCD1 110 0.945 - - 0.945 - - - - - - -
47. SMARCAD1 ENSGALG00000037339 149 0.945 - - 0.945 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
48. ENSGALG00000004703 ENSGALG00000004703 112 0.945 - - 0.945 - - - - - - -
49. AKAP10 ENSGALG00000004679 103 0.945 - - 0.945 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
50. TUBGCP3 ENSGALG00000016836 332 0.945 - - 0.945 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
51. ENSGALG00000002020 ENSGALG00000002020 183 0.944 - - 0.944 - - - - - - -
52. WHSC1 1712 0.944 - - 0.944 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
53. DBN1 ENSGALG00000033405 216 0.944 - - 0.944 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
54. GDPD4 ENSGALG00000000690 824 0.944 - - 0.944 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
55. BBX ENSGALG00000015353 1281 0.943 - - 0.943 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
56. TRIM13 ENSGALG00000017011 92 0.943 - - 0.943 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
57. CLEC16A ENSGALG00000007167 66 0.943 - - 0.943 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
58. PTDSS2 ENSGALG00000004300 682 0.943 - - 0.943 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
59. NGF ENSGALG00000002556 122 0.943 - - 0.943 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
60. F2R ENSGALG00000014983 106 0.942 - - 0.942 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
61. ABCC3 ENSGALG00000007522 340 0.941 - - 0.941 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
62. GTF2H2 ENSGALG00000002399 2361 0.941 - - 0.941 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
63. RFK ENSGALG00000033558 1364 0.941 - - 0.941 - - - - - - - riboflavin kinase, transcript variant X3
64. PSMD14 ENSGALG00000011128 13335 0.94 - - 0.940 - - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
65. CHAMP1 ENSGALG00000016813 508 0.94 - - 0.940 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
66. LRRC42 ENSGALG00000010743 384 0.94 - - 0.940 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
67. CA9 ENSGALG00000021340 1431 0.94 - - 0.940 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
68. REXO2 ENSGALG00000035980 16319 0.94 - - 0.940 - - - - - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
69. DDX6 ENSGALG00000033064 2193 0.939 - - 0.939 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
70. PRUNE PRUNE 452 0.939 - - 0.939 - - - - - - -
71. FAM134C 860 0.939 - - 0.939 - - - - - - - family with sequence similarity 134 member C
72. TCTN2 ENSGALG00000023683 3596 0.939 - - 0.939 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
73. IFT81 ENSGALG00000003854 2534 0.939 - - 0.939 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
74. LRRC71 ENSGALG00000027351 695 0.939 - - 0.939 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
75. DUSP19 ENSGALG00000043268 5543 0.939 - - 0.939 - - - - - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
76. RAD54L2 ENSGALG00000003243 187 0.939 - - 0.939 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
77. IQCD ENSGALG00000037307 642 0.939 - - 0.939 - - - - - - - IQ motif containing D, transcript variant X2
78. BBS5 ENSGALG00000009846 344 0.939 - - 0.939 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
79. GON4L ENSGALG00000014643 1737 0.938 - - 0.938 - - - - - - - gon-4 like, transcript variant X2
80. RRN3 ENSGALG00000041989 3934 0.937 - - 0.937 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
81. MTHFSD ENSGALG00000033322 824 0.937 - - 0.937 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
82. RECQL ENSGALG00000013174 1323 0.937 - - 0.937 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
83. RPS6KB1 ENSGALG00000005198 169 0.936 - - 0.936 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
84. PRMT7 ENSGALG00000038865 2666 0.936 - - 0.936 - - - - - - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
85. TMEM242 ENSGALG00000013689 377 0.935 - - 0.935 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
86. CUL5 ENSGALG00000017165 2480 0.934 - - 0.934 - - - - - - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
87. ATP8B4 ENSGALG00000002326 456 0.934 - - 0.934 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
88. N4BP2L2 857 0.934 - - 0.934 - - - - - - - NEDD4 binding protein 2 like 2, transcript variant X7
89. ATP6V0A2 ENSGALG00000003194 4824 0.933 - - 0.933 - - - - - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
90. ATP10D ENSGALG00000014192 94 0.933 - - 0.933 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
91. HOXA7 ENSGALG00000026989 6746 0.933 - - 0.933 - - - - - - - homeobox A7 [Source:NCBI gene;Acc:395290]
92. WAPAL WAPAL 625 0.933 - - 0.933 - - - - - - -
93. KCTD3 ENSGALG00000009678 335 0.932 - - 0.932 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
94. ABCE1 ENSGALG00000009961 958 0.932 - - 0.932 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
95. NCAPD2 ENSGALG00000039448 8658 0.932 - - 0.932 - - - - - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
96. ADK ENSGALG00000005057 199 0.932 - - 0.932 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
97. CHGA ENSGALG00000010820 1028 0.931 - - 0.931 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
98. C6orf211 C6orf211 2644 0.931 - - 0.931 - - - - - - -
99. C18orf8 C18orf8 1512 0.931 - - 0.931 - - - - - - -
100. SOBP ENSGALG00000043047 147 0.931 - - 0.931 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]

There are 658 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA