Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARHGEF6

Gene Name Gene ID Reads Annotation
ARHGEF6 ENSGALG00000006439 5275 Rac/Cdc42 guanine nucleotide exchange factor 6 [Source:NCBI gene;Acc:422247]











Genes with expression patterns similar to ARHGEF6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARHGEF6 ENSGALG00000006439 5275 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rac/Cdc42 guanine nucleotide exchange factor 6 [Source:NCBI gene;Acc:422247]
2. CABP1 ENSGALG00000007116 54 0.808 - - - 0.808 - - - - - - calcium binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1384]
3. ENSGALG00000002749 ENSGALG00000002749 1033 0.803 - - - - - - - 0.803 - -
4. JOSD1 ENSGALG00000041766 1445 0.792 - - - - - - 0.792 - - - Josephin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28953]
5. ISL1 ENSGALG00000014884 7666 0.782 - - - - - - 0.782 - - - ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
6. LOC100858777 ENSGALG00000027624 58 0.781 - - - 0.781 - - - - - - rhodopsin, GQ-coupled-like
7. NCDN ENSGALG00000002408 6180 0.778 - - - 0.778 - - - - - - neurochondrin [Source:NCBI gene;Acc:419633]
8. KIAA1324L ENSGALG00000030324 1695 0.775 - - - - - - 0.775 - - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
9. PROC ENSGALG00000001780 26 0.773 - - - 0.773 - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
10. RYR2 ENSGALG00000010812 95 0.773 - - - 0.773 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
11. MMR1L3 ENSGALG00000008638 26 0.77 - - - 0.770 - - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
12. ANKRD28 ENSGALG00000011226 160 0.77 - - - 0.770 - - - - - - ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
13. C8B ENSGALG00000010853 21 0.77 - - - 0.770 - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
14. BFIV21 BFIV21 30 0.769 - - - 0.769 - - - - - -
15. AIM1 51 0.768 - - - 0.768 - - - - - - absent in melanoma 1, transcript variant X2
16. SIGMAR1 ENSGALG00000028996 12267 0.765 - - - - - 0.765 - - - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
17. ENSGALG00000010336 ENSGALG00000010336 16 0.764 - - - 0.764 - - - - - -
18. PLEKHM1 ENSGALG00000000201 1300 0.763 - - - - - - - 0.763 - - pleckstrin homology and RUN domain containing M1 [Source:NCBI gene;Acc:419939]
19. PPIE ENSGALG00000013383 3923 0.761 - - - - - - 0.761 - - - peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]
20. GRIN2A ENSGALG00000007278 17 0.758 - - - 0.758 - - - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
21. CUBN ENSGALG00000008704 21 0.757 - - - 0.757 - - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
22. KIF1B ENSGALG00000002726 461 0.757 - - - 0.757 - - - - - - kinesin family member 1B [Source:HGNC Symbol;Acc:HGNC:16636]
23. ATG4C ENSGALG00000010985 6102 0.756 - - - - - - 0.756 - - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
24. CFAP74 ENSGALG00000001288 54 0.755 - - - 0.755 - - - - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
25. KIAA0319L ENSGALG00000002445 75 0.754 - - - 0.754 - - - - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
26. TMEM200B ENSGALG00000024318 117 0.754 - - - - - 0.754 - - - - transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
27. EPB41L4A ENSGALG00000000234 113 0.753 - - - 0.753 - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
28. PCDH9 ENSGALG00000016908 788 0.753 - - - 0.753 - - - - - - protocadherin 9, transcript variant X1
29. C11orf74 C11orf74 260 0.753 - - - - - 0.753 - - - -
30. MRPS14 ENSGALG00000030028 1987 0.751 - - - 0.751 - - - - - - mitochondrial ribosomal protein S14 [Source:NCBI gene;Acc:424436]
31. RASAL2 ENSGALG00000004323 55 0.745 - - - 0.745 - - - - - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
32. TMEM175 ENSGALG00000015368 3342 0.741 - - - - - - 0.741 - - - transmembrane protein 175 [Source:NCBI gene;Acc:427293]
33. FURIN ENSGALG00000008341 2609 0.74 - - - - - - - 0.740 - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
34. PHGDH ENSGALG00000002988 6912 0.737 - - - - - - - 0.737 - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
35. UBE2A ENSGALG00000008648 174 0.735 - - - 0.735 - - - - - - ubiquitin conjugating enzyme E2 A [Source:NCBI gene;Acc:395672]
36. TMEM128 ENSGALG00000014992 6567 0.735 - - 0.735 - - - - - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
37. ZMYM4 ENSGALG00000002499 435 0.734 - - - 0.734 - - - - - - zinc finger MYM-type containing 4, transcript variant X1
38. SRR ENSGALG00000003155 93 0.733 - - - 0.733 - - - - - - serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
39. CDC42BPA ENSGALG00000009158 3926 0.732 - - 0.732 - - - - - - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
40. ENSGALG00000026058 ENSGALG00000026058 144 0.73 - - - 0.730 - - - - - -
41. EXOC2 ENSGALG00000012837 4914 0.729 - - - - - - 0.729 - - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
42. FLNB ENSGALG00000005678 68 0.729 - - - 0.729 - - - - - - filamin B [Source:NCBI gene;Acc:378913]
43. NTN4 ENSGALG00000011406 72 0.727 - - - 0.727 - - - - - - netrin 4 [Source:HGNC Symbol;Acc:HGNC:13658]
44. SPATA16 ENSGALG00000030383 7 0.727 - - - - - - - 0.727 - - spermatogenesis associated 16 [Source:HGNC Symbol;Acc:HGNC:29935]
45. LRRCC1 ENSGALG00000039499 480 0.727 - - - - - - - 0.727 - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
46. TCEA2 ENSGALG00000005976 9143 0.726 - - 0.726 - - - - - - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
47. RAB21 ENSGALG00000010183 7718 0.726 - - - - - - - 0.726 - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
48. ZDHHC7 ENSGALG00000042522 1774 0.725 - - - 0.725 - - - - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
49. U2SURP ENSGALG00000002612 4255 0.725 - - - - - - 0.725 - - - U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
50. PFKFB3 ENSGALG00000040369 2119 0.724 - - 0.724 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:HGNC Symbol;Acc:HGNC:8874]
51. TPO_1 ENSGALG00000016370 78 0.724 - - - - - - - 0.724 - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
52. TMC7 ENSGALG00000006889 125 0.724 - - - 0.724 - - - - - - transmembrane channel like 7 [Source:NCBI gene;Acc:416610]
53. METAP1 ENSGALG00000012239 1125 0.723 - - - - - - - 0.723 - - methionyl aminopeptidase 1 [Source:NCBI gene;Acc:422704]
54. ZNF276 ENSGALG00000000513 2410 0.722 - - 0.722 - - - - - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
55. ENSGALG00000019568 ENSGALG00000019568 25 0.722 - - - - - 0.722 - - - -
56. ENSGALG00000004643 ENSGALG00000004643 2297 0.721 - - - - - - 0.721 - - -
57. ADAP2 ENSGALG00000003319 134 0.721 - - - 0.721 - - - - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
58. RBM5 30998 0.721 - - 0.721 - - - - - - - RNA binding motif protein 5, transcript variant X1
59. TMX1 ENSGALG00000020340 6 0.719 - - - - - 0.719 - - - - thioredoxin related transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:15487]
60. NSG1 ENSGALG00000015010 5829 0.719 - - 0.719 - - - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
61. CCDC61 ENSGALG00000006714 8066 0.719 - - 0.719 - - - - - - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
62. RPLP1 ENSGALG00000030878 445592 0.718 - - - 0.718 - - - - - - ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
63. H3-IX H3-IX 155627 0.718 - - 0.718 - - - - - - -
64. PRPF39 184 0.718 - - - - - 0.718 - - - - pre-mRNA processing factor 39, transcript variant X7
65. FAM134A 1600 0.718 - - 0.718 - - - - - - - family with sequence similarity 134 member A
66. AXIN1 ENSGALG00000029402 2802 0.717 - - 0.717 - - - - - - - axin 1 [Source:NCBI gene;Acc:395786]
67. GUK1 ENSGALG00000005336 5134 0.716 - - 0.716 - - - - - - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
68. CHCHD6 ENSGALG00000006056 6121 0.716 - - 0.716 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
69. CPA6 ENSGALG00000041918 54 0.715 - - - - - 0.715 - - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
70. HEATR2 HEATR2 2143 0.714 - - - - - - 0.714 - - -
71. ARF4 ENSGALG00000005622 50567 0.714 - - 0.714 - - - - - - - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
72. DNAJC13 ENSGALG00000035068 180 0.714 - - - 0.714 - - - - - - DnaJ heat shock protein family (Hsp40) member C13 [Source:HGNC Symbol;Acc:HGNC:30343]
73. BCLAF1 ENSGALG00000013935 7596 0.714 - - - - - - 0.714 - - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
74. MYCBPAP ENSGALG00000007661 369 0.714 - - - - - - - 0.714 - - MYCBP associated protein [Source:HGNC Symbol;Acc:HGNC:19677]
75. ENSGALG00000027352 ENSGALG00000027352 69 0.713 - - - - - 0.713 - - - -
76. TBC1D12 ENSGALG00000034044 5588 0.712 - - 0.712 - - - - - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
77. AMMECR1L ENSGALG00000026728 2134 0.712 - - 0.712 - - - - - - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
78. LTA4H ENSGALG00000033709 15826 0.711 - - 0.711 - - - - - - - leukotriene A4 hydrolase [Source:NCBI gene;Acc:417918]
79. RNPS1 ENSGALG00000009288 13588 0.711 - - 0.711 - - - - - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
80. ATXN3 ENSGALG00000010766 48 0.71 - - - 0.710 - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
81. EVC ENSGALG00000015037 1963 0.71 - - - - - - 0.710 - - - EvC ciliary complex subunit 1 [Source:NCBI gene;Acc:422851]
82. MOV10 ENSGALG00000001558 244 0.71 - - - - - - - 0.710 - - Mov10 RISC complex RNA helicase [Source:NCBI gene;Acc:419872]
83. IGF2R ENSGALG00000011621 81 0.709 - - - - - - - 0.709 - - insulin like growth factor 2 receptor [Source:NCBI gene;Acc:395817]
84. XPO6 ENSGALG00000035360 7042 0.709 - - - - - - - - - 0.709 exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
85. RB1CC1 ENSGALG00000015259 4211 0.708 - - - - - - 0.708 - - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
86. LRIG3 ENSGALG00000009755 6655 0.707 - - - - - - 0.707 - - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
87. MTSS1 ENSGALG00000041969 1312 0.707 - - - - - - 0.707 - - - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
88. C8orf4 C8orf4 197 0.707 - - - 0.707 - - - - - -
89. NIPSNAP3L ENSGALG00000027334 7514 0.706 - - 0.706 - - - - - - - nipsnap homolog 3-like
90. ZFAND2B ENSGALG00000029226 4107 0.706 - - 0.706 - - - - - - - zinc finger AN1-type containing 2B [Source:HGNC Symbol;Acc:HGNC:25206]
91. LASP-2 LASP-2 4415 0.704 - - - - - - - 0.704 - -
92. FOPNL ENSGALG00000006532 2922 0.704 - - 0.704 - - - - - - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
93. C7orf55 C7orf55 7083 0.704 - - - - - - - - 0.704 -
94. GLS ENSGALG00000030419 440 0.704 - - - - - 0.704 - - - - glutaminase [Source:NCBI gene;Acc:424043]
95. LSM4 ENSGALG00000003385 4050 0.703 - - 0.703 - - - - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:17259]
96. TSEN2 ENSGALG00000004981 1929 0.703 - - 0.703 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
97. HYI ENSGALG00000033943 2489 0.702 - - 0.702 - - - - - - - hydroxypyruvate isomerase (putative) [Source:NCBI gene;Acc:424567]
98. PLIN2 ENSGALG00000015090 1290 0.702 - - - - - - 0.702 - - - perilipin 2 [Source:NCBI gene;Acc:427237]
99. PI4K2A ENSGALG00000006143 1863 0.702 - - 0.702 - - - - - - - phosphatidylinositol 4-kinase type 2 alpha
100. PMP22 ENSGALG00000031425 5358 0.701 - - - - - - 0.701 - - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]

There are 2 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA