Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDC42BPA

Gene Name Gene ID Reads Annotation
CDC42BPA ENSGALG00000009158 3926 CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]











Genes with expression patterns similar to CDC42BPA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDC42BPA ENSGALG00000009158 3926 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
2. RNPS1 ENSGALG00000009288 13588 2.13 - - 0.712 - - - 0.716 0.702 - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
3. PKP4 ENSGALG00000012561 3087 1.765 - - 0.902 - - - - 0.863 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
4. AMMECR1L ENSGALG00000026728 2134 1.716 - - 0.848 - - - - 0.868 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
5. CCDC61 ENSGALG00000006714 8066 1.692 - - 0.813 - - - - 0.879 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
6. ARFRP1 ENSGALG00000006101 3743 1.688 - - 0.783 - - - - 0.905 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
7. MBD3 ENSGALG00000001101 37265 1.659 - - - - - - 0.774 0.885 - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
8. UBE2D1 ENSGALG00000021213 5876 1.648 - - - - - - 0.707 0.941 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
9. ATG4C ENSGALG00000010985 6102 1.647 - - - - - - 0.753 0.894 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
10. CHMP6 ENSGALG00000026428 18026 1.641 - - - - - - 0.737 0.904 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
11. TMEM200C ENSGALG00000030210 1434 1.614 - - 0.909 - - - 0.705 - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
12. TBL1XR1 ENSGALG00000039182 16983 1.613 - - - - - - 0.735 0.878 - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
13. CPT1A ENSGALG00000007077 3199 1.597 - - 0.886 - - - 0.711 - - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
14. RUVBL1 ENSGALG00000005931 9379 1.594 - - - - - - 0.766 0.828 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
15. CTSC ENSGALG00000017239 7651 1.593 - - - - - - 0.726 0.867 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
16. PAPSS1 ENSGALG00000010542 5631 1.577 - - 0.829 - - - 0.748 - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
17. PALLD ENSGALG00000009650 10803 1.523 - - 0.734 - - - - 0.789 - - palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]
18. WDR61 ENSGALG00000003221 11352 1.442 - - 0.737 - - - 0.705 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
19. NOVA1 ENSGALG00000009850 7584 1.415 - - 0.706 - - - 0.709 - - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
20. MED24 ENSGALG00000013506 5403 0.957 - - - - - - - 0.957 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
21. CHMP3 ENSGALG00000015805 11581 0.95 - - - - - - - 0.950 - - charged multivesicular body protein 3
22. SLC35E3 ENSGALG00000009940 8560 0.944 - - - - - - - 0.944 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
23. TSC22D2 ENSGALG00000027591 6594 0.937 - - - - - - - 0.937 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
24. LATS2 4776 0.935 - - - - - - - 0.935 - - large tumor suppressor kinase 2
25. CPQ ENSGALG00000030866 3962 0.934 - - - - - - - 0.934 - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
26. NLGN1 ENSGALG00000040938 651 0.927 - - 0.927 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
27. MTERFD1 MTERFD1 3640 0.925 - - - - - - - 0.925 - -
28. PGAM5 ENSGALG00000002137 7700 0.924 - - - - - - - 0.924 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
29. MARC1 ENSGALG00000009453 5675 0.923 - - - - - - - 0.923 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
30. C-MET C-MET 1650 0.923 - - 0.923 - - - - - - -
31. SCO1 ENSGALG00000030475 7304 0.923 - - - - - - - 0.923 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
32. NDUFB3 ENSGALG00000008239 15511 0.922 - - - - - - - 0.922 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
33. BID ENSGALG00000013039 12427 0.92 - - - - - - - 0.920 - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
34. MRPS23 ENSGALG00000005559 10360 0.918 - - - - - - - 0.918 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
35. GFPT1 ENSGALG00000036391 14025 0.918 - - - - - - - 0.918 - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
36. PVALB1 PVALB1 267 0.918 - - 0.918 - - - - - - -
37. CAMSAP2 ENSGALG00000002145 6109 0.918 - - - - - - - 0.918 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
38. MLLT10 ENSGALG00000007928 4022 0.917 - - - - - - - 0.917 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
39. TRIM24 ENSGALG00000012823 2725 0.916 - - - - - - - 0.916 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
40. ENSGALG00000003150 ENSGALG00000003150 10001 0.914 - - - - - - - 0.914 - -
41. TSEN2 ENSGALG00000004981 1929 0.913 - - 0.913 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
42. CKAP2 ENSGALG00000017025 25020 0.913 - - - - - - - 0.913 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
43. RNF214 ENSGALG00000036993 3729 0.912 - - - - - - - 0.912 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
44. LIG3 ENSGALG00000002288 7198 0.911 - - - - - - - 0.911 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
45. GBGT1 ENSGALG00000003340 399 0.911 - - 0.911 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
46. ADAMTS2 ENSGALG00000032974 141 0.91 - - 0.910 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
47. ATP2B2 ENSGALG00000030908 584 0.908 - - 0.908 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
48. ACOT9 ENSGALG00000016351 330 0.908 - - 0.908 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
49. PDCD4 ENSGALG00000008700 574 0.907 - - 0.907 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
50. ENSGALG00000023180 ENSGALG00000023180 83 0.907 - - 0.907 - - - - - - -
51. GOLGA2 ENSGALG00000004881 677 0.906 - - 0.906 - - - - - - - golgin A2, transcript variant X7
52. GRIK3 ENSGALG00000002098 111 0.905 - - 0.905 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
53. PPCS ENSGALG00000004882 5759 0.905 - - - - - - - 0.905 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
54. KIAA0195 KIAA0195 48 0.905 - - 0.905 - - - - - - -
55. RHOC ENSGALG00000001569 53 0.904 - - 0.904 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
56. PLEKHG5 ENSGALG00000027476 42 0.903 - - 0.903 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
57. ZNF423 ENSGALG00000003891 103 0.903 - - 0.903 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
58. HPCAL1 ENSGALG00000016443 6633 0.903 - - - - - - - 0.903 - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
59. POMC ENSGALG00000016600 99 0.903 - - 0.903 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
60. RPUSD1 ENSGALG00000005315 651 0.903 - - 0.903 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
61. VGLL4 ENSGALG00000004937 3762 0.903 - - - - - - - 0.903 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
62. SNAP29 ENSGALG00000040128 3581 0.903 - - - - - - - 0.903 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
63. MGMT ENSGALG00000042949 53 0.902 - - 0.902 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
64. MT1 MT1 218 0.902 - - 0.902 - - - - - - -
65. CXorf30 CXorf30 172 0.902 - - 0.902 - - - - - - -
66. SULT2B1L1 ENSGALG00000023472 569 0.901 - - 0.901 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
67. NCAPD3 ENSGALG00000001491 221 0.901 - - 0.901 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
68. LZIC ENSGALG00000002616 9052 0.901 - - 0.901 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
69. MRPL18 ENSGALG00000011625 7855 0.9 - - - - - - - 0.900 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
70. CHAF1A ENSGALG00000001126 6506 0.9 - - - - - - - 0.900 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
71. RDM1 ENSGALG00000000243 3388 0.9 - - - - - - - 0.900 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
72. BAG3 ENSGALG00000009433 6152 0.899 - - - - - - - 0.899 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
73. WBSCR17 581 0.899 - - 0.899 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
74. AP3M1 ENSGALG00000005070 712 0.899 - - 0.899 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
75. MAST2 ENSGALG00000010313 2975 0.898 - - - - - - - 0.898 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
76. SORCS1 ENSGALG00000008465 468 0.898 - - 0.898 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
77. TMEM59 ENSGALG00000010746 4669 0.898 - - - - - - - 0.898 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
78. KDM4A ENSGALG00000010074 7219 0.898 - - - - - - - 0.898 - - lysine demethylase 4A
79. PEO1 PEO1 6747 0.898 - - - - - - - 0.898 - -
80. NDUFB8 ENSGALG00000005704 5781 0.897 - - - - - - - 0.897 - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
81. GLG1 ENSGALG00000039818 6221 0.897 - - - - - - - 0.897 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
82. BCLAF1 ENSGALG00000013935 7596 0.897 - - - - - - - 0.897 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
83. PTPN5 ENSGALG00000006368 440 0.896 - - 0.896 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:HGNC Symbol;Acc:HGNC:9657]
84. LGALS3 ENSGALG00000012173 3306 0.896 - - 0.896 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
85. FBXO33 ENSGALG00000010192 2917 0.896 - - - - - - - 0.896 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
86. PIGK ENSGALG00000009015 7942 0.896 - - - - - - - 0.896 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
87. SMIM12 ENSGALG00000030261 5860 0.895 - - - - - - - 0.895 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
88. ERGIC2 ENSGALG00000007183 12870 0.895 - - - - - - - 0.895 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
89. DMB2 ENSGALG00000038393 1257 0.895 - - - - - - - 0.895 - - major histocompatibility complex, class II, DM beta 2 [Source:NCBI gene;Acc:417051]
90. EFHD1 ENSGALG00000001428 2831 0.895 - - - - - - - 0.895 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
91. OSGEPL1 ENSGALG00000037727 1879 0.894 - - 0.894 - - - - - - - O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
92. PELI1 ENSGALG00000008837 11561 0.894 - - 0.894 - - - - - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
93. TXNDC5 ENSGALG00000012784 4678 0.893 - - - - - - - 0.893 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
94. FXR1 ENSGALG00000008864 10250 0.892 - - - - - - - 0.892 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
95. CCDC25 ENSGALG00000016586 351 0.892 - - 0.892 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
96. ZEB2 ENSGALG00000040465 315 0.892 - - 0.892 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
97. LYPD6B ENSGALG00000028759 831 0.892 - - 0.892 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
98. CEP170 ENSGALG00000010733 4177 0.892 - - - - - - - 0.892 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
99. ENSGALG00000014190 ENSGALG00000014190 5735 0.891 - - - - - - - 0.891 - -
100. KCNB1 ENSGALG00000004758 620 0.891 - - - - - - - 0.891 - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]

There are 606 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA