Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COL4A2

Gene Name Gene ID Reads Annotation
COL4A2 ENSGALG00000016843 261 collagen type IV alpha 2 chain [Source:NCBI gene;Acc:418752]











Genes with expression patterns similar to COL4A2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL4A2 ENSGALG00000016843 261 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen type IV alpha 2 chain [Source:NCBI gene;Acc:418752]
2. TP53I3 ENSGALG00000016502 178 1.575 - - - - - - 0.858 0.717 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
3. NPTN ENSGALG00000001741 481 1.525 - - - - - - 0.798 0.727 - - neuroplastin [Source:NCBI gene;Acc:415316]
4. CCDC40 ENSGALG00000007042 596 1.468 - - 0.720 - - - 0.748 - - - coiled-coil domain containing 40 [Source:HGNC Symbol;Acc:HGNC:26090]
5. GHDC ENSGALG00000003333 178 0.905 - - - - - - 0.905 - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
6. KRT222 ENSGALG00000003859 53 0.892 - - - - - - 0.892 - - - keratin 222 [Source:NCBI gene;Acc:420046]
7. LMCD1 ENSGALG00000008349 928 0.891 - - - - - - 0.891 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
8. NCOA6 ENSGALG00000001182 83 0.884 - - - - - - 0.884 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
9. PCGF2 ENSGALG00000018815 38 0.884 - - - - - - 0.884 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
10. C9orf171 C9orf171 35 0.871 - - - - - - 0.871 - - -
11. ENDOV 121 0.866 - - - - - - 0.866 - - - endonuclease V
12. MOCOS ENSGALG00000013149 25 0.862 - - - - - - 0.862 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
13. PDE4D ENSGALG00000014727 53 0.862 - - - - - - 0.862 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
14. ANO3 ENSGALG00000013311 16 0.856 - - - - - - 0.856 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
15. C18H17ORF67 ENSGALG00000024428 10 0.856 - - - - - - 0.856 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
16. TEX2 ENSGALG00000003496 23 0.856 - - - - - - 0.856 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
17. MUC5B MUC5B 62 0.856 - - - - - - 0.856 - - -
18. ENSGALG00000023475 ENSGALG00000023475 19 0.856 - - - - - - 0.856 - - -
19. DCBLD1 ENSGALG00000014907 19 0.856 - - - - - - 0.856 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
20. CPNE1 ENSGALG00000040856 610 0.854 - - - - - - 0.854 - - - copine 1 [Source:NCBI gene;Acc:419134]
21. PYROXD1 ENSGALG00000013173 89 0.853 - - - - - - 0.853 - - - pyridine nucleotide-disulphide oxidoreductase domain 1 [Source:NCBI gene;Acc:418191]
22. NAPRT1 NAPRT1 227 0.851 - - - - - - 0.851 - - -
23. LAMP1 ENSGALG00000037697 247 0.85 - - - - - - 0.850 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
24. RSFR 61 0.85 - - - - - - 0.850 - - - leukocyte ribonuclease A-2
25. ENSGALG00000001515 ENSGALG00000001515 833 0.849 - - - - - - 0.849 - - -
26. LOC770996 ENSGALG00000016570 635 0.849 - - - - - - 0.849 - - - L-gulonolactone oxidase-like
27. ASB13 ENSGALG00000008401 181 0.848 - - - - - - 0.848 - - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
28. CADM2 ENSGALG00000043393 810 0.846 - - - - - - 0.846 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
29. RIPPLY2 ENSGALG00000015845 34 0.846 - - - - - - 0.846 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
30. LRRC2 ENSGALG00000013634 69 0.846 - - - - - - 0.846 - - - leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
31. ENSGALG00000020753 ENSGALG00000020753 159 0.846 - - - - - - 0.846 - - -
32. ENSGALG00000024048 ENSGALG00000024048 50 0.845 - - 0.845 - - - - - - -
33. VTI1B ENSGALG00000009526 133 0.844 - - - - - - 0.844 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
34. PQLC3 ENSGALG00000016449 39 0.843 - - 0.843 - - - - - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
35. SVOPL ENSGALG00000012812 27 0.843 - - - - - - 0.843 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
36. FGB ENSGALG00000009262 1169 0.843 - - - - - - 0.843 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
37. MAP3K1 ENSGALG00000014718 60 0.842 - - - - - - 0.842 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
38. ANKS1B ENSGALG00000011549 440 0.842 - - - - - - 0.842 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
39. MLF1 ENSGALG00000009654 619 0.841 - - - - - - 0.841 - - - myeloid leukemia factor 1, transcript variant X3
40. NKD1 ENSGALG00000003767 76 0.84 - - - - - - 0.840 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
41. FGF7 ENSGALG00000028158 189 0.839 - - 0.839 - - - - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
42. TC2N ENSGALG00000010738 92 0.839 - - - - - - 0.839 - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
43. PARK2 166 0.839 - - 0.839 - - - - - - - parkin RBR E3 ubiquitin protein ligase
44. FAM82B FAM82B 374 0.838 - - - - - - 0.838 - - -
45. YTHDC1 ENSGALG00000035906 471 0.837 - - - - - - 0.837 - - - YTH domain containing 1 [Source:NCBI gene;Acc:422656]
46. POFUT1 ENSGALG00000006594 367 0.834 - - - - - - 0.834 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
47. FBXL18 ENSGALG00000004611 97 0.833 - - - - - - 0.833 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
48. CTSS ENSGALG00000000775 591 0.832 - - 0.832 - - - - - - - cathepsin S [Source:NCBI gene;Acc:425657]
49. ENSGALG00000029120 ENSGALG00000029120 73 0.832 - - - - - - 0.832 - - -
50. PARVA ENSGALG00000005438 91 0.831 - - - - - - 0.831 - - - parvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]
51. LOC100857820 ENSGALG00000001824 16 0.83 - - - - - - 0.830 - - - uncharacterized LOC100857820
52. HTR2C ENSGALG00000005853 90 0.83 - - - - - - 0.830 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
53. TSPAN14 ENSGALG00000002414 69 0.83 - - - - - - 0.830 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
54. ALPK3 ENSGALG00000037950 54 0.829 - - 0.829 - - - - - - - alpha kinase 3 [Source:HGNC Symbol;Acc:HGNC:17574]
55. MKL2 186 0.829 - - - - - - 0.829 - - - MKL1/myocardin like 2, transcript variant X4
56. OSGIN1 ENSGALG00000003323 7 0.828 - - 0.828 - - - - - - - oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]
57. SCG2 ENSGALG00000029819 26 0.828 - - 0.828 - - - - - - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
58. ADCYAP1 ENSGALG00000014858 9 0.828 - - 0.828 - - - - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
59. AOX1 ENSGALG00000008185 14 0.828 - - 0.828 - - - - - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
60. ATMIN ENSGALG00000040475 16 0.828 - - 0.828 - - - - - - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
61. LOC771308 ENSGALG00000000274 7 0.828 - - 0.828 - - - - - - - growth hormone releasing hormone receptor, transcript variant X2
62. MMR1L2 ENSGALG00000028357 7 0.828 - - 0.828 - - - - - - - Gallus gallus macrophage mannose receptor 1-like 2 (MMR1L2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319010]
63. SLC38A9 ENSGALG00000014712 16 0.828 - - 0.828 - - - - - - - solute carrier family 38 member 9 [Source:HGNC Symbol;Acc:HGNC:26907]
64. RAB3C ENSGALG00000014726 10 0.828 - - 0.828 - - - - - - - RAB3C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30269]
65. TEX33 ENSGALG00000012490 11 0.828 - - 0.828 - - - - - - - testis expressed 33, transcript variant X2
66. FAR-2 FAR-2 24 0.828 - - 0.828 - - - - - - -
67. SGMS2 ENSGALG00000010535 42 0.828 - - 0.828 - - - - - - - sphingomyelin synthase 2 [Source:NCBI gene;Acc:422529]
68. ELFN2 ENSGALG00000012446 11 0.827 - - 0.827 - - - - - - - extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
69. SEH1L ENSGALG00000013872 315 0.827 - - 0.827 - - - - - - - SEH1 like nucleoporin [Source:HGNC Symbol;Acc:HGNC:30379]
70. ZC3H12B ENSGALG00000039391 39 0.826 - - 0.826 - - - - - - - zinc finger CCCH-type containing 12B [Source:HGNC Symbol;Acc:HGNC:17407]
71. SK2 SK2 74 0.824 - - 0.824 - - - - - - -
72. ENSGALG00000014900 ENSGALG00000014900 335 0.824 - - - - - - 0.824 - - -
73. KCTD5 ENSGALG00000006423 192 0.824 - - - - - - 0.824 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
74. PTPRN2 ENSGALG00000030054 947 0.823 - - - - - - 0.823 - - - protein tyrosine phosphatase, receptor type N2 [Source:HGNC Symbol;Acc:HGNC:9677]
75. PTPRE ENSGALG00000009823 250 0.823 - - 0.823 - - - - - - - protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
76. HNF4G ENSGALG00000042621 484 0.822 - - - - - - 0.822 - - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
77. CLDN15 ENSGALG00000038964 21 0.821 - - 0.821 - - - - - - - claudin 15, transcript variant X4
78. SNORD2 SNORD2 51 0.821 - - - - - - 0.821 - - -
79. FAM104A ENSGALG00000026401 162 0.821 - - 0.821 - - - - - - - family with sequence similarity 104 member A [Source:NCBI gene;Acc:417450]
80. AGL ENSGALG00000005407 93 0.821 - - - - - - 0.821 - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
81. TSPAN4 ENSGALG00000006837 150 0.82 - - - - - - 0.820 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
82. FAM76B ENSGALG00000017202 688 0.819 - - - - - - 0.819 - - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]
83. PLCXD1 ENSGALG00000016721 289 0.819 - - - - - - 0.819 - - - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
84. BBS12 142 0.818 - - - - - - 0.818 - - - Bardet-Biedl syndrome 12
85. KLHDC3 ENSGALG00000008536 1961 0.818 - - 0.818 - - - - - - - kelch domain containing 3 [Source:HGNC Symbol;Acc:HGNC:20704]
86. TDRD5 ENSGALG00000033634 40 0.818 - - - - - - 0.818 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
87. DPEP2 ENSGALG00000003433 109 0.818 - - - - - - 0.818 - - - dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
88. PTPRF ENSGALG00000010053 27 0.818 - - 0.818 - - - - - - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
89. ENKD1 ENSGALG00000001204 362 0.817 - - - - - - 0.817 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
90. MAP3K21 ENSGALG00000011008 54 0.817 - - 0.817 - - - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
91. RELN ENSGALG00000008193 43 0.817 - - - - - - 0.817 - - - reelin [Source:NCBI gene;Acc:427850]
92. ATP6V1AL ENSGALG00000000048 21 0.816 - - - - - - 0.816 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
93. ALOX5 ENSGALG00000005857 73 0.814 - - 0.814 - - - - - - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
94. ENSGALG00000012463 ENSGALG00000012463 242 0.814 - - - - - - 0.814 - - -
95. MMR1L4 ENSGALG00000028304 81 0.813 - - - - - - 0.813 - - - Gallus gallus macrophage mannose receptor 1-like 4 (MMR1L4), mRNA. [Source:RefSeq mRNA;Acc:NM_001319013]
96. TRIM71 ENSGALG00000019622 1633 0.813 - - - - - - 0.813 - - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
97. FAM21A FAM21A 251 0.812 - - - - - - 0.812 - - -
98. ENSGALG00000026496 ENSGALG00000026496 9 0.81 - - 0.810 - - - - - - -
99. SLC4A10 ENSGALG00000030032 56 0.809 - - 0.809 - - - - - - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
100. ARHGAP15 ENSGALG00000012421 58 0.809 - - - - - - 0.809 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]

There are 200 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA