Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CFTR

Gene Name Gene ID Reads Annotation
CFTR ENSGALG00000032986 424 cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]











Genes with expression patterns similar to CFTR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CFTR ENSGALG00000032986 424 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
2. ASTN1 ENSGALG00000004472 855 1.627 - - - - - 0.779 - 0.848 - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
3. TRPC6 ENSGALG00000029416 281 1.566 - - - - 0.837 - 0.729 - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
4. GABRA3 ENSGALG00000007269 985 1.533 - - - - 0.757 0.776 - - - - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
5. CCDC6 ENSGALG00000003165 93 1.525 - - - - 0.773 0.752 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
6. PPP1R1C ENSGALG00000008896 378 1.517 - - - - - 0.757 0.760 - - - protein phosphatase 1 regulatory inhibitor subunit 1C [Source:HGNC Symbol;Acc:HGNC:14940]
7. BMP7 ENSGALG00000007668 6645 1.506 - - - - 0.764 0.742 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
8. ENSGALG00000006865 ENSGALG00000006865 307 1.445 - - - - 0.743 - 0.702 - - -
9. SMPD3 ENSGALG00000034950 4335 1.44 - - - - 0.730 0.710 - - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
10. VRTN ENSGALG00000010232 692 1.439 - - - - 0.716 - 0.723 - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
11. EDIL3 ENSGALG00000015630 7 0.939 - - - - - 0.939 - - - - EGF like repeats and discoidin domains 3 [Source:HGNC Symbol;Acc:HGNC:3173]
12. KANSL1L ENSGALG00000002866 44 0.939 - - - - - 0.939 - - - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
13. SIK2 ENSGALG00000036873 7 0.936 - - - - - - - 0.936 - - salt inducible kinase 2 [Source:HGNC Symbol;Acc:HGNC:21680]
14. MAK ENSGALG00000012770 32 0.929 - - - - - 0.929 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
15. PLCH2 ENSGALG00000001207 7 0.929 - - - - - 0.929 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
16. DSL1 DSL1 113 0.928 - - - - 0.928 - - - - -
17. LEO1 ENSGALG00000004696 111 0.922 - - - - - - - 0.922 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
18. ZBBX ENSGALG00000028207 59 0.921 - - - - - - - 0.921 - - zinc finger B-box domain containing, transcript variant X5
19. ISM1 ENSGALG00000009042 196 0.919 - - - - - 0.919 - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
20. gga-mir-125b gga-mir-125b 146 0.911 - - - - - - - 0.911 - -
21. GHOX-7 GHOX-7 2555 0.908 - - - - - 0.908 - - - -
22. MAPK8 ENSGALG00000006109 51 0.908 - - - - - - - 0.908 - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
23. CCDC28B ENSGALG00000003241 459 0.9 - - - - - - - 0.900 - - coiled-coil domain containing 28B [Source:NCBI gene;Acc:419647]
24. DUS4L ENSGALG00000023661 29 0.898 - - - - - - - 0.898 - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
25. DCBLD1 ENSGALG00000014907 19 0.898 - - - - - - - 0.898 - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
26. IL15RA ENSGALG00000008153 3 0.898 - - - - - - - 0.898 - - interleukin 15 receptor, alpha, transcript variant X2
27. uc uc 37 0.898 - - - - - - - 0.898 - -
28. ZHX1 ENSGALG00000034999 21 0.898 - - - - - - - 0.898 - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
29. EHF ENSGALG00000007817 11 0.898 - - - - - - - 0.898 - - ETS homologous factor [Source:NCBI gene;Acc:425791]
30. AGO2 ENSGALG00000040957 25 0.898 - - - - - - - 0.898 - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
31. FAM167B ENSGALG00000003301 11 0.898 - - - - - - - 0.898 - - family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
32. IL6 ENSGALG00000010915 8 0.898 - - - - - - - 0.898 - - interleukin 6 [Source:NCBI gene;Acc:395337]
33. TTLL7 ENSGALG00000008850 49 0.898 - - - - - - - 0.898 - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
34. LRRC4C ENSGALG00000007948 9 0.89 - - - - - 0.890 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
35. SLC16A4 ENSGALG00000000417 168 0.89 - - - - - - - 0.890 - - solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]
36. ANO3 ENSGALG00000013311 16 0.89 - - - - - - - 0.890 - - anoctamin 3 [Source:NCBI gene;Acc:422968]
37. UBE2O ENSGALG00000001971 77 0.884 - - - - - - - 0.884 - - ubiquitin conjugating enzyme E2 O [Source:HGNC Symbol;Acc:HGNC:29554]
38. ARL16 49 0.883 - - - - - - - 0.883 - - ADP ribosylation factor like GTPase 16, transcript variant X1
39. SFMBT2 ENSGALG00000009279 125 0.882 - - - - - - - 0.882 - - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
40. CCDC71 ENSGALG00000006787 48 0.88 - - - - - - - 0.880 - - coiled-coil domain containing 71 [Source:HGNC Symbol;Acc:HGNC:25760]
41. MYT1L ENSGALG00000016384 147 0.874 - - - - - 0.874 - - - - myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
42. NLGN4 NLGN4 283 0.873 - - - - - 0.873 - - - -
43. HSPH1 ENSGALG00000017077 735 0.873 - - - - 0.873 - - - - - heat shock protein family H (Hsp110) member 1 [Source:NCBI gene;Acc:418917]
44. TRABD2A ENSGALG00000026395 704 0.869 - - - - - 0.869 - - - - TraB domain containing 2A, transcript variant X3
45. TEF ENSGALG00000011958 375 0.868 - - - - 0.868 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
46. DUSP11 DUSP11 765 0.867 - - - - - - - 0.867 - -
47. MSL2 ENSGALG00000039294 55 0.866 - - - - - - - 0.866 - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
48. ARFGEF1 ENSGALG00000034610 238 0.865 - - - - - - - 0.865 - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
49. ENSGALG00000020578 ENSGALG00000020578 25 0.864 - - - - - - - 0.864 - -
50. SNORD2 SNORD2 51 0.864 - - - - - - - 0.864 - -
51. LCA5 ENSGALG00000015878 160 0.859 - - - - - - - 0.859 - - LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
52. PQLC3 ENSGALG00000016449 39 0.857 - - - - - - - 0.857 - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
53. PLK3 ENSGALG00000010129 933 0.856 - - - - - - - 0.856 - - polo like kinase 3 [Source:HGNC Symbol;Acc:HGNC:2154]
54. AMDHD2 ENSGALG00000009234 1730 0.851 - - - - - - 0.851 - - - Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
55. SLC7A11 ENSGALG00000009758 104 0.848 - - - - - 0.848 - - - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
56. MSX2 ENSGALG00000038848 6950 0.844 - - - - - 0.844 - - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
57. WNT4 ENSGALG00000041708 1277 0.842 - - - - - 0.842 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
58. SNCG1 SNCG1 56 0.842 - - - - - - - 0.842 - -
59. R3HCC1 ENSGALG00000036854 1882 0.841 - - - - 0.841 - - - - - R3H domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:27329]
60. CCDC171 ENSGALG00000015103 349 0.84 - - - - - - - 0.840 - - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
61. C17orf75 ENSGALG00000003434 4262 0.837 - - - - - 0.837 - - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
62. DENND5B 4077 0.837 - - - - - 0.837 - - - - DENN domain containing 5B, transcript variant X1
63. ANKRD13C ENSGALG00000031210 2152 0.835 - - - - 0.835 - - - - - ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:HGNC:25374]
64. SLC5A11 ENSGALG00000005933 28 0.834 - - - - - - 0.834 - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
65. LRRC6 ENSGALG00000042548 227 0.833 - - - - 0.833 - - - - - leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
66. CPE ENSGALG00000027788 153 0.831 - - - - - - 0.831 - - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
67. APTX ENSGALG00000001954 692 0.829 - - - - 0.829 - - - - - aprataxin [Source:NCBI gene;Acc:395173]
68. MXRA7 ENSGALG00000001805 945 0.828 - - - - - - - 0.828 - - matrix remodeling associated 7 [Source:HGNC Symbol;Acc:HGNC:7541]
69. NDP ENSGALG00000016222 1067 0.827 - - - - 0.827 - - - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
70. PBLD ENSGALG00000003935 105 0.826 - - - - - - - 0.826 - - phenazine biosynthesis like protein domain containing [Source:NCBI gene;Acc:423685]
71. ELMOD2 ENSGALG00000009836 177 0.822 - - - - - - - 0.822 - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
72. GUCY1A3 718 0.821 - - - - - - 0.821 - - - guanylate cyclase 1 soluble subunit alpha, transcript variant X2
73. DGKE ENSGALG00000003131 17 0.819 - - - - - - - 0.819 - - diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
74. CHGA ENSGALG00000010820 1028 0.817 - - - - - - 0.817 - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
75. NPY ENSGALG00000010983 441 0.815 - - - - - - - 0.815 - - neuropeptide Y [Source:NCBI gene;Acc:396464]
76. PCDH8 ENSGALG00000036258 1945 0.815 - - - - - 0.815 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
77. PARP8 ENSGALG00000032991 17 0.815 - - - - - - - 0.815 - - poly(ADP-ribose) polymerase family member 8 [Source:HGNC Symbol;Acc:HGNC:26124]
78. PDLIM3 ENSGALG00000013414 52 0.814 - - - - - - - 0.814 - - PDZ and LIM domain 3 [Source:NCBI gene;Acc:414873]
79. TRAF3IP2 ENSGALG00000015026 26 0.813 - - - - - - - 0.813 - - TRAF3 interacting protein 2, transcript variant X1
80. HDAC4 ENSGALG00000004288 2124 0.81 - - - - 0.810 - - - - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
81. ENSGALG00000026422 ENSGALG00000026422 34 0.807 - - - - - - - 0.807 - -
82. SPSB3 ENSGALG00000002285 1329 0.807 - - - - 0.807 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
83. CCNC ENSGALG00000015471 6497 0.805 - - - - 0.805 - - - - - cyclin C [Source:NCBI gene;Acc:421791]
84. MPP2 ENSGALG00000035580 383 0.805 - - - - - - 0.805 - - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
85. Sep-03 Sep-03 109 0.804 - - - - - 0.804 - - - -
86. MTHFS ENSGALG00000006516 405 0.804 - - - - - - - 0.804 - - methenyltetrahydrofolate synthetase [Source:NCBI gene;Acc:415484]
87. SHANK2 ENSGALG00000035916 9 0.803 - - - - - 0.803 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
88. SRPX2 ENSGALG00000006796 32 0.803 - - - - - 0.803 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
89. TRAF1 ENSGALG00000001583 3 0.803 - - - - - 0.803 - - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
90. WNT3 ENSGALG00000001079 8 0.803 - - - - - 0.803 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
91. VWA3B ENSGALG00000040709 5 0.803 - - - - - 0.803 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
92. CLDN19 ENSGALG00000023580 1 0.803 - - - - - 0.803 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
93. INHBB ENSGALG00000028770 2 0.803 - - - - - 0.803 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
94. TMEM181 ENSGALG00000013737 19 0.803 - - - - - 0.803 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
95. ACPP ENSGALG00000043415 4 0.803 - - - - - 0.803 - - - - acid phosphatase, prostate, transcript variant X2
96. ENSGALG00000024369 ENSGALG00000024369 4 0.803 - - - - - 0.803 - - - -
97. SMIM10 SMIM10 2 0.803 - - - - - 0.803 - - - -
98. BCMO1 BCMO1 35 0.803 - - - - - 0.803 - - - -
99. TMEM201 ENSGALG00000002527 2 0.803 - - - - - 0.803 - - - - transmembrane protein 201
100. PEX26 ENSGALG00000019286 1 0.803 - - - - - 0.803 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]

There are 255 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA