Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHD5

Gene Name Gene ID Reads Annotation
CHD5 ENSGALG00000000747 365 chromodomain helicase DNA binding protein 5, transcript variant X17











Genes with expression patterns similar to CHD5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHD5 ENSGALG00000000747 365 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 5, transcript variant X17
2. B3GAT2 ENSGALG00000031590 615 1.534 - - - - - - 0.833 - 0.701 - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
3. IGF2 ENSGALG00000035282 513 1.489 - - - - - - 0.747 - 0.742 - insulin like growth factor 2 [Source:NCBI gene;Acc:395097]
4. GEM ENSGALG00000032506 439 1.481 - - - - - - 0.776 - 0.705 - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
5. PCDH20 ENSGALG00000016934 187 0.93 - - - - 0.930 - - - - - protocadherin 20
6. TMEM200A ENSGALG00000002282 77 0.915 - - - - - - 0.915 - - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
7. ALDH6A1 ENSGALG00000010211 29 0.907 - - - - - - 0.907 - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
8. ENSGALG00000018879 ENSGALG00000018879 9 0.902 - - - - 0.902 - - - - -
9. GPR132 ENSGALG00000027407 9 0.902 - - - - 0.902 - - - - - G protein-coupled receptor 132, transcript variant X2
10. BRD8 ENSGALG00000037646 100 0.902 - - - - 0.902 - - - - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
11. EEA1 ENSGALG00000011280 923 0.902 - - - - - - 0.902 - - - early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
12. CDX2 ENSGALG00000034983 34 0.902 - - - - - - 0.902 - - - caudal type homeobox 2 [Source:NCBI gene;Acc:374205]
13. RAB4A ENSGALG00000036218 20 0.9 - - - - 0.900 - - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
14. CCDC113 20 0.899 - - - - 0.899 - - - - - coiled-coil domain containing 113, transcript variant X2
15. GCNT7 ENSGALG00000007717 11 0.898 - - - - 0.898 - - - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
16. TRERF1 ENSGALG00000009896 42 0.893 - - - - - - 0.893 - - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
17. WFDC2 ENSGALG00000031164 37 0.893 - - - - - - 0.893 - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
18. SRGAP2 ENSGALG00000000816 97 0.891 - - - - - - 0.891 - - - SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
19. ZDHHC8 ENSGALG00000002124 35 0.891 - - - - - - 0.891 - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
20. HINFP ENSGALG00000006806 15 0.891 - - - - - - 0.891 - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
21. ANTXR2 ENSGALG00000043675 52 0.891 - - - - - - 0.891 - - - ANTXR cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:21732]
22. SYNJ2 ENSGALG00000013727 17 0.891 - - - - - - 0.891 - - - synaptojanin 2 [Source:HGNC Symbol;Acc:HGNC:11504]
23. IRF-4 IRF-4 19 0.89 - - - - 0.890 - - - - -
24. GALNT14 ENSGALG00000009078 126 0.888 - - - - - - 0.888 - - - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
25. LRRC72 9 0.886 - - - - 0.886 - - - - - leucine rich repeat containing 72, transcript variant X4
26. ENSGALG00000026142 ENSGALG00000026142 85 0.882 - - - - - - 0.882 - - -
27. ST6GAL2 ENSGALG00000016803 24 0.879 - - - - - - 0.879 - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
28. LOC416530 ENSGALG00000005291 207 0.877 - - - - 0.877 - - - - - uncharacterized LOC416530, transcript variant X1
29. ALOX5AP ENSGALG00000026781 28 0.877 - - - - - - 0.877 - - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
30. ATP2B2 ENSGALG00000030908 584 0.877 - - - - - - 0.877 - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
31. PPM1F ENSGALG00000039121 26 0.873 - - - - - - 0.873 - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
32. PEX7 ENSGALG00000013874 34 0.872 - - - - - - 0.872 - - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
33. IMPG2 ENSGALG00000015322 74 0.869 - - - - - - 0.869 - - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
34. CCDC175 17 0.868 - - - - - - 0.868 - - - coiled-coil domain containing 175
35. ZDHHC22 ENSGALG00000023099 10 0.867 - - - - - - 0.867 - - - zinc finger DHHC-type containing 22 [Source:HGNC Symbol;Acc:HGNC:20106]
36. TGFBRAP1 ENSGALG00000016795 81 0.867 - - - - - - 0.867 - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
37. OSBPL10 45 0.867 - - - - - - 0.867 - - - oxysterol binding protein like 10
38. GALNT11 ENSGALG00000006233 210 0.867 - - - - 0.867 - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
39. KCTD8 ENSGALG00000014225 47 0.867 - - - - - - 0.867 - - - potassium channel tetramerization domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22394]
40. IGF1R ENSGALG00000040651 772 0.865 - - - - - - 0.865 - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
41. BRIP1 ENSGALG00000005279 114 0.863 - - - - - - 0.863 - - - BRCA1 interacting protein C-terminal helicase 1 [Source:NCBI gene;Acc:417642]
42. IFIH1 ENSGALG00000041192 78 0.863 - - - - - - 0.863 - - - interferon induced with helicase C domain 1 [Source:NCBI gene;Acc:424185]
43. KIAA1841 ENSGALG00000007825 22 0.862 - - - - - - 0.862 - - - KIAA1841 [Source:NCBI gene;Acc:421196]
44. STXBP5L ENSGALG00000032361 41 0.859 - - - - 0.859 - - - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
45. PLB1 PLB1 101 0.858 - - - - - - 0.858 - - -
46. RPRD2 ENSGALG00000014656 939 0.858 - - - - - - 0.858 - - - regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
47. SACM1L ENSGALG00000040902 70 0.855 - - - - - - 0.855 - - - SAC1 like phosphatidylinositide phosphatase [Source:HGNC Symbol;Acc:HGNC:17059]
48. KSR1 ENSGALG00000005685 78 0.854 - - - - 0.854 - - - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
49. XPNPEP2 ENSGALG00000025935 57 0.852 - - - - 0.852 - - - - - X-prolyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:12823]
50. PITX1 ENSGALG00000030237 842 0.852 - - - - 0.852 - - - - - paired like homeodomain 1 [Source:NCBI gene;Acc:374201]
51. F10 ENSGALG00000026677 227 0.846 - - - - - - 0.846 - - - coagulation factor X [Source:NCBI gene;Acc:395876]
52. ENSGALG00000027412 ENSGALG00000027412 202 0.844 - - - - - - 0.844 - - -
53. ZDHHC5 ENSGALG00000007362 296 0.842 - - - - 0.842 - - - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
54. CCDC41 CCDC41 160 0.841 - - - - - - 0.841 - - -
55. PIK3R3 ENSGALG00000010335 374 0.841 - - - - 0.841 - - - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
56. PFN2 313 0.839 - - - - - - 0.839 - - - profilin 2, transcript variant X2
57. DRC1 ENSGALG00000016591 174 0.839 - - - - - - 0.839 - - - dynein regulatory complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24245]
58. ARID3A ENSGALG00000026231 867 0.838 - - - - - - 0.838 - - - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
59. TMEM178B ENSGALG00000028444 31 0.835 - - - - - - 0.835 - - - transmembrane protein 178B [Source:NCBI gene;Acc:418120]
60. ELMO3 ENSGALG00000030220 375 0.834 - - - - - - 0.834 - - - engulfment and cell motility 3 [Source:NCBI gene;Acc:100857533]
61. ASIC2 ENSGALG00000000367 72 0.833 - - - - - - 0.833 - - - acid sensing ion channel subunit 2, transcript variant X2
62. LY86 ENSGALG00000012801 865 0.831 - - - - - - 0.831 - - - lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
63. SRRD ENSGALG00000005614 234 0.831 - - - - 0.831 - - - - - SRR1 domain containing [Source:NCBI gene;Acc:416908]
64. TSPAN1 106 0.827 - - - - 0.827 - - - - - tetraspanin 1
65. SUZ12 ENSGALG00000003277 177 0.825 - - - - - - 0.825 - - - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
66. FGL1 ENSGALG00000013606 42 0.823 - - - - - - 0.823 - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
67. BMPR-II BMPR-II 33 0.823 - - - - - - 0.823 - - -
68. CTSZ ENSGALG00000007462 630 0.819 - - - - - - 0.819 - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
69. KLHL17 ENSGALG00000002199 754 0.819 - - - - - - 0.819 - - - kelch like family member 17 [Source:HGNC Symbol;Acc:HGNC:24023]
70. UBE2Z ENSGALG00000001315 103 0.819 - - - - 0.819 - - - - - ubiquitin conjugating enzyme E2 Z [Source:HGNC Symbol;Acc:HGNC:25847]
71. MASP2 ENSGALG00000003016 35 0.818 - - - - 0.818 - - - - - mannan binding lectin serine peptidase 2 [Source:NCBI gene;Acc:407089]
72. LARP6 ENSGALG00000004046 97 0.818 - - - - 0.818 - - - - - La ribonucleoprotein domain family member 6 [Source:HGNC Symbol;Acc:HGNC:24012]
73. ENSGALG00000016441 ENSGALG00000016441 264 0.816 - - - - - - 0.816 - - -
74. LRRC10 ENSGALG00000009976 318 0.815 - - - - 0.815 - - - - - leucine rich repeat containing 10 [Source:HGNC Symbol;Acc:HGNC:20264]
75. NHEJ1 ENSGALG00000011335 334 0.815 - - - - 0.815 - - - - - non-homologous end joining factor 1, transcript variant X3
76. GCLC ENSGALG00000016313 54 0.814 - - - - - - 0.814 - - - glutamate-cysteine ligase catalytic subunit [Source:HGNC Symbol;Acc:HGNC:4311]
77. DUSP21 ENSGALG00000007765 171 0.814 - - - - - - 0.814 - - - dual specificity phosphatase 21 [Source:HGNC Symbol;Acc:HGNC:20476]
78. CCDC6 ENSGALG00000003165 93 0.81 - - - - - - - 0.810 - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
79. RLF ENSGALG00000000862 586 0.81 - - - - - - 0.810 - - - rearranged L-myc fusion [Source:HGNC Symbol;Acc:HGNC:10025]
80. MCOLN3 ENSGALG00000008709 21 0.809 - - - - 0.809 - - - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
81. SLC35D3 ENSGALG00000030545 55 0.807 - - - - 0.807 - - - - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
82. LCMT1 ENSGALG00000005973 1300 0.807 - - - - - - - - 0.807 - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
83. ARHGEF4 ENSGALG00000002193 558 0.806 - - - - - - - - 0.806 - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
84. FASTKD3 ENSGALG00000033521 1186 0.805 - - - - 0.805 - - - - - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
85. WAPAL WAPAL 625 0.805 - - - - - - - - - 0.805
86. GREB1L ENSGALG00000014935 88 0.803 - - - - - - 0.803 - - - GREB1 like retinoic acid receptor coactivator [Source:HGNC Symbol;Acc:HGNC:31042]
87. HOXA3 ENSGALG00000027925 4287 0.8 - - - - - - - - 0.800 - homeobox A3 [Source:HGNC Symbol;Acc:HGNC:5104]
88. ENSGALG00000001483 ENSGALG00000001483 215 0.798 - - - - - - - - 0.798 -
89. HACL1 ENSGALG00000011211 51 0.798 - - - - - - 0.798 - - - 2-hydroxyacyl-CoA lyase 1 [Source:NCBI gene;Acc:420638]
90. MFSD10 ENSGALG00000015652 211 0.795 - - - - - - 0.795 - - - major facilitator superfamily domain containing 10, transcript variant X4
91. CSTA ENSGALG00000014412 422 0.792 - - - - - - 0.792 - - - cystatin A [Source:HGNC Symbol;Acc:HGNC:2481]
92. PPP2CA_1 ENSGALG00000006462 3170 0.788 - - - - - - - - 0.788 - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
93. PACRG ENSGALG00000011560 67 0.786 - - - - - - - - 0.786 - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
94. SDSL ENSGALG00000008317 55 0.785 - - - - 0.785 - - - - - serine dehydratase like [Source:NCBI gene;Acc:417030]
95. DNAJB4 ENSGALG00000008916 68 0.785 - - - - - - 0.785 - - - DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]
96. CRABP2 ENSGALG00000029140 559 0.784 - - - - - - 0.784 - - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
97. PVRL3 PVRL3 231 0.782 - - - - - - 0.782 - - -
98. BATF ENSGALG00000010323 96 0.781 - - - - - - 0.781 - - - basic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]
99. ADCYAP1R1 ENSGALG00000005223 114 0.78 - - - - - - - - 0.780 - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
100. PUS3 ENSGALG00000000962 1209 0.78 - - - - - - 0.780 - - - pseudouridylate synthase 3 [Source:HGNC Symbol;Acc:HGNC:25461]

There are 151 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA