Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL4A3

Gene Name Gene ID Reads Annotation
COL4A3 ENSGALG00000038612 41 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]











Genes with expression patterns similar to COL4A3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL4A3 ENSGALG00000038612 41 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
2. MUT ENSGALG00000016697 43 2 - - - - - - 1.000 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
3. SCN4B ENSGALG00000007409 22 1.941 - - - - - - 0.941 1.000 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
4. gga-mir-218-1 ENSGALG00000018327 3 1.855 - - - - - - - 1.000 - 0.855 gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
5. TRAF6 ENSGALG00000007932 12 1.855 - - - - - - - 1.000 - 0.855 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
6. MYO1D ENSGALG00000000674 14 1.789 - - - - - - 0.789 1.000 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
7. SLC6A6 ENSGALG00000006425 31 1.77 - - - 0.770 - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
8. ENSGALG00000005482 ENSGALG00000005482 1 1.77 - - - 0.770 - - - 1.000 - -
9. FLT4 ENSGALG00000005802 5 1.77 - - - 0.770 - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
10. SMTN 18 1.742 - - - - - - - 1.000 - 0.742 smoothelin, transcript variant X2
11. EHD4 ENSGALG00000008950 22 1.499 - - - 0.750 0.749 - - - - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
12. LOC100857820 ENSGALG00000001824 16 1 - - - - - - - 1.000 - - uncharacterized LOC100857820
13. CREB3L1 ENSGALG00000008393 3 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
14. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
15. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
16. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
17. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
18. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
19. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
20. RASSF6 ENSGALG00000011664 7 1 - - - - - - - 1.000 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
21. BAFF BAFF 40 1 - - - - - - - 1.000 - -
22. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
23. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
24. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
25. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
26. PHACTR3 250 1 - - - - - - - 1.000 - - phosphatase and actin regulator 3, transcript variant X4
27. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - 1.000 - -
28. LAMC1 ENSGALG00000004620 11 1 - - - - - - - 1.000 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
29. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
30. ENSGALG00000020738 ENSGALG00000020738 2 1 - - - - 1.000 - - - - -
31. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
32. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
33. CBLN1 ENSGALG00000042664 15 1 - - - - - - - 1.000 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
34. MEIOB ENSGALG00000005411 6 1 - - - - - - - 1.000 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
35. KCNK16 ENSGALG00000020049 0 1 - - - - - - - 1.000 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
36. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
37. C1H7ORF60 C1H7ORF60 3 1 - - - - - - - 1.000 - -
38. LRCH1 ENSGALG00000016990 17 1 - - - - - - - 1.000 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
39. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - 1.000 - -
40. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
41. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
42. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
43. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
44. TIMP4 ENSGALG00000004969 21 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
45. ENSGALG00000019602 ENSGALG00000019602 2 1 - - - - - - - 1.000 - -
46. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
47. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
48. UPK3B 4 1 - - - - - - - 1.000 - - uroplakin 3B
49. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
50. PAPPA ENSGALG00000007079 6 1 - - - - - - - 1.000 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
51. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
52. ENSGALG00000028737 ENSGALG00000028737 24 1 - - - - - - - 1.000 - -
53. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - 1.000 - -
54. DNAH14 ENSGALG00000045078 1 1 - - - - - - - 1.000 - - dynein, axonemal, heavy chain 14
55. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
56. COG3 ENSGALG00000016980 15 1 - - - - - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
57. SEC16B ENSGALG00000004424 4 1 - - - - - - - 1.000 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
58. PLEKHA1 ENSGALG00000034548 34 1 - - - - 1.000 - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
59. CFTII CFTII 6 1 - - - - - - - 1.000 - -
60. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - - 1.000 - -
61. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
62. NME8 ENSGALG00000029677 2 1 - - - - - - - 1.000 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
63. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
64. SLC6A4 ENSGALG00000004246 5 1 - - - - - - - 1.000 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
65. SLC39A12 ENSGALG00000008602 6 1 - - - - - - - 1.000 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
66. ADAMTS8 ENSGALG00000001370 0 1 - - - - - - - 1.000 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
67. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
68. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
69. TERF2IP ENSGALG00000000903 41 1 - - - - - - - 1.000 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
70. ENSGALG00000029127 ENSGALG00000029127 2 1 - - - - - - - 1.000 - -
71. ACKR2 ENSGALG00000005305 0 1 - - - - - - - 1.000 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
72. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
73. CLDN15 ENSGALG00000038964 21 1 - - - - - - - 1.000 - - claudin 15, transcript variant X4
74. HPGD ENSGALG00000010769 5 1 - - - - - - - 1.000 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
75. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
76. ENSGALG00000012391 ENSGALG00000012391 0 1 - - - - - - - 1.000 - -
77. FGF13 ENSGALG00000006508 8 1 - - - - 1.000 - - - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
78. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
79. IL12RB1 28 1 - - - - - - - 1.000 - - interleukin 12 receptor subunit beta 1, transcript variant X4
80. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
81. CCNT2 ENSGALG00000012207 14 1 - - - - - - - 1.000 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
82. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
83. SH3GL3 ENSGALG00000006045 12 1 - - - - - - - 1.000 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
84. LICOS LICOS 13 1 - - - - - - - 1.000 - -
85. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
86. CERKL ENSGALG00000008910 70 1 - - - - - - - 1.000 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
87. HSPB7L ENSGALG00000028183 795 1 - - - - - - - 1.000 - - heat shock protein beta-7-like
88. SCG5 ENSGALG00000009725 10 1 - - - - - - - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
89. EIF4H ENSGALG00000001313 59 1 - - - - - - - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
90. GRM3 ENSGALG00000006576 474 1 - - - - - - - 1.000 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
91. CLVS1 ENSGALG00000043172 56 1 - - - - - - - 1.000 - - clavesin 1
92. TNIP2 ENSGALG00000015666 28 1 - - - - - - - 1.000 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
93. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
94. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
95. TMEM204 ENSGALG00000029047 8 1 - - - - - - - 1.000 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
96. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
97. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
98. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
99. RBL2 ENSGALG00000003663 10 1 - - - - - - - 1.000 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
100. MMP27 ENSGALG00000019060 19 1 - - - - - - - 1.000 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA