Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CD40

Gene Name Gene ID Reads Annotation
CD40 ENSGALG00000007015 7 CD40 molecule [Source:NCBI gene;Acc:395385]











Genes with expression patterns similar to CD40

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CD40 ENSGALG00000007015 7 4 - - 1.000 - 1.000 - - 1.000 - 1.000 CD40 molecule [Source:NCBI gene;Acc:395385]
2. gga-mir-6569 ENSGALG00000026551 10 2 - - - - 1.000 - - 1.000 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
3. CLDN15 ENSGALG00000038964 21 2 - - - - - - - 1.000 - 1.000 claudin 15, transcript variant X4
4. TMEM72 ENSGALG00000026808 5 1.913 - - - - - - - 1.000 - 0.913 transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
5. ENSGALG00000018621 ENSGALG00000018621 8 1.789 - - - - 0.789 - - 1.000 - -
6. IL18R1 ENSGALG00000040621 12 1.758 - - - - - - - 1.000 - 0.758 interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
7. CREB3L1 ENSGALG00000008393 3 1.71 - - 0.710 - - - - 1.000 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
8. UHRF1BP1L ENSGALG00000011557 17 1.71 - - 0.710 - - - - 1.000 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
9. IQSEC3 ENSGALG00000012975 4 1.71 - - 0.710 - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
10. LICOS LICOS 13 1.71 - - 0.710 - - - - 1.000 - -
11. RBM15 ENSGALG00000000401 22 1 - - - - - - - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
12. ADCY1 ENSGALG00000031170 4 1 - - - - - - - 1.000 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
13. ALG12 ENSGALG00000008539 20 1 - - - - - - - 1.000 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
14. ADCY7 ENSGALG00000003837 10 1 - - - - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
15. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - - 1.000 - -
16. RMST RMST 2 1 - - - - - - - 1.000 - -
17. ANKRD31 46 1 - - - - - - - 1.000 - - ankyrin repeat domain 31, transcript variant X2
18. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
19. KNDC1 ENSGALG00000007007 31 1 - - - - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
20. MMP11 ENSGALG00000005968 3 1 - - - - - - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
21. VIT ENSGALG00000010583 16 1 - - - - - - - 1.000 - - vitrin [Source:NCBI gene;Acc:421471]
22. PTPRO ENSGALG00000013085 26 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
23. ANKS1A ENSGALG00000002723 3 1 - - - - 1.000 - - - - - ankyrin repeat and sterile alpha motif domain containing 1A [Source:HGNC Symbol;Acc:HGNC:20961]
24. PPIL6 ENSGALG00000015237 11 1 - - - - - - - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
25. PBEF1 PBEF1 25 1 - - - - - - - 1.000 - -
26. ID3 ENSGALG00000035317 52 1 - - - - - - - 1.000 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
27. OSBPL3 ENSGALG00000011007 23 1 - - - - - - - 1.000 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
28. TMC3 ENSGALG00000006376 12 1 - - - - - - - - - 1.000 transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
29. OTX2 ENSGALG00000034889 8 1 - - - - - - - 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
30. ROS1 ENSGALG00000014913 7 1 - - - - - - - 1.000 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
31. KLHL40 ENSGALG00000005292 61 1 - - - - - - - 1.000 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
32. DDO ENSGALG00000015057 25 1 - - - - - - - - - 1.000 D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
33. KIAA0319L ENSGALG00000002445 75 1 - - - - - - - 1.000 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
34. MICALL2 ENSGALG00000004070 23 1 - - - - - - - 1.000 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
35. SPG20 22 1 - - - - - - - 1.000 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
36. VTG1 ENSGALG00000039354 17 1 - - - - - - - - - 1.000 vitellogenin 1 [Source:NCBI gene;Acc:424547]
37. SKI ENSGALG00000001229 50 1 - - - - - - - 1.000 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
38. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
39. CBR4 ENSGALG00000009714 7 1 - - - - - - - 1.000 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
40. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
41. PPP1R1B ENSGALG00000044406 6 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
42. gga-mir-218-1 ENSGALG00000018327 3 1 - - - - - - - 1.000 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
43. C18H17ORF67 ENSGALG00000024428 10 1 - - - - - - - - - 1.000 chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
44. FHDC1 ENSGALG00000041054 34 1 - - - - - - - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
45. ENSGALG00000028964 ENSGALG00000028964 46 1 - - - - - - - 1.000 - -
46. CREB3 ENSGALG00000002523 23 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
47. SNORD61 SNORD61 12 1 - - - - - - - - - 1.000
48. AOC1 13 1 - - - - - - - 1.000 - - amine oxidase, copper containing 1, transcript variant X2
49. SLC6A6 ENSGALG00000006425 31 1 - - - - - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
50. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - 1.000 - -
51. B2M ENSGALG00000002160 4 1 - - - - - - - 1.000 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
52. TMSB10 TMSB10 518 1 - - - - - - - 1.000 - -
53. PYROXD2 ENSGALG00000007014 14 1 - - - - - - - 1.000 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
54. DENND5A ENSGALG00000005840 54 1 - - - - - - - 1.000 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
55. PPP1R36 ENSGALG00000040026 24 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
56. FOXG1 ENSGALG00000036364 29 1 - - - - - - - 1.000 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
57. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - - - 1.000 - -
58. SCN4B ENSGALG00000007409 22 1 - - - - - - - 1.000 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
59. CBX2 ENSGALG00000023338 10 1 - - - - - - - 1.000 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
60. RBMS3 ENSGALG00000011439 25 1 - - - - - - - 1.000 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
61. PEX5 ENSGALG00000014683 17 1 - - - - - - - 1.000 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
62. FLT4 ENSGALG00000005802 5 1 - - - - - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
63. DMGDH ENSGALG00000004491 15 1 - - - - - - - 1.000 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
64. NMNAT3 ENSGALG00000026187 11 1 - - - - - - - 1.000 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
65. PHC2 62 1 - - - - - - - 1.000 - - polyhomeotic homolog 2
66. RAP2A ENSGALG00000016889 26 1 - - - - - - - - - 1.000 RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
67. SUSD5 ENSGALG00000042289 1 1 - - - - - - - 1.000 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
68. ISM2 ENSGALG00000010468 1 1 - - - - - - - - - 1.000 isthmin 2, transcript variant X2
69. TANC2 26 1 - - - - - - - 1.000 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
70. SLC6A20 ENSGALG00000039333 1 1 - - - - - - - 1.000 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
71. SPINK6 ENSGALG00000032567 3 1 - - - - - - - 1.000 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
72. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
73. IL8 ENSGALG00000026098 16 1 - - - - - - - 1.000 - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
74. SNORA26 SNORA26 3 1 - - - - - - - 1.000 - -
75. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
76. AXDND1 ENSGALG00000004173 3 1 - - - - 1.000 - - - - - axonemal dynein light chain domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26564]
77. ZNF131 ENSGALG00000033435 56 1 - - - - 1.000 - - - - - zinc finger protein 131, transcript variant X1
78. ATXN10 ENSGALG00000014234 16 1 - - - - - - - 1.000 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
79. RAI1 ENSGALG00000004888 14 1 - - - - - - - 1.000 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
80. RBKS ENSGALG00000010043 3 1 - - - - - - - 1.000 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
81. ZFYVE28 15 1 - - - - - - - 1.000 - - zinc finger FYVE-type containing 28, transcript variant X3
82. BTBD10 ENSGALG00000005369 56 1 - - - - - - - 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
83. UPK3A ENSGALG00000014227 7 1 - - - - - - - - - 1.000 uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
84. HLCS ENSGALG00000016047 30 1 - - - - - - - 1.000 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
85. TNMD ENSGALG00000006821 19 1 - - - - - - - 1.000 - - tenomodulin [Source:NCBI gene;Acc:404530]
86. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - - 1.000 - -
87. CFTII CFTII 6 1 - - - - - - - 1.000 - -
88. SLC39A12 ENSGALG00000008602 6 1 - - - - - - - 1.000 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
89. NME8 ENSGALG00000029677 2 1 - - - - - - - 1.000 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
90. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
91. ENPP3 ENSGALG00000037587 25 1 - - - - - - - - - 1.000 ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
92. POMGNT1 ENSGALG00000010351 3 1 - - - - 1.000 - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
93. ADAMTS8 ENSGALG00000001370 0 1 - - - - - - - 1.000 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
94. NSUN6 ENSGALG00000008564 9 1 - - - - 1.000 - - - - - NOP2/Sun RNA methyltransferase family member 6 [Source:HGNC Symbol;Acc:HGNC:23529]
95. TERF2IP ENSGALG00000000903 41 1 - - - - - - - 1.000 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
96. ENSGALG00000029127 ENSGALG00000029127 2 1 - - - - - - - 1.000 - -
97. ACKR2 ENSGALG00000005305 0 1 - - - - - - - 1.000 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
98. C1H7ORF60 C1H7ORF60 3 1 - - - - - - - 1.000 - -
99. LRCH1 ENSGALG00000016990 17 1 - - - - - - - 1.000 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
100. KCNK16 ENSGALG00000020049 0 1 - - - - - - - 1.000 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]

There are 259 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA