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Results for CDH20

Gene Name Gene ID Reads Annotation
CDH20 ENSGALG00000012906 2 cadherin 20, type 2 [Source:NCBI gene;Acc:373927]











Genes with expression patterns similar to CDH20

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDH20 ENSGALG00000012906 2 3 - - - - 1.000 1.000 1.000 - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
2. MYNN ENSGALG00000009409 11 2 - - - - - 1.000 1.000 - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
3. STEAP4 ENSGALG00000008997 8 2 - - - - 1.000 - 1.000 - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
4. POPDC2 ENSGALG00000014988 281 1.621 - - - - - 0.867 0.754 - - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
5. ANKDD1A ENSGALG00000007252 1 1 - - - - 1.000 - - - - - ankyrin repeat and death domain containing 1A [Source:NCBI gene;Acc:415525]
6. ENPP7 ENSGALG00000013743 6 1 - - - - 1.000 - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 7 [Source:HGNC Symbol;Acc:HGNC:23764]
7. SULT1B ENSGALG00000023122 7 1 - - - - - - 1.000 - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
8. RHPN1 ENSGALG00000034337 3 1 - - - - - 1.000 - - - - rhophilin Rho GTPase binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19973]
9. LRCH3 ENSGALG00000007595 21 1 - - - - 1.000 - - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
10. FAM83H ENSGALG00000033118 50 1 - - - - - - 1.000 - - - family with sequence similarity 83 member H [Source:HGNC Symbol;Acc:HGNC:24797]
11. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - 1.000 - - -
12. C9orf171 C9orf171 35 1 - - - - - 1.000 - - - -
13. PLCZ1 ENSGALG00000013123 3 1 - - - - - - 1.000 - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
14. FBXO11 ENSGALG00000008944 95 1 - - - - 1.000 - - - - - F-box protein 11 [Source:HGNC Symbol;Acc:HGNC:13590]
15. RGS13 ENSGALG00000026810 8 1 - - - - - - 1.000 - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
16. FOXE3 11 1 - - - - 1.000 - - - - - forkhead box E3
17. CLCNKB ENSGALG00000003713 27 1 - - - - - - 1.000 - - - chloride voltage-gated channel Kb, transcript variant X3
18. GIF ENSGALG00000031546 2 1 - - - - - 1.000 - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
19. SNCB ENSGALG00000021542 19 1 - - - - - - 1.000 - - - synuclein beta [Source:NCBI gene;Acc:395391]
20. IDNK ENSGALG00000012583 3 1 - - - - 1.000 - - - - - IDNK, gluconokinase [Source:HGNC Symbol;Acc:HGNC:31367]
21. KIAA1755 3 1 - - - - 1.000 - - - - - KIAA1755 ortholog, transcript variant X2
22. GABARAPL3 GABARAPL3 32 1 - - - - - - 1.000 - - -
23. TPPP3 ENSGALG00000002103 1 1 - - - - - 1.000 - - - - tubulin polymerization promoting protein family member 3 [Source:HGNC Symbol;Acc:HGNC:24162]
24. ENSGALG00000028016 ENSGALG00000028016 4 1 - - - - 1.000 - - - - -
25. PSCA ENSGALG00000045875 5 1 - - - - - 1.000 - - - - prostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]
26. CST7 ENSGALG00000008660 1 1 - - - - 1.000 - - - - - cystatin F [Source:NCBI gene;Acc:416716]
27. ATXN10 ENSGALG00000014234 16 1 - - - - 1.000 - - - - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
28. CELSR1 ENSGALG00000043355 19 1 - - - - 1.000 - - - - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
29. NME4 ENSGALG00000002688 1 1 - - - - 1.000 - - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
30. CSF2RA ENSGALG00000016693 5 1 - - - - 1.000 - - - - - colony stimulating factor 2 receptor alpha subunit [Source:NCBI gene;Acc:418666]
31. SEMA4D ENSGALG00000010697 10 1 - - - - - - 1.000 - - - semaphorin 4D [Source:NCBI gene;Acc:396331]
32. ENSGALG00000026418 ENSGALG00000026418 2 1 - - - - - - 1.000 - - -
33. GLT8D2 ENSGALG00000034078 11 1 - - - - 1.000 - - - - - glycosyltransferase 8 domain containing 2 [Source:NCBI gene;Acc:418085]
34. BCL2 ENSGALG00000012885 45 1 - - - - 1.000 - - - - - BCL2, apoptosis regulator [Source:NCBI gene;Acc:396282]
35. MC5R ENSGALG00000032087 2 1 - - - - 1.000 - - - - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
36. STRADB ENSGALG00000008373 10 1 - - - - - - 1.000 - - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
37. PCDHA11 58 1 - - - - - - 1.000 - - - protocadherin alpha 11
38. DMB1 ENSGALG00000000162 7 1 - - - - - - 1.000 - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
39. ENSGALG00000027815 ENSGALG00000027815 15 1 - - - - - 1.000 - - - -
40. PTPRD ENSGALG00000015058 37 1 - - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
41. IPP ENSGALG00000010287 2 1 - - - - - 1.000 - - - - intracisternal A particle-promoted polypeptide [Source:HGNC Symbol;Acc:HGNC:6108]
42. CNTNAP1 ENSGALG00000003123 1 1 - - - - 1.000 - - - - - contactin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:8011]
43. PAPPA ENSGALG00000007079 6 1 - - - - - - 1.000 - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
44. HOXB13 ENSGALG00000033154 71 1 - - - - - - 1.000 - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
45. DSG2 ENSGALG00000015142 67 1 - - - - - - 1.000 - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
46. TUSC5 15 1 - - - - - - 1.000 - - - tumor suppressor candidate 5
47. SLC6A11 ENSGALG00000004879 16 1 - - - - - 1.000 - - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
48. ENSGALG00000028571 ENSGALG00000028571 1 1 - - - - - 1.000 - - - -
49. ERN1 ENSGALG00000003476 4 1 - - - - - 1.000 - - - - endoplasmic reticulum to nucleus signaling 1 [Source:NCBI gene;Acc:417414]
50. ENSGALG00000025714 ENSGALG00000025714 6 1 - - - - - 1.000 - - - -
51. CNKSR3 ENSGALG00000027159 41 1 - - - - - - 1.000 - - - CNKSR family member 3, transcript variant X2
52. GRHL3 ENSGALG00000004249 1 1 - - - - - - 1.000 - - - grainyhead like transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:25839]
53. CD1A1 CD1A1 12 1 - - - - 1.000 - - - - -
54. GPR34 ENSGALG00000016227 9 1 - - - - 1.000 - - - - - G protein-coupled receptor 34 [Source:NCBI gene;Acc:771199]
55. KIAA1377 KIAA1377 48 1 - - - - - - 1.000 - - -
56. PI15 ENSGALG00000029264 21 1 - - - - - - 1.000 - - - peptidase inhibitor 15 [Source:NCBI gene;Acc:374241]
57. LAMB4 ENSGALG00000007917 54 1 - - - - 1.000 - - - - - laminin subunit beta 4 [Source:NCBI gene;Acc:396076]
58. uc_6 uc_6 14 1 - - - - - - 1.000 - - -
59. LRP3 ENSGALG00000004853 13 1 - - - - - 1.000 - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
60. GYS2 ENSGALG00000013265 14 1 - - - - 1.000 - - - - - glycogen synthase 2 [Source:HGNC Symbol;Acc:HGNC:4707]
61. ENSGALG00000019221 ENSGALG00000019221 9 1 - - - - - 1.000 - - - -
62. BROX ENSGALG00000009413 15 1 - - - - - - 1.000 - - - BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
63. MYO18B ENSGALG00000045218 7 1 - - - - - 1.000 - - - - myosin XVIIIB [Source:HGNC Symbol;Acc:HGNC:18150]
64. SLC44A1 ENSGALG00000015439 32 1 - - - - - - 1.000 - - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
65. ENSGALG00000028322 ENSGALG00000028322 19 1 - - - - - 1.000 - - - -
66. SNORD61 SNORD61 12 1 - - - - 1.000 - - - - -
67. PTCHD3 ENSGALG00000023347 5 1 - - - - 1.000 - - - - - patched domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24776]
68. LOC422320 ENSGALG00000007703 6 1 - - - - - - 1.000 - - - ligand of Numb protein X 2-like, transcript variant X1
69. KLF15 ENSGALG00000036133 3 1 - - - - 1.000 - - - - - Kruppel like factor 15 [Source:HGNC Symbol;Acc:HGNC:14536]
70. DRG11 DRG11 32 1 - - - - - - 1.000 - - -
71. LMO3 ENSGALG00000036358 1 1 - - - - - 1.000 - - - - LIM domain only 3 [Source:HGNC Symbol;Acc:HGNC:6643]
72. CDXB CDXB 143 1 - - - - - 1.000 - - - -
73. GLRA2 ENSGALG00000016571 10 1 - - - - 1.000 - - - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
74. MAP2K1 ENSGALG00000007687 250 1 - - - - - - 1.000 - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
75. MIER3 ENSGALG00000014721 57 1 - - - - - - 1.000 - - - MIER family member 3, transcript variant X6
76. C2CD3 ENSGALG00000017314 13 1 - - - - - - 1.000 - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
77. PIK3R4 ENSGALG00000040917 10 1 - - - - - - 1.000 - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
78. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 1 - - - - - - 1.000 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
79. BPIFC BPIFC 1 1 - - - - - 1.000 - - - -
80. GFI1 ENSGALG00000043650 2 1 - - - - 1.000 - - - - - growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]
81. MLH1 ENSGALG00000039169 19 1 - - - - - 1.000 - - - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
82. GZF1_1 ENSGALG00000008350 92 0.999 - - - - - 0.999 - - - - GDNF inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:15808]
83. SPOCK2 9 0.997 - - - - - 0.997 - - - - SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2, transcript variant X2
84. ST3GAL4 ENSGALG00000029747 184 0.986 - - - - - 0.986 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:10864]
85. ASXL1 ENSGALG00000006612 273 0.978 - - - - - 0.978 - - - - ASXL transcriptional regulator 1 [Source:HGNC Symbol;Acc:HGNC:18318]
86. TMEM52B ENSGALG00000034698 169 0.96 - - - - - 0.960 - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
87. LOC769139 ENSGALG00000026754 753 0.959 - - - - - 0.959 - - - - feather keratin 1-like, transcript variant X2
88. PARD6A ENSGALG00000001214 9 0.955 - - - - - 0.955 - - - - par-6 family cell polarity regulator alpha [Source:HGNC Symbol;Acc:HGNC:15943]
89. GAREML GAREML 8 0.955 - - - - - 0.955 - - - -
90. SOX2 ENSGALG00000043460 6 0.954 - - - - - 0.954 - - - - SRY-box 2 [Source:NCBI gene;Acc:396105]
91. ENSGALG00000007420 ENSGALG00000007420 7 0.947 - - - - - 0.947 - - - -
92. FAR1 ENSGALG00000005353 12 0.947 - - - - - 0.947 - - - - fatty acyl-CoA reductase 1 [Source:NCBI gene;Acc:423028]
93. BRINP2 ENSGALG00000004448 26 0.928 - - - - - 0.928 - - - - BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
94. CARD8 ENSGALG00000007698 45 0.926 - - - - - 0.926 - - - - caspase recruitment domain family, member 8
95. UBXN6 ENSGALG00000001146 122 0.917 - - - - - 0.917 - - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
96. FBXO18 35 0.908 - - - - - 0.908 - - - - F-box protein, helicase, 18, transcript variant X4
97. GABPB2 ENSGALG00000026734 7 0.905 - - - - - 0.905 - - - - GA binding protein transcription factor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:28441]
98. ABCB5 ENSGALG00000010901 60 0.904 - - - - - 0.904 - - - - ATP binding cassette subfamily B member 5, transcript variant X1
99. IRX5 ENSGALG00000003588 79 0.898 - - - - - 0.898 - - - - iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
100. DOK6 ENSGALG00000013753 2 0.888 - - - - - 0.888 - - - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]

There are 83 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA