Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHDH

Gene Name Gene ID Reads Annotation
CHDH ENSGALG00000005363 910 choline dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24288]











Genes with expression patterns similar to CHDH

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHDH ENSGALG00000005363 910 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 choline dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24288]
2. MMRN2 770 1.452 - - - - - - 0.734 - 0.718 - multimerin 2, transcript variant X1
3. ARHGAP15 ENSGALG00000012421 58 0.856 - - - - - 0.856 - - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
4. TRPV6 ENSGALG00000014746 3 0.854 - - - - - 0.854 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
5. C15orf60 C15orf60 16 0.854 - - - - - 0.854 - - - -
6. ASB15 ENSGALG00000008814 7 0.854 - - - - - 0.854 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
7. REM1 ENSGALG00000045602 4 0.854 - - - - - 0.854 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
8. LCT ENSGALG00000012260 21 0.854 - - - - - 0.854 - - - - lactase [Source:NCBI gene;Acc:424294]
9. ENSGALG00000008309 ENSGALG00000008309 7 0.854 - - - - - 0.854 - - - -
10. MRAP2 ENSGALG00000015838 7 0.854 - - - - - 0.854 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
11. CHRNB3 ENSGALG00000015384 9 0.854 - - - - - 0.854 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
12. TMEM56 ENSGALG00000005580 10 0.854 - - - - - 0.854 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
13. ENSGALG00000016499 ENSGALG00000016499 4 0.854 - - - - - 0.854 - - - -
14. C1QTNF4 ENSGALG00000008080 3 0.854 - - - - - 0.854 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
15. HSD11B1b ENSGALG00000001369 1 0.854 - - - - - 0.854 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
16. LOC396365 ENSGALG00000027219 7 0.854 - - - - - 0.854 - - - - preprogastrin
17. CPSF4L ENSGALG00000004441 4 0.854 - - - - - 0.854 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
18. SLC51A ENSGALG00000007478 6 0.854 - - - - - 0.854 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
19. TGIF2 ENSGALG00000024081 21 0.845 - - - - - 0.845 - - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
20. C14orf159 C14orf159 7 0.84 - - - - - 0.840 - - - -
21. GPATCH8 ENSGALG00000041556 484 0.838 - - - - - - - - 0.838 - G-patch domain containing 8 [Source:HGNC Symbol;Acc:HGNC:29066]
22. LUZP2 ENSGALG00000030151 585 0.838 - - - - - 0.838 - - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
23. CD200R1A CD200R1A 105 0.835 - - - - - 0.835 - - - -
24. ENSGALG00000027143 ENSGALG00000027143 23 0.835 - - - - - 0.835 - - - -
25. ENSGALG00000010218 ENSGALG00000010218 12 0.834 - - - - - 0.834 - - - -
26. IL1RAP ENSGALG00000007253 6 0.834 - - - - - 0.834 - - - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
27. IKBIP ENSGALG00000026284 31 0.828 - - - - - 0.828 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
28. MAP3K2 42 0.827 - - - - - - - - 0.827 - mitogen-activated protein kinase kinase kinase 2, transcript variant X3
29. MPP7 ENSGALG00000007408 2485 0.82 - - - - - - - - 0.820 - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
30. GJB1 ENSGALG00000005541 261 0.817 - - - - - - - - 0.817 - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
31. PPARG ENSGALG00000004974 62 0.813 - - - - - 0.813 - - - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
32. FIBCD1 ENSGALG00000003866 2 0.813 - - - - - 0.813 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
33. RUNX3 ENSGALG00000043372 43 0.81 - - - - - 0.810 - - - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
34. CNKSR2 ENSGALG00000016391 131 0.81 - - - - - - - - 0.810 - connector enhancer of kinase suppressor of Ras 2, transcript variant X1
35. NIPAL3 ENSGALG00000004268 37 0.81 - - - - - 0.810 - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
36. GPR20 ENSGALG00000041730 1926 0.809 - - - - - - - - 0.809 - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
37. SGK196 SGK196 83 0.807 - - - - - 0.807 - - - -
38. C20orf96 C20orf96 10 0.807 - - - - - 0.807 - - - -
39. ENSGALG00000027849 ENSGALG00000027849 320 0.804 - - - - - - - - 0.804 -
40. NXT2 ENSGALG00000008092 2477 0.801 - - - - - - - - 0.801 - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
41. CHIC2 ENSGALG00000013931 21 0.799 - - - - - 0.799 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
42. HEXDC ENSGALG00000039839 936 0.798 - - - - - - - - 0.798 - hexosaminidase D [Source:HGNC Symbol;Acc:HGNC:26307]
43. TRDN ENSGALG00000014848 130 0.796 - - - - - - - - 0.796 - triadin
44. ARPC1B ENSGALG00000032588 2407 0.796 - - - - - - 0.796 - - - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
45. UBE2E1 ENSGALG00000011286 5483 0.796 - - - - - 0.796 - - - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
46. BDH2 ENSGALG00000012338 2446 0.795 - - - - - 0.795 - - - - 3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
47. SUFU ENSGALG00000008096 307 0.795 - - - - - 0.795 - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
48. RLF ENSGALG00000000862 586 0.794 - - - - - - - - 0.794 - rearranged L-myc fusion [Source:HGNC Symbol;Acc:HGNC:10025]
49. GHR ENSGALG00000014855 131 0.794 - - - - - 0.794 - - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
50. CPEB1 ENSGALG00000002150 335 0.794 - - - - - - - - 0.794 - cytoplasmic polyadenylation element binding protein 1 [Source:NCBI gene;Acc:415326]
51. UBE2K ENSGALG00000014290 2138 0.792 - - - - - - - - 0.792 - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
52. ENSGALG00000001886 ENSGALG00000001886 1024 0.79 - - - - - - - - 0.790 -
53. EX-FABP EX-FABP 516 0.789 - - - - - - - - 0.789 -
54. MAMLD1 ENSGALG00000009098 1231 0.789 - - - - - - - - 0.789 - mastermind like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:2568]
55. MTMR7 13 0.788 - - - - - 0.788 - - - - myotubularin related protein 7, transcript variant X1
56. SUZ12 ENSGALG00000003277 177 0.786 - - - - - - - - 0.786 - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
57. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.786 - - - - - 0.786 - - - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
58. RAD51A RAD51A 2132 0.785 - - - - - - - - 0.785 -
59. DIS3 ENSGALG00000016930 3696 0.784 - - - - - - - - 0.784 - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
60. RB1CC1 ENSGALG00000015259 4211 0.783 - - - - - - 0.783 - - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
61. PCDH7 ENSGALG00000033883 6 0.783 - - - - - 0.783 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
62. CCNJL ENSGALG00000040152 4 0.781 - - - - - 0.781 - - - - cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
63. NCAPH ENSGALG00000032270 2103 0.78 - - - - - - - - 0.780 - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
64. PHLPP1 ENSGALG00000012888 398 0.779 - - - - - - - - 0.779 - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
65. IRAK4 ENSGALG00000009586 289 0.779 - - - - - - - - 0.779 - interleukin 1 receptor associated kinase 4 [Source:NCBI gene;Acc:417796]
66. CASP7 ENSGALG00000008933 506 0.778 - - - - - 0.778 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
67. TICRR ENSGALG00000006631 495 0.775 - - - - - - - - 0.775 - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
68. SOX6 ENSGALG00000006074 102 0.774 - - - - - - - - 0.774 - Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
69. FUCA1 ENSGALG00000004112 2154 0.774 - - - - - - - - 0.774 - alpha-L-fucosidase 1 [Source:HGNC Symbol;Acc:HGNC:4006]
70. PARVG ENSGALG00000014203 339 0.77 - - - - - - - - 0.770 - parvin gamma [Source:HGNC Symbol;Acc:HGNC:14654]
71. MCCC1 ENSGALG00000008785 1376 0.77 - - - - - - - - 0.770 - methylcrotonoyl-CoA carboxylase 1 [Source:NCBI gene;Acc:424962]
72. XPC ENSGALG00000006357 2484 0.77 - - - - - - - - 0.770 - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
73. PAK2 ENSGALG00000006426 283 0.769 - - - - - - - - 0.769 - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
74. STK3 ENSGALG00000032850 6339 0.768 - - - - - - - 0.768 - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
75. AMMECR1L ENSGALG00000026728 2134 0.767 - - - - - - - - 0.767 - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
76. JMJD1C ENSGALG00000002942 4556 0.767 - - - - - - - - 0.767 - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
77. HMGB3 ENSGALG00000009071 12011 0.765 - - - - - - - 0.765 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
78. SMAP1 ENSGALG00000015959 4665 0.764 - - - - - 0.764 - - - - small ArfGAP 1 [Source:HGNC Symbol;Acc:HGNC:19651]
79. UPK3BL ENSGALG00000001885 1650 0.764 - - - - - 0.764 - - - - uroplakin 3B-like
80. MAP3K8 ENSGALG00000007356 188 0.762 - - - - - 0.762 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
81. FER ENSGALG00000000273 80 0.761 - - - - - 0.761 - - - - FER tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3655]
82. FASTKD1 ENSGALG00000009841 45 0.759 - - - - - 0.759 - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
83. EDN3 ENSGALG00000040880 1061 0.758 - - - - - - - - 0.758 - endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]
84. CA8 ENSGALG00000039145 109 0.758 - - - - - 0.758 - - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
85. ETAA1 ENSGALG00000027922 1684 0.758 - - - - - 0.758 - - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
86. FAM65C 36 0.758 - - - - - 0.758 - - - - family with sequence similarity 65 member C, transcript variant X29
87. C15orf26 C15orf26 21 0.757 - - - - - 0.757 - - - -
88. S100A9 ENSGALG00000024272 103 0.757 - - - - - 0.757 - - - - S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
89. C1QL1 ENSGALG00000028031 788 0.756 - - - - - - - - 0.756 - complement C1q like 1 [Source:HGNC Symbol;Acc:HGNC:24182]
90. TECPR2 ENSGALG00000011373 1063 0.755 - - - - - - - - 0.755 - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
91. CLEC3B ENSGALG00000030969 363 0.754 - - - - - 0.754 - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
92. RBMS3 ENSGALG00000011439 25 0.754 - - - - - - - - 0.754 - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
93. TDRD1 ENSGALG00000046180 612 0.753 - - - - - 0.753 - - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
94. PLA2G10L ENSGALG00000019233 11 0.753 - - - - - 0.753 - - - - phospholipase A2 group X-like, transcript variant X2
95. ZRANB1 ENSGALG00000031474 3909 0.752 - - - - - - - 0.752 - - zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
96. FIG4 ENSGALG00000015070 3018 0.751 - - - - - - - - 0.751 - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
97. ERCC4 ENSGALG00000002981 1178 0.751 - - - - - - - - 0.751 - Gallus gallus ERCC excision repair 4, endonuclease catalytic subunit (ERCC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318411]
98. TFB2M ENSGALG00000010651 4374 0.749 - - - - - - - 0.749 - - transcription factor B2, mitochondrial
99. HEP21 ENSGALG00000000115 117 0.749 - - - - - 0.749 - - - - hen egg protein 21 kDa [Source:NCBI gene;Acc:395192]
100. CHTC10 CHTC10 568 0.747 - - - - - - - - 0.747 -

There are 106 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA