Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for znrf1

Gene Name Gene ID Reads Annotation
znrf1 ENSDARG00000020475 303 zinc and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1905]










Genes with expression patterns similar to znrf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. znrf1 ENSDARG00000020475 303 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1905]
2. mtx3 ENSDARG00000090195 42 1.8 - 0.967 - 0.833 - - - - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
3. C18H15orf26 C18H15orf26 36 1.696 - 0.882 - 0.814 - - - - -
4. rprmb ENSDARG00000024006 120 1.677 - 0.783 - 0.894 - - - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
5. sbno2a ENSDARG00000098801 40 1.635 - 0.773 - 0.862 - - - - - strawberry notch homolog 2a [Source:ZFIN;Acc:ZDB-GENE-100629-3]
6. SNORA62 SNORA62 39 1.629 - 0.819 0.810 - - - - - -
7. rnf152 ENSDARG00000087782 141 1.617 - - 0.722 0.895 - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
8. spata18 ENSDARG00000052343 216 1.575 0.800 - - 0.775 - - - - - spermatogenesis associated 18 [Source:ZFIN;Acc:ZDB-GENE-050522-306]
9. si:dkey-253d23.5 ENSDARG00000058566 237 1.565 - 0.802 - 0.763 - - - - - si:dkey-253d23.5 [Source:ZFIN;Acc:ZDB-GENE-050208-729]
10. pald1b ENSDARG00000039352 66 1.55 - - 0.754 0.796 - - - - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
11. hps1 ENSDARG00000026170 131 1.525 0.702 - - 0.823 - - - - - Hermansky-Pudlak syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-051113-152]
12. rhof ENSDARG00000054389, ENSDARG00000111798 15 1.525 0.717 0.808 - - - - - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
13. reps1 ENSDARG00000002877 962 1.522 - 0.752 - - - 0.770 - - - RALBP1 associated Eps domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9536]
14. ENSDARG00000090222 ENSDARG00000090222 402 1.52 - 0.815 - 0.705 - - - - -
15. fanci ENSDARG00000026224 415 1.489 - - - 0.768 - - 0.721 - - FA complementation group I [Source:ZFIN;Acc:ZDB-GENE-030131-2905]
16. admb ENSDARG00000069027 67 1.475 0.717 0.758 - - - - - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
17. si:dkey-93n13.2 ENSDARG00000092816 119 1.473 0.735 - 0.738 - - - - - - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
18. rbm4.1 ENSDARG00000036386 625 1.465 - 0.738 - - - 0.727 - - - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
19. fam73b 76 1.464 - 0.716 0.748 - - - - - - family with sequence similarity 73, member B
20. taok3a ENSDARG00000060751 254 1.453 - 0.705 - 0.748 - - - - - TAO kinase 3a [Source:ZFIN;Acc:ZDB-GENE-100921-50]
21. mtmr9 ENSDARG00000015860 1339 1.431 - - 0.716 - - 0.715 - - - myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
22. immp2l ENSDARG00000004925 215 1.426 - 0.711 - 0.715 - - - - - inner mitochondrial membrane peptidase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040808-9]
23. CDH24 CDH24 325 1.412 - 0.705 - - - 0.707 - - -
24. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.407 0.705 0.702 - - - - - - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
25. znf516 ENSDARG00000070809 65 0.961 - 0.961 - - - - - - - zinc finger protein 516 [Source:ZFIN;Acc:ZDB-GENE-060503-194]
26. CABZ01020207.1 CABZ01020207.1 145 0.95 - 0.950 - - - - - - -
27. znf106b ENSDARG00000091947 108 0.923 - 0.923 - - - - - - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
28. spata6 ENSDARG00000021115 128 0.915 - 0.915 - - - - - - - spermatogenesis associated 6 [Source:ZFIN;Acc:ZDB-GENE-050417-351]
29. naif1 ENSDARG00000062753 176 0.907 - 0.907 - - - - - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
30. GRM5_1 GRM5_1 18 0.897 - 0.897 - - - - - - -
31. SLITRK5 SLITRK5 122 0.897 - 0.897 - - - - - - -
32. mfsd6l ENSDARG00000014761 60 0.897 - 0.897 - - - - - - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
33. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 0.897 - 0.897 - - - - - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
34. si:dkey-178a21.3 si:dkey-178a21.3 23 0.897 - 0.897 - - - - - - -
35. zgc:153722 ENSDARG00000071044, ENSDARG00000110778, ENSDARG00000113166 70 0.893 0.893 - - - - - - - - zgc:153722 [Source:ZFIN;Acc:ZDB-GENE-060929-84]
36. bmb ENSDARG00000096603 120 0.888 - 0.888 - - - - - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
37. afap1 ENSDARG00000055284 730 0.887 - - - 0.887 - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
38. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 0.884 - 0.884 - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
39. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 0.884 - 0.884 - - - - - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
40. dph1 ENSDARG00000057973 191 0.884 - 0.884 - - - - - - - diphthamide biosynthesis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-411]
41. trim36 ENSDARG00000062794 785 0.884 - 0.884 - - - - - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
42. cog6 ENSDARG00000103149 39 0.884 - 0.884 - - - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
43. MAN1B1 MAN1B1 47 0.884 - 0.884 - - - - - - -
44. CABZ01046997.2 CABZ01046997.2 7 0.884 - 0.884 - - - - - - -
45. cox5aa ENSDARG00000088383 21 0.884 - 0.884 - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
46. DYRK3 ENSDARG00000070600, ENSDARG00000115625 127 0.883 - 0.883 - - - - - - - dual specificity tyrosine phosphorylation regulated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-080219-31]
47. si:ch211-173n18.4 129 0.882 - 0.882 - - - - - - - si:ch211-173n18.4, transcript variant X1
48. si:dkey-32e23.4 ENSDARG00000063159 28 0.882 - 0.882 - - - - - - - si:dkey-32e23.4 [Source:ZFIN;Acc:ZDB-GENE-081105-41]
49. BX511013.1 ENSDARG00000112403 1018 0.879 - 0.879 - - - - - - - uncharacterized LOC103908633 [Source:NCBI gene;Acc:103908633]
50. fgf8b ENSDARG00000039615 29 0.877 - - - 0.877 - - - - - fibroblast growth factor 8 b [Source:ZFIN;Acc:ZDB-GENE-010122-1]
51. CR388231.1 ENSDARG00000098710 153 0.877 - 0.877 - - - - - - -
52. LRAT LRAT 12 0.877 - - - 0.877 - - - - -
53. si:ch211-202h22.7 ENSDARG00000073912 18 0.876 - - - 0.876 - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
54. MAPK8IP1_1 MAPK8IP1_1 186 0.876 - 0.876 - - - - - - -
55. capsla ENSDARG00000103521 277 0.874 0.874 - - - - - - - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
56. CABZ01084815.1 CABZ01084815.1 351 0.874 - 0.874 - - - - - - -
57. RBBP6_11 RBBP6_11 6 0.873 - - - 0.873 - - - - -
58. cbln12 ENSDARG00000068232 4 0.873 - - - 0.873 - - - - - cerebellin 12 [Source:ZFIN;Acc:ZDB-GENE-070912-11]
59. Mar-11 Mar-11 5 0.873 - - - 0.873 - - - - -
60. THEM4 ENSDARG00000061621 364 0.873 - 0.873 - - - - - - - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
61. si:dkey-14d8.19 si:dkey-14d8.19 12 0.873 - - - 0.873 - - - - -
62. zgc:113090 ENSDARG00000053260, ENSDARG00000110502, ENSDARG00000115912 9 0.873 - - - 0.873 - - - - - zgc:113090 [Source:ZFIN;Acc:ZDB-GENE-050522-532]
63. CU695222.1 ENSDARG00000097132 4 0.873 - - - 0.873 - - - - -
64. gtf3c4 ENSDARG00000069538 130 0.872 - 0.872 - - - - - - - general transcription factor IIIC, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-041008-147]
65. lrtomt lrtomt 39 0.872 - 0.872 - - - - - - -
66. abhd6a ENSDARG00000060756 122 0.871 0.871 - - - - - - - - abhydrolase domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-090925-1]
67. gpn2_1 ENSDARG00000103127 14 0.871 - - - 0.871 - - - - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
68. si:dkey-14o18.3 si:dkey-14o18.3 5 0.871 - - - 0.871 - - - - -
69. ZNF70_14 ZNF70_14 19 0.868 - - - 0.868 - - - - -
70. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.868 0.868 - - - - - - - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
71. si:dkey-165g20.5 si:dkey-165g20.5 125 0.867 - 0.867 - - - - - - -
72. hhat ENSDARG00000074428 8 0.867 - - - 0.867 - - - - - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
73. podxl ENSDARG00000031228 1744 0.867 - 0.867 - - - - - - - podocalyxin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2805]
74. AL928712.1 AL928712.1 101 0.866 - 0.866 - - - - - - -
75. LRCH4 ENSDARG00000068258 22 0.865 - - - 0.865 - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
76. slc35c1 ENSDARG00000104669 65 0.864 - - - 0.864 - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
77. mc5ra ENSDARG00000031348 70 0.863 - 0.863 - - - - - - - melanocortin 5a receptor [Source:ZFIN;Acc:ZDB-GENE-021223-3]
78. syce2 ENSDARG00000103187 12 0.863 - 0.863 - - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
79. irg1 22 0.863 - - - 0.863 - - - - - immunoresponsive 1 homolog (mouse)
80. LSM5 ENSDARG00000071573 371 0.862 - 0.862 - - - - - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
81. si:dkey-27i16.3 si:dkey-27i16.3 494 0.862 - - - 0.862 - - - - -
82. si:ch211-113a14.17 15 0.862 - - - 0.862 - - - - - si:ch211-113a14.17
83. zgc:174700_1 zgc:174700_1 60 0.861 - 0.861 - - - - - - -
84. stx5al ENSDARG00000003175 21 0.861 0.861 - - - - - - - - syntaxin 5A, like [Source:ZFIN;Acc:ZDB-GENE-030131-1825]
85. crygm2d3 ENSDARG00000088823 1560 0.861 - 0.861 - - - - - - - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
86. si:ch211-274p24.2 ENSDARG00000095185 92 0.861 0.861 - - - - - - - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
87. zgc:173770 ENSDARG00000076476 34 0.861 0.861 - - - - - - - - zgc:173770 [Source:ZFIN;Acc:ZDB-GENE-070822-29]
88. SNORD65 SNORD65 35 0.861 0.861 - - - - - - - -
89. cryba2a ENSDARG00000030349 1342 0.861 0.861 - - - - - - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
90. VSIG10L ENSDARG00000089237 12 0.861 0.861 - - - - - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
91. CLMN ENSDARG00000096867 73 0.861 0.861 - - - - - - - - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
92. cryba1l1 ENSDARG00000032929 1868 0.861 0.861 - - - - - - - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
93. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 0.861 - 0.861 - - - - - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
94. dclk1a ENSDARG00000018856 177 0.861 0.861 - - - - - - - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
95. CABZ01071446.1 CABZ01071446.1 4 0.861 0.861 - - - - - - - -
96. si:ch211-198d23.1 ENSDARG00000092574 104 0.861 0.861 - - - - - - - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
97. zfyve26 ENSDARG00000040131 87 0.861 0.861 - - - - - - - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
98. DHDH DHDH 15 0.861 - 0.861 - - - - - - -
99. zgc:158254 ENSDARG00000071233 265 0.859 - 0.859 - - - - - - - zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
100. si:ch211-141e20.2 ENSDARG00000093349 61 0.859 - - - 0.859 - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]

There are 851 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA