Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ATG4A

Gene Name Gene ID Reads Annotation
ATG4A ENSGALG00000008282 849 autophagy related 4A cysteine peptidase [Source:NCBI gene;Acc:772074]











Genes with expression patterns similar to ATG4A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATG4A ENSGALG00000008282 849 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 autophagy related 4A cysteine peptidase [Source:NCBI gene;Acc:772074]
2. MAP3K8 ENSGALG00000007356 188 0.787 - - 0.787 - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
3. SPRYD7 ENSGALG00000017010 1910 0.778 - - - - - 0.778 - - - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
4. C9orf91 C9orf91 629 0.776 - - - - - 0.776 - - - -
5. ABCC10 2213 0.773 - - 0.773 - - - - - - - ATP binding cassette subfamily C member 10, transcript variant X10
6. ZNF341 ENSGALG00000002968 1028 0.773 - - 0.773 - - - - - - - zinc finger protein 341 [Source:NCBI gene;Acc:419152]
7. LAMP1 ENSGALG00000037697 247 0.771 - - 0.771 - - - - - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
8. ZRANB3 ENSGALG00000012223 475 0.77 - - 0.770 - - - - - - - zinc finger RANBP2-type containing 3 [Source:HGNC Symbol;Acc:HGNC:25249]
9. CAST ENSGALG00000014682 900 0.769 - - 0.769 - - - - - - - calpastatin [Source:NCBI gene;Acc:427121]
10. WDR26 ENSGALG00000043081 1641 0.767 - - - - - - 0.767 - - - WD repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:21208]
11. ENSGALG00000011942 ENSGALG00000011942 175 0.763 - - 0.763 - - - - - - -
12. N6AMT2 N6AMT2 4703 0.759 - - - - - 0.759 - - - -
13. BFAR ENSGALG00000003111 1778 0.757 - - 0.757 - - - - - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
14. SSX2IP ENSGALG00000008763 354 0.754 - - 0.754 - - - - - - - SSX family member 2 interacting protein [Source:NCBI gene;Acc:424532]
15. TBCK ENSGALG00000010564 1546 0.754 - - 0.754 - - - - - - - TBC1 domain containing kinase [Source:NCBI gene;Acc:422534]
16. KCNE3 ENSGALG00000022696 561 0.754 - - - - - 0.754 - - - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
17. ARHGAP6 ENSGALG00000016602 1098 0.751 - - - - - 0.751 - - - - Rho GTPase activating protein 6 [Source:HGNC Symbol;Acc:HGNC:676]
18. SPATA18 ENSGALG00000013964 609 0.751 - - - - - 0.751 - - - - spermatogenesis associated 18 [Source:HGNC Symbol;Acc:HGNC:29579]
19. HPS3 ENSGALG00000040089 44 0.749 - - 0.749 - - - - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
20. KIAA1239 KIAA1239 263 0.749 - - - - - 0.749 - - - -
21. STXBP3 ENSGALG00000002001 1740 0.749 - - 0.749 - - - - - - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
22. IMPA1 ENSGALG00000034487 3691 0.746 - - 0.746 - - - - - - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
23. BECN1 ENSGALG00000002973 1569 0.745 - - 0.745 - - - - - - - beclin 1 [Source:NCBI gene;Acc:420018]
24. PRKCE ENSGALG00000010000 99 0.739 - - 0.739 - - - - - - - protein kinase C epsilon, transcript variant X1
25. EIF4ENIF1 ENSGALG00000006898 24 0.735 - - - - - 0.735 - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
26. C1H11ORF70 ENSGALG00000017189 395 0.735 - - 0.735 - - - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
27. CASR ENSGALG00000038405 53 0.735 - - - - - 0.735 - - - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
28. PVALB1 PVALB1 267 0.733 - - - - - 0.733 - - - -
29. DPP10 ENSGALG00000012156 20 0.733 - - - - - 0.733 - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
30. AGO1 ENSGALG00000002249 125 0.733 - - - - - 0.733 - - - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
31. LY96 ENSGALG00000032701 18 0.733 - - - - - 0.733 - - - - lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
32. EVA1CL ENSGALG00000004734 168 0.733 - - - - - 0.733 - - - - protein eva-1 homolog C-like, transcript variant X2
33. FAM208B 24 0.733 - - - - - 0.733 - - - - family with sequence similarity 208 member B, transcript variant X3
34. PPIP5K1 ENSGALG00000008385 7 0.733 - - - - - 0.733 - - - - diphosphoinositol pentakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:29023]
35. PPM1L ENSGALG00000009537 5 0.733 - - - - - 0.733 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1L [Source:HGNC Symbol;Acc:HGNC:16381]
36. ENSGALG00000023485 ENSGALG00000023485 46 0.733 - - - - - 0.733 - - - -
37. ATP6V1AL ENSGALG00000000048 21 0.733 - - - - - 0.733 - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
38. MICAL1 ENSGALG00000032190 134 0.733 - - 0.733 - - - - - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:NCBI gene;Acc:429474]
39. ALDH6A1 ENSGALG00000010211 29 0.733 - - - - - 0.733 - - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
40. FMN1 ENSGALG00000009723 100 0.731 - - - - - 0.731 - - - - formin 1 [Source:NCBI gene;Acc:386747]
41. GXYLT1 ENSGALG00000009532 5682 0.73 - - - - - - - 0.730 - - glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
42. KIF13A ENSGALG00000012689 119 0.729 - - - - - 0.729 - - - - kinesin family member 13A [Source:HGNC Symbol;Acc:HGNC:14566]
43. TSPAN14 ENSGALG00000002414 69 0.728 - - 0.728 - - - - - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
44. SLC25A26 ENSGALG00000007467 255 0.727 - - - - - 0.727 - - - - solute carrier family 25 member 26 [Source:NCBI gene;Acc:416084]
45. WDR34 ENSGALG00000004702 909 0.727 - - - - - - 0.727 - - - WD repeat domain 34 [Source:HGNC Symbol;Acc:HGNC:28296]
46. DNAH12 ENSGALG00000005601 80 0.727 - - - - - 0.727 - - - - dynein, axonemal, heavy chain 12, transcript variant X6
47. KIAA1919 KIAA1919 58 0.725 - - - - - 0.725 - - - -
48. LETM1 ENSGALG00000015706 2366 0.724 - - - - - - - 0.724 - - leucine zipper and EF-hand containing transmembrane protein 1 [Source:NCBI gene;Acc:422898]
49. SUN1 ENSGALG00000003781 3442 0.723 - - 0.723 - - - - - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
50. PCDH12 ENSGALG00000002544 36 0.722 - - - - - 0.722 - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
51. PLEKHA8 ENSGALG00000011185 101 0.72 - - 0.720 - - - - - - - pleckstrin homology domain containing A8 [Source:HGNC Symbol;Acc:HGNC:30037]
52. RYR3 ENSGALG00000009705 30 0.718 - - - - - 0.718 - - - - ryanodine receptor 3 [Source:NCBI gene;Acc:396111]
53. SFRP2 ENSGALG00000009241 4716 0.717 - - 0.717 - - - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
54. ANO5 ENSGALG00000003748 3959 0.717 - - 0.717 - - - - - - - anoctamin 5 [Source:NCBI gene;Acc:422973]
55. CACNA1S 63 0.717 - - - - - 0.717 - - - - calcium voltage-gated channel subunit alpha1 S, transcript variant X4
56. ATG12 ENSGALG00000002345 3607 0.716 - - 0.716 - - - - - - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
57. RCAN1 ENSGALG00000016014 95 0.711 - - 0.711 - - - - - - - regulator of calcineurin 1 [Source:NCBI gene;Acc:418510]
58. KIF20AL ENSGALG00000015404 5 0.711 - - - - - - - - - 0.711 kinesin family member 20A-like, transcript variant X7
59. ENSGALG00000026578 ENSGALG00000026578 4 0.711 - - - - - - - - - 0.711
60. DIRAS2 ENSGALG00000005323 11 0.711 - - - - - - - - - 0.711 DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
61. DHX40 ENSGALG00000005126 2815 0.71 - - 0.710 - - - - - - - DEAH-box helicase 40 [Source:HGNC Symbol;Acc:HGNC:18018]
62. CENPO ENSGALG00000016609 1699 0.71 - - - - - - 0.710 - - - centromere protein O [Source:NCBI gene;Acc:422014]
63. C16orf72 ENSGALG00000007291 228 0.71 - - - - - 0.710 - - - - chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
64. ENSGALG00000025953 ENSGALG00000025953 65 0.71 - - - - - 0.710 - - - -
65. MADCAM1 ENSGALG00000028341 6 0.71 - - - - - 0.710 - - - - mucosal vascular addressin cell adhesion molecule 1
66. MCF2L2 ENSGALG00000008744 8 0.709 - - - - - 0.709 - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
67. FGFR1OP2 ENSGALG00000014084 1881 0.709 - - 0.709 - - - - - - - FGFR1 oncogene partner 2 [Source:NCBI gene;Acc:418214]
68. LINS LINS 18 0.707 - - - - - 0.707 - - - -
69. CABP2 ENSGALG00000037497 329 0.707 - - 0.707 - - - - - - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
70. USP2 ENSGALG00000006755 2843 0.705 - - - - - - 0.705 - - - ubiquitin specific peptidase 2, transcript variant X5
71. C2orf50 ENSGALG00000046449 17 0.705 - - - - - 0.705 - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
72. RGS12 ENSGALG00000015626 280 0.705 - - - - - 0.705 - - - - regulator of G protein signaling 12 [Source:HGNC Symbol;Acc:HGNC:9994]
73. C3AR1 ENSGALG00000013218 32 0.704 - - - - - 0.704 - - - - complement C3a receptor 1 [Source:NCBI gene;Acc:418198]
74. LRRC58 ENSGALG00000033186 15 0.703 - - - - - 0.703 - - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
75. MMP16 ENSGALG00000032031 827 0.702 - - - - - 0.702 - - - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
76. TMX3 ENSGALG00000013757 6387 0.701 - - 0.701 - - - - - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
77. FANCB ENSGALG00000016569 1193 0.701 - - 0.701 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
78. TMEM136 ENSGALG00000026316 668 0.701 - - 0.701 - - - - - - - transmembrane protein 136 [Source:NCBI gene;Acc:100857845]
79. SHC1 ENSGALG00000039775 219 0.7 - - - - - 0.700 - - - - SHC adaptor protein 1 [Source:NCBI gene;Acc:395934]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA