Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DDX31

Gene Name Gene ID Reads Annotation
DDX31 ENSGALG00000041473 289 DEAD-box helicase 31 [Source:HGNC Symbol;Acc:HGNC:16715]











Genes with expression patterns similar to DDX31

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDX31 ENSGALG00000041473 289 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD-box helicase 31 [Source:HGNC Symbol;Acc:HGNC:16715]
2. CUBN ENSGALG00000008704 21 1.497 - - - 0.729 - - - - - 0.768 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
3. DNASE2 DNASE2 58 0.872 - - - - - - - - 0.872 -
4. ROR2 ENSGALG00000015208 1323 0.857 - - - - - - - - 0.857 - receptor tyrosine kinase like orphan receptor 2 [Source:NCBI gene;Acc:769516]
5. SS18L2 ENSGALG00000004943 214 0.848 - - - - - - - - 0.848 - SS18 like 2 [Source:HGNC Symbol;Acc:HGNC:15593]
6. CRDS2 CRDS2 22 0.836 - - - - - - - - 0.836 -
7. FGF7 ENSGALG00000028158 189 0.822 - - - - - - - - - 0.822 fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
8. SPIRE1 ENSGALG00000013817 155 0.814 - - - - - - - - 0.814 - spire type actin nucleation factor 1 [Source:HGNC Symbol;Acc:HGNC:30622]
9. DZIP1 ENSGALG00000016895 681 0.814 - - - - - - - - 0.814 - DAZ interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:20908]
10. AKAP11 ENSGALG00000022739 82 0.813 - - - - - - - - 0.813 - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
11. IKZF1 ENSGALG00000013086 58 0.798 - - - - - - - - - 0.798 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
12. ZFAT ENSGALG00000037698 34 0.793 - - - - - - - - - 0.793 zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
13. UBE2L6 ENSGALG00000046098 393 0.791 - - - - - - - - 0.791 - ubiquitin-conjugating enzyme E2L 6, transcript variant X3
14. C16orf72 ENSGALG00000007291 228 0.79 - - - - - - - - - 0.790 chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
15. PPTC7 ENSGALG00000004550 154 0.789 - - - - - - - - 0.789 - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
16. STIL ENSGALG00000010478 1398 0.788 - - - - - - - - 0.788 - STIL, centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]
17. MANSC4 32 0.788 - - - - - - - - - 0.788 MANSC domain containing 4, transcript variant X1
18. GABRD ENSGALG00000001282 8 0.788 - - - - - - - - - 0.788 gamma-aminobutyric acid type A receptor delta subunit [Source:HGNC Symbol;Acc:HGNC:4084]
19. ENTPD5 ENSGALG00000010202 69 0.78 - - - - - - - - - 0.780 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
20. C1orf74 ENSGALG00000001378 39 0.78 - - - - - - - - - 0.780 chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
21. TRIM63 ENSGALG00000034107 524 0.779 - - - - - - - - 0.779 - tripartite motif containing 63 [Source:HGNC Symbol;Acc:HGNC:16007]
22. CHTF18 ENSGALG00000040157 2140 0.775 - - - - - - - - 0.775 - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
23. FMN1 ENSGALG00000009723 100 0.772 - - - - - - - - - 0.772 formin 1 [Source:NCBI gene;Acc:386747]
24. HTATIP2 ENSGALG00000002581 529 0.77 - - - - - - - - - 0.770 HIV-1 Tat interactive protein 2, transcript variant X2
25. FRRS1 ENSGALG00000005418 332 0.768 - - - - - - - - - 0.768 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
26. COL25A1 ENSGALG00000039411 5 0.768 - - - - - - - - - 0.768 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
27. LYG2 ENSGALG00000016761 7 0.768 - - - - - - - - - 0.768 lysozyme g2 [Source:NCBI gene;Acc:395708]
28. XKRX ENSGALG00000006637 13 0.768 - - - - - - - - - 0.768 XK related, X-linked, transcript variant X4
29. VIPR1 ENSGALG00000005259 3 0.768 - - - - - - - - - 0.768 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
30. SNORA53 SNORA53 6 0.768 - - - - - - - - - 0.768
31. CKV6.3 CKV6.3 13 0.768 - - - - - - - - - 0.768
32. BF1 ENSGALG00000033932 18 0.768 - - - - - - - - - 0.768 MHC BF1 class I [Source:NCBI gene;Acc:693260]
33. ENSGALG00000026222 ENSGALG00000026222 3 0.768 - - - - - - - - - 0.768
34. ZBTB6 ENSGALG00000021570 15 0.767 - - - - - - - - - 0.767 zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
35. GABRB4 GABRB4 12 0.766 - - - - - - - - - 0.766
36. SORL1 ENSGALG00000006598 39 0.765 - - - - - - - - - 0.765 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
37. ASB3 ENSGALG00000008176 5422 0.764 - - - - - - - - 0.764 - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
38. COL23A1 ENSGALG00000006708 181 0.76 - - - - - - - - - 0.760 collagen type XXIII alpha 1 chain, transcript variant X1
39. CEP78 ENSGALG00000015179 5227 0.759 - - - - - - - - 0.759 - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
40. ANKRD28 ENSGALG00000011226 160 0.758 - - - 0.758 - - - - - - ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
41. CRYBA1 ENSGALG00000004035 176 0.757 - - - 0.757 - - - - - - crystallin beta A1 [Source:NCBI gene;Acc:396499]
42. RYR2 ENSGALG00000010812 95 0.755 - - - 0.755 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
43. PITPNM1 ENSGALG00000034939 1031 0.753 - - - 0.753 - - - - - - phosphatidylinositol transfer protein membrane associated 1 [Source:HGNC Symbol;Acc:HGNC:9003]
44. ENSGALG00000021706 ENSGALG00000021706 186 0.751 - - - - - - - - 0.751 -
45. ATAD2 ENSGALG00000034348 4440 0.751 - - - - - - - - 0.751 - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
46. CARD9 ENSGALG00000001889 83 0.751 - - - - - - - - - 0.751 caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]
47. LOC417937 ENSGALG00000011717 31 0.75 - - - - - - - - - 0.750 solute carrier family 23 member 1-like, transcript variant X1
48. TMTC1 ENSGALG00000012956 160 0.75 - - - - - - - - - 0.750 transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
49. GP130 GP130 42 0.748 - - - - - - - - - 0.748
50. ARHGAP15 ENSGALG00000012421 58 0.747 - - - - - - - - - 0.747 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
51. FAM126B ENSGALG00000020869 19 0.745 - - - - - - - - - 0.745 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
52. GRHL1 ENSGALG00000038495 221 0.745 - - - - - - - - - 0.745 grainyhead like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:17923]
53. TAF8 ENSGALG00000003498 2071 0.745 - - - - - - - - 0.745 - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
54. SBF2 ENSGALG00000005716 134 0.745 - - - - - - 0.745 - - - SET binding factor 2 [Source:NCBI gene;Acc:423043]
55. EPG5 ENSGALG00000036259 71 0.744 - - - - - - - - - 0.744 ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
56. CHSY3 ENSGALG00000026899 80 0.743 - - - - - - - - - 0.743 chondroitin sulfate synthase 3 [Source:HGNC Symbol;Acc:HGNC:24293]
57. AREG ENSGALG00000010866 16 0.742 - - - - - - - - - 0.742 amphiregulin [Source:NCBI gene;Acc:428752]
58. GRIN2A ENSGALG00000007278 17 0.741 - - - 0.741 - - - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
59. EPB41L4A ENSGALG00000000234 113 0.74 - - - 0.740 - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
60. TC2N ENSGALG00000010738 92 0.74 - - - - - - - - - 0.740 tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
61. BFIV21 BFIV21 30 0.74 - - - 0.740 - - - - - -
62. CHADL ENSGALG00000011970 42 0.739 - - - - - - - - - 0.739 chondroadherin-like [Source:NCBI gene;Acc:417998]
63. C8B ENSGALG00000010853 21 0.737 - - - 0.737 - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
64. CDKL5 ENSGALG00000016529 26 0.737 - - - - - - - - - 0.737 cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
65. PTPRJ ENSGALG00000006382 891 0.737 - - - - - - - - 0.737 - protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
66. MMR1L3 ENSGALG00000008638 26 0.737 - - - 0.737 - - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
67. AIM1 51 0.736 - - - 0.736 - - - - - - absent in melanoma 1, transcript variant X2
68. MYOG ENSGALG00000000172 460 0.735 - - - - - - - - - 0.735 myogenin [Source:NCBI gene;Acc:374004]
69. CEP250 ENSGALG00000026151 163 0.734 - - - - - - - - - 0.734 centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
70. LRBA ENSGALG00000010061 67 0.733 - - - - - - - - - 0.733 LPS responsive beige-like anchor protein [Source:HGNC Symbol;Acc:HGNC:1742]
71. PROC ENSGALG00000001780 26 0.732 - - - 0.732 - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
72. MUC5B MUC5B 62 0.732 - - - - - - - - - 0.732
73. AQP3 ENSGALG00000002452 97 0.732 - - - - - - - - - 0.732 aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
74. ZMYM4 ENSGALG00000002499 435 0.732 - - - 0.732 - - - - - - zinc finger MYM-type containing 4, transcript variant X1
75. IL34 ENSGALG00000028466 270 0.731 - - - - - - - - - 0.731 interleukin 34
76. ENSGALG00000001734 ENSGALG00000001734 408 0.73 - - - - - - - - - 0.730
77. CFAP74 ENSGALG00000001288 54 0.73 - - - 0.730 - - - - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
78. OSBP2 ENSGALG00000007758 331 0.73 - - - 0.730 - - - - - - oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]
79. ENSGALG00000010336 ENSGALG00000010336 16 0.73 - - - 0.730 - - - - - -
80. VPS45 ENSGALG00000013899 154 0.729 - - - 0.729 - - - - - - vacuolar protein sorting 45 homolog [Source:NCBI gene;Acc:430741]
81. NDUFA7 ENSGALG00000000629 14046 0.728 - - - - - - - - 0.728 - NADH:ubiquinone oxidoreductase subunit A7
82. PEAK1 ENSGALG00000002759 39 0.728 - - - - - - - - - 0.728 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
83. CCDC147 CCDC147 53 0.727 - - - - - - - - - 0.727
84. ELF2 ENSGALG00000009774 83 0.721 - - - - - - - - 0.721 - E74 like ETS transcription factor 2, transcript variant X5
85. ECHDC1 ENSGALG00000014828 958 0.719 - - - 0.719 - - - - - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
86. SPG11 ENSGALG00000008180 1890 0.719 - - - 0.719 - - - - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
87. RPLP1 ENSGALG00000030878 445592 0.719 - - - 0.719 - - - - - - ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
88. CABP1 ENSGALG00000007116 54 0.718 - - - 0.718 - - - - - - calcium binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1384]
89. LGALS1_1 ENSGALG00000012420 1560 0.718 - - - - - - - - - 0.718 galectin 1 [Source:NCBI gene;Acc:396491]
90. KIAA1549L ENSGALG00000012020 33 0.717 - - - - - - - - - 0.717 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
91. TMC7 ENSGALG00000006889 125 0.714 - - - 0.714 - - - - - - transmembrane channel like 7 [Source:NCBI gene;Acc:416610]
92. LSM14B ENSGALG00000005125 31 0.714 - - - - - - - - - 0.714 LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
93. ERCC8 ENSGALG00000014732 1181 0.714 - - - 0.714 - - - - - - ERCC excision repair 8, CSA ubiquitin ligase complex subunit [Source:HGNC Symbol;Acc:HGNC:3439]
94. ADAP2 ENSGALG00000003319 134 0.713 - - - 0.713 - - - - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
95. GABRG4 GABRG4 16 0.713 - - - - - - - - - 0.713
96. SUFU ENSGALG00000008096 307 0.713 - - - - - - - - - 0.713 SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
97. NTF3 ENSGALG00000027299 72 0.711 - - - - - - - - - 0.711 neurotrophin 3 [Source:NCBI gene;Acc:428099]
98. SERPINB14 SERPINB14 196 0.711 - - - - - - - - - 0.711
99. PRLR ENSGALG00000003446 19 0.711 - - - - - - - - - 0.711 prolactin receptor [Source:NCBI gene;Acc:395660]
100. VASH1 ENSGALG00000043036 1235 0.71 - - - 0.710 - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]

There are 15 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA