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Results for CCDC109B

Gene Name Gene ID Reads Annotation
CCDC109B CCDC109B 3222











Genes with expression patterns similar to CCDC109B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCDC109B CCDC109B 3222 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CEP112 ENSGALG00000034989 123 1.492 - - - - - - 0.747 - 0.745 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
3. MSMO1 ENSGALG00000009560 6928 1.466 - - - - - - 0.719 0.747 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
4. OSBPL5 ENSGALG00000006401 3555 1.46 - - - - - - 0.736 0.724 - - oxysterol binding protein like 5 [Source:HGNC Symbol;Acc:HGNC:16392]
5. SIPA1L1 ENSGALG00000009381 4019 1.454 - - - - - - 0.700 0.754 - - signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
6. COX17 ENSGALG00000014981 5646 1.432 - - - - - - - 0.700 0.732 - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
7. LRP12 ENSGALG00000033630 2534 0.862 - - - - - - - - 0.862 - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
8. LRRC71 ENSGALG00000027351 695 0.848 - - - - - - - - 0.848 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
9. RUFY2 1442 0.831 - - - - - - - - 0.831 - RUN and FYVE domain containing 2, transcript variant X1
10. CHUK ENSGALG00000003289 5698 0.83 - - - - - - 0.830 - - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
11. RAB8A ENSGALG00000028851 1416 0.826 - - - - - - - - 0.826 - RAB8A, member RAS oncogene family [Source:NCBI gene;Acc:428352]
12. PGS1 ENSGALG00000007181 3187 0.826 - - - - - - - - 0.826 - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
13. TULP4 ENSGALG00000037377 563 0.824 - - - - - - - - 0.824 - tubby like protein 4 [Source:HGNC Symbol;Acc:HGNC:15530]
14. CHAMP1 ENSGALG00000016813 508 0.815 - - - - - - - - 0.815 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
15. ACOX1 ENSGALG00000002159 2953 0.814 - - - - - - 0.814 - - - acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
16. HAGH ENSGALG00000005398 168 0.811 - - - - - - - - 0.811 - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
17. TSEN2 ENSGALG00000004981 1929 0.81 - - - - - - - - 0.810 - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
18. MADD ENSGALG00000008181 2273 0.809 - - - - - - 0.809 - - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
19. TULP3 ENSGALG00000013424 2064 0.807 - - - - - - 0.807 - - - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
20. GRAMD1C ENSGALG00000035629 2494 0.805 - - - - - - 0.805 - - - GRAM domain containing 1C [Source:HGNC Symbol;Acc:HGNC:25252]
21. TLN1 ENSGALG00000002548 489 0.804 - - - - - - - - 0.804 - talin 1 [Source:NCBI gene;Acc:395194]
22. DTX3L ENSGALG00000012075 399 0.803 - - - - - - - - 0.803 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
23. SERINC2 ENSGALG00000021685 1581 0.802 - - - - - - - - 0.802 - serine incorporator 2 [Source:NCBI gene;Acc:419558]
24. BEND3 ENSGALG00000015314 2162 0.801 - - - - - - 0.801 - - - BEN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23040]
25. VWF ENSGALG00000017272 1012 0.801 - - - - - - - - 0.801 - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
26. RBM7 ENSGALG00000007017 8779 0.8 - - - - - - - - 0.800 - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
27. GLIPR2 ENSGALG00000028821 5791 0.798 - - - - - - - 0.798 - - GLI pathogenesis related 2, transcript variant X2
28. SLTM ENSGALG00000004192 3244 0.797 - - - - - - - - 0.797 - SAFB like transcription modulator [Source:HGNC Symbol;Acc:HGNC:20709]
29. CHD2 ENSGALG00000006949 1076 0.796 - - - - - - - - 0.796 - chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
30. RAD52 ENSGALG00000039171 6989 0.796 - - - - - - 0.796 - - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
31. KLHL13 KLHL13 2712 0.796 - - - - - - - - 0.796 -
32. ZNF706 ENSGALG00000041200 844 0.795 - - - - - - - - 0.795 - zinc finger protein 706 [Source:NCBI gene;Acc:768824]
33. BRCC3 ENSGALG00000005383 4844 0.793 - - - - - - - - 0.793 - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
34. ANAPC10 ENSGALG00000028643 1376 0.793 - - - - - - 0.793 - - - anaphase promoting complex subunit 10 [Source:NCBI gene;Acc:422461]
35. ATP6V0E2 ENSGALG00000020754 2648 0.792 - - - - - - 0.792 - - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
36. RIT1 ENSGALG00000014647 7174 0.792 - - - - - - - - 0.792 - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
37. CTDP1 ENSGALG00000031461 4818 0.791 - - - - - - - - 0.791 - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
38. DBI ENSGALG00000012112 6910 0.79 - - - - - - 0.790 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
39. XPOT ENSGALG00000009835 2953 0.789 - - - - - - - - 0.789 - exportin for tRNA [Source:NCBI gene;Acc:417824]
40. SNRNP25 ENSGALG00000026559 2097 0.789 - - - - - - 0.789 - - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
41. USP45 ENSGALG00000015478 3101 0.787 - - - - - - 0.787 - - - ubiquitin specific peptidase 45 [Source:NCBI gene;Acc:421793]
42. RABEPK ENSGALG00000042210 4492 0.787 - - - - - - - 0.787 - - Rab9 effector protein with kelch motifs [Source:NCBI gene;Acc:772357]
43. FAM57A ENSGALG00000004820 1492 0.786 - - - - - - - - 0.786 - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
44. FRA10AC1 ENSGALG00000006622 286 0.784 - - - - - - - - 0.784 - FRA10A associated CGG repeat 1 [Source:HGNC Symbol;Acc:HGNC:1162]
45. APMAP ENSGALG00000008651 2167 0.783 - - - - - - - - 0.783 - adipocyte plasma membrane associated protein [Source:NCBI gene;Acc:416715]
46. LSM6 ENSGALG00000009985 18582 0.783 - - - - - - 0.783 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
47. AACS ENSGALG00000002899 960 0.783 - - - - - - - - 0.783 - acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
48. PDXDC1 ENSGALG00000034829 406 0.782 - - - - - - - - 0.782 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
49. CEP250 ENSGALG00000026151 163 0.782 - - - - - - - - 0.782 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
50. UQCRH ENSGALG00000017380 55734 0.782 - - - - - - 0.782 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
51. IFT88 1241 0.779 - - - - - - - - 0.779 - intraflagellar transport 88, transcript variant X3
52. FLRT3 ENSGALG00000008716 593 0.777 - - - - - - - - 0.777 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
53. PEX3 ENSGALG00000013777 3158 0.776 - - - - - - - - 0.776 - peroxisomal biogenesis factor 3
54. MTSS1 ENSGALG00000041969 1312 0.776 - - - - - - - - 0.776 - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
55. LGALS1_1 ENSGALG00000012420 1560 0.775 - - - - - - 0.775 - - - galectin 1 [Source:NCBI gene;Acc:396491]
56. SMAP2 ENSGALG00000029244 498 0.773 - - - - - - - - 0.773 - small ArfGAP2 [Source:NCBI gene;Acc:419641]
57. SWIP-1 SWIP-1 6024 0.772 - - - - - - - 0.772 - -
58. TPST2 ENSGALG00000005626 945 0.772 - - - - - - - - 0.772 - tyrosylprotein sulfotransferase 2 [Source:NCBI gene;Acc:416910]
59. GPR27 ENSGALG00000027091 8111 0.771 - - - - - - 0.771 - - - G protein-coupled receptor 27
60. C12H3ORF19 C12H3ORF19 1278 0.77 - - - - - - 0.770 - - -
61. LHCGR ENSGALG00000009095 174 0.769 - - - - - - - - 0.769 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
62. MAP3K5 ENSGALG00000013892 565 0.768 - - - - - - - - 0.768 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
63. METTL5 ENSGALG00000009676 3252 0.768 - - - - - - 0.768 - - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
64. FAM120B ENSGALG00000011180 101 0.767 - - - - - - - - 0.767 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
65. HNRNPH3 ENSGALG00000003947 28724 0.767 - - - - - - - - 0.767 - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
66. PCDH17 ENSGALG00000016941 1006 0.767 - - - - - - - - 0.767 - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
67. TRIP11 ENSGALG00000010763 3146 0.764 - - - - - - - - 0.764 - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
68. DCP1B 1306 0.764 - - - - - - - - 0.764 - decapping mRNA 1B
69. AASDH ENSGALG00000013764 1062 0.764 - - - - - - - - 0.764 - aminoadipate-semialdehyde dehydrogenase [Source:HGNC Symbol;Acc:HGNC:23993]
70. PCYT2 ENSGALG00000007251 2277 0.763 - - - - - - - - 0.763 - phosphate cytidylyltransferase 2, ethanolamine [Source:NCBI gene;Acc:422093]
71. TRIM3 ENSGALG00000034004 110 0.762 - - - - - - - - 0.762 - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
72. KIAA1217 ENSGALG00000007766 144 0.762 - - - - - - - - 0.762 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
73. TOM1L2 ENSGALG00000004902 89 0.761 - - - - - - - - 0.761 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
74. IQCA1 ENSGALG00000003980 87 0.759 - - - - - - - - 0.759 - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
75. TRIM8 ENSGALG00000036785 5304 0.759 - - - - - - - 0.759 - - tripartite motif containing 8 [Source:NCBI gene;Acc:423864]
76. ZC3H3 ENSGALG00000043265 1638 0.759 - - - - - - 0.759 - - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
77. PDSS2 ENSGALG00000015313 280 0.759 - - - - - - - - 0.759 - Gallus gallus prenyl (decaprenyl) diphosphate synthase, subunit 2 (PDSS2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318441]
78. PRDM15 ENSGALG00000019178 2729 0.758 - - - - - - - - 0.758 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
79. TTLL5 ENSGALG00000010340 4875 0.758 - - - - - - - - 0.758 - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
80. ALMS1 ENSGALG00000044620 570 0.757 - - - - - - - - 0.757 - ALMS1, centrosome and basal body associated protein, transcript variant X1
81. GRIN3A ENSGALG00000015551 856 0.757 - - - - - - - - 0.757 - glutamate ionotropic receptor NMDA type subunit 3A [Source:HGNC Symbol;Acc:HGNC:16767]
82. FDFT1 ENSGALG00000016665 3053 0.757 - - - - - - - - 0.757 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
83. CARS2 ENSGALG00000016847 3814 0.756 - - - - - - - - 0.756 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
84. RBBP8 ENSGALG00000014982 3255 0.756 - - - - - - - - 0.756 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
85. NDUFB1 ENSGALG00000028537 2059 0.756 - - - - - - 0.756 - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
86. OPTN ENSGALG00000013738 1024 0.755 - - - - - - 0.755 - - - optineurin [Source:NCBI gene;Acc:374079]
87. PLK1 ENSGALG00000006110 12892 0.754 - - - - - - - 0.754 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
88. ENSGALG00000026802 ENSGALG00000026802 14688 0.754 - - - - - - - 0.754 - -
89. RNMTL1 RNMTL1 2889 0.753 - - - - - - - - 0.753 -
90. NTL ENSGALG00000005156 278 0.753 - - - - - - - - 0.753 - neurotrypsin-like, transcript variant X7
91. HEATR3 ENSGALG00000041613 2704 0.752 - - - - - - 0.752 - - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
92. TRIP13 ENSGALG00000033834 6590 0.752 - - - - - - - - 0.752 - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
93. ZDHHC7 ENSGALG00000042522 1774 0.752 - - - - - - - - 0.752 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
94. SUMF1 ENSGALG00000008286 941 0.752 - - - - - - - 0.752 - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
95. MARVELD2 ENSGALG00000027140 828 0.752 - - - - - - - - 0.752 - MARVEL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26401]
96. PCLO 249 0.751 - - - - - - - - 0.751 - piccolo presynaptic cytomatrix protein
97. FANCB ENSGALG00000016569 1193 0.751 - - - - - - - - 0.751 - FA complementation group B [Source:NCBI gene;Acc:418628]
98. MTBP ENSGALG00000031524 1680 0.751 - - - - - - 0.751 - - - MDM2 binding protein [Source:HGNC Symbol;Acc:HGNC:7417]
99. TMED2 ENSGALG00000003307 20704 0.75 - - - - - - 0.750 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
100. ASNSD1 ENSGALG00000041666 3757 0.75 - - - - - - 0.750 - - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA