Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EDEM3

Gene Name Gene ID Reads Annotation
EDEM3 ENSGALG00000004806 205 ER degradation enhancing alpha-mannosidase like protein 3 [Source:HGNC Symbol;Acc:HGNC:16787]











Genes with expression patterns similar to EDEM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EDEM3 ENSGALG00000004806 205 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ER degradation enhancing alpha-mannosidase like protein 3 [Source:HGNC Symbol;Acc:HGNC:16787]
2. ARL16 49 0.895 - - - - - 0.895 - - - - ADP ribosylation factor like GTPase 16, transcript variant X1
3. PCDH7 ENSGALG00000033883 6 0.886 - - - - - 0.886 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
4. CD200R1A CD200R1A 105 0.872 - - - - - 0.872 - - - -
5. FIBCD1 ENSGALG00000003866 2 0.855 - - - - - 0.855 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
6. ENSGALG00000027143 ENSGALG00000027143 23 0.845 - - - - - 0.845 - - - -
7. SCARB1 ENSGALG00000046226 428 0.842 - - - - - 0.842 - - - - scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
8. TMCC1 ENSGALG00000008487 65 0.839 - - - - 0.839 - - - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
9. CASP7 ENSGALG00000008933 506 0.839 - - - - - 0.839 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
10. SUFU ENSGALG00000008096 307 0.837 - - - - - 0.837 - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
11. MCAM ENSGALG00000030027 26 0.834 - - - - 0.834 - - - - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
12. IRG1 IRG1 21 0.832 - - - - 0.832 - - - - -
13. CYR61 ENSGALG00000008661 43 0.827 - - - - 0.827 - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
14. ENSGALG00000025953 ENSGALG00000025953 65 0.825 - - - - 0.825 - - - - -
15. SGK196 SGK196 83 0.825 - - - - - 0.825 - - - -
16. TDRD12 ENSGALG00000004704 19 0.824 - - - - 0.824 - - - - - tudor domain containing 12, transcript variant X3
17. ACVR2A ENSGALG00000012444 324 0.823 - - - - 0.823 - - - - - activin A receptor type 2A [Source:NCBI gene;Acc:396324]
18. GRIN1 ENSGALG00000008898 18 0.821 - - - - 0.821 - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
19. C10orf67 15 0.82 - - - - 0.820 - - - - - chromosome 10 open reading frame 67, transcript variant X2
20. DEAF1 ENSGALG00000034225 439 0.819 - - - - 0.819 - - - - - DEAF1, transcription factor [Source:NCBI gene;Acc:423017]
21. TJP3 ENSGALG00000000748 45 0.819 - - - - 0.819 - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
22. ENSGALG00000028221 ENSGALG00000028221 1663 0.819 - - - - 0.819 - - - - -
23. ENSGALG00000024018 ENSGALG00000024018 37 0.819 - - - - 0.819 - - - - -
24. TGIF2 ENSGALG00000024081 21 0.817 - - - - - 0.817 - - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
25. TRPV6 ENSGALG00000014746 3 0.817 - - - - - 0.817 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
26. C15orf60 C15orf60 16 0.817 - - - - - 0.817 - - - -
27. ASB15 ENSGALG00000008814 7 0.817 - - - - - 0.817 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
28. REM1 ENSGALG00000045602 4 0.817 - - - - - 0.817 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
29. LCT ENSGALG00000012260 21 0.817 - - - - - 0.817 - - - - lactase [Source:NCBI gene;Acc:424294]
30. ENSGALG00000008309 ENSGALG00000008309 7 0.817 - - - - - 0.817 - - - -
31. MRAP2 ENSGALG00000015838 7 0.817 - - - - - 0.817 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
32. CHRNB3 ENSGALG00000015384 9 0.817 - - - - - 0.817 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
33. TMEM56 ENSGALG00000005580 10 0.817 - - - - - 0.817 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
34. ENSGALG00000016499 ENSGALG00000016499 4 0.817 - - - - - 0.817 - - - -
35. C1QTNF4 ENSGALG00000008080 3 0.817 - - - - - 0.817 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
36. HSD11B1b ENSGALG00000001369 1 0.817 - - - - - 0.817 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
37. LOC396365 ENSGALG00000027219 7 0.817 - - - - - 0.817 - - - - preprogastrin
38. CPSF4L ENSGALG00000004441 4 0.817 - - - - - 0.817 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
39. SLC51A ENSGALG00000007478 6 0.817 - - - - - 0.817 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
40. MAPK1 ENSGALG00000001501 34 0.816 - - - - - 0.816 - - - - mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
41. ARF1 ENSGALG00000005393 364 0.815 - - - - - 0.815 - - - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
42. PSMD4 ENSGALG00000028505 16 0.814 - - - - - 0.814 - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
43. LUZP2 ENSGALG00000030151 585 0.814 - - - - - 0.814 - - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
44. FBXO42 ENSGALG00000003731 741 0.813 - - - - 0.813 - - - - - F-box protein 42 [Source:HGNC Symbol;Acc:HGNC:29249]
45. RFX3 ENSGALG00000010179 305 0.813 - - - - - 0.813 - - - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
46. IKBIP ENSGALG00000026284 31 0.812 - - - - - 0.812 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
47. CNP ENSGALG00000003457 191 0.807 - - - - 0.807 - - - - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:NCBI gene;Acc:395921]
48. ENSGALG00000023084 ENSGALG00000023084 10 0.807 - - - - - 0.807 - - - -
49. PHC2 62 0.806 - - - - 0.806 - - - - - polyhomeotic homolog 2
50. ENSGALG00000010218 ENSGALG00000010218 12 0.805 - - - - - 0.805 - - - -
51. IL1RAP ENSGALG00000007253 6 0.805 - - - - - 0.805 - - - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
52. LMTK2 ENSGALG00000003479 46 0.804 - - - - 0.804 - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
53. MAP3K21 ENSGALG00000011008 54 0.8 - - - - 0.800 - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
54. C14orf159 C14orf159 7 0.798 - - - - - 0.798 - - - -
55. C3H20ORF94 C3H20ORF94 414 0.798 - - - - - 0.798 - - - -
56. CCDC39 ENSGALG00000021855 23 0.798 - - - - 0.798 - - - - - coiled-coil domain containing 39
57. GUF1 ENSGALG00000014217 211 0.796 - - - - 0.796 - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
58. CRAT ENSGALG00000037443 78 0.794 - - - - 0.794 - - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
59. FAM208B 24 0.793 - - - - 0.793 - - - - - family with sequence similarity 208 member B, transcript variant X3
60. GHR ENSGALG00000014855 131 0.793 - - - - - 0.793 - - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
61. MUL1 ENSGALG00000042761 1312 0.791 - - - - 0.791 - - - - - mitochondrial E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:25762]
62. SYT10 ENSGALG00000012911 17 0.788 - - - - 0.788 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
63. SDCCAG3 1208 0.788 - - - - 0.788 - - - - - serologically defined colon cancer antigen 3
64. FRS2 ENSGALG00000009966 63 0.788 - - - - 0.788 - - - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
65. ETAA1 ENSGALG00000027922 1684 0.784 - - - - - 0.784 - - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
66. NIPAL3 ENSGALG00000004268 37 0.784 - - - - - 0.784 - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
67. PPARG ENSGALG00000004974 62 0.781 - - - - - 0.781 - - - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
68. ARNTL ENSGALG00000005378 19 0.778 - - - - - 0.778 - - - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
69. RTDR1 RTDR1 104 0.777 - - - - 0.777 - - - - -
70. C20orf96 C20orf96 10 0.776 - - - - - 0.776 - - - -
71. LRP1B ENSGALG00000012407 125 0.775 - - - - 0.775 - - - - - LDL receptor related protein 1B [Source:HGNC Symbol;Acc:HGNC:6693]
72. LARP4B ENSGALG00000006672 57 0.774 - - - - 0.774 - - - - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
73. AANAT ENSGALG00000001955 23 0.773 - - - - 0.773 - - - - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
74. GALK2 ENSGALG00000036201 1016 0.772 - - - - - 0.772 - - - - galactokinase 2 [Source:NCBI gene;Acc:415596]
75. TMEM164 ENSGALG00000008076 734 0.77 - - - - 0.770 - - - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
76. LOC100857512 ENSGALG00000026070 561 0.769 - - - - 0.769 - - - - - death-associated protein kinase 2-like, transcript variant X2
77. RUNX3 ENSGALG00000043372 43 0.768 - - - - - 0.768 - - - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
78. GMPR ENSGALG00000012705 30 0.766 - - - - - - - - - 0.766 guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
79. ERN2 ENSGALG00000027592 186 0.762 - - - - 0.762 - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
80. LIMK1 ENSGALG00000001076 1931 0.761 - - - - 0.761 - - - - - LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
81. CORO7 ENSGALG00000038325 580 0.759 - - - - - 0.759 - - - - coronin 7 [Source:NCBI gene;Acc:416670]
82. DINB1 DINB1 113 0.758 - - - - 0.758 - - - - -
83. FBXL18 ENSGALG00000004611 97 0.758 - - - - - 0.758 - - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
84. FASTKD1 ENSGALG00000009841 45 0.756 - - - - - 0.756 - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
85. DENND6A ENSGALG00000005656 831 0.754 - - - - - 0.754 - - - - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
86. SRD5A2 ENSGALG00000010625 23 0.754 - - - - - 0.754 - - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
87. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.754 - - - - - 0.754 - - - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
88. CCNJL ENSGALG00000040152 4 0.752 - - - - - 0.752 - - - - cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
89. SNX25 ENSGALG00000010610 31 0.75 - - - - - 0.750 - - - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
90. ATF2 ENSGALG00000009287 73 0.75 - - - - - 0.750 - - - - activating transcription factor 2 [Source:NCBI gene;Acc:395727]
91. CHIC2 ENSGALG00000013931 21 0.75 - - - - - 0.750 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
92. SDR42E1 ENSGALG00000005456 586 0.75 - - - - 0.750 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
93. CCDC180 109 0.747 - - - - 0.747 - - - - - coiled-coil domain containing 180
94. MARVELD3 ENSGALG00000012886 155 0.747 - - - - 0.747 - - - - - MARVEL domain containing 3
95. SKIV2L ENSGALG00000035499 45 0.745 - - - - - 0.745 - - - - Ski2 like RNA helicase [Source:HGNC Symbol;Acc:HGNC:10898]
96. IQUB ENSGALG00000008823 65 0.744 - - - - - 0.744 - - - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
97. FBXO11 ENSGALG00000008944 95 0.742 - - - - - 0.742 - - - - F-box protein 11 [Source:HGNC Symbol;Acc:HGNC:13590]
98. PRRG4 ENSGALG00000012032 96 0.742 - - - - 0.742 - - - - - proline rich and Gla domain 4 [Source:NCBI gene;Acc:421600]
99. HELQ ENSGALG00000011208 159 0.741 - - - - - 0.741 - - - - helicase, POLQ-like, transcript variant X1
100. CFD ENSGALG00000040832 222 0.74 - - - - - - - - - 0.740 complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]

There are 54 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA