Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for znrd1

Gene Name Gene ID Reads Annotation
znrd1 ENSDARG00000036070 684 zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]










Genes with expression patterns similar to znrd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. znrd1 ENSDARG00000036070 684 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
2. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 2.519 - 0.900 - - - - 0.767 0.852 - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
3. lyrm1 ENSDARG00000026281 303 2.452 0.703 0.928 - - - - 0.821 - - LYR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-210]
4. ZNF628 1104 1.925 - 0.974 - - - - - 0.951 - zinc finger protein 628, transcript variant X3
5. chsy3 ENSDARG00000069472 271 1.893 - 0.941 - - - - - 0.952 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
6. zic5 ENSDARG00000016022 1034 1.863 - 0.954 - - - - - 0.909 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
7. rb1 ENSDARG00000006782 1445 1.848 - 0.925 - - - - - 0.923 - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
8. pop5 ENSDARG00000053452 1347 1.846 - 0.946 - - - - - 0.900 - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
9. prc1b ENSDARG00000005993 780 1.756 - 0.913 - - - - - 0.843 - protein regulator of cytokinesis 1b [Source:ZFIN;Acc:ZDB-GENE-040426-777]
10. tdrd3 ENSDARG00000025421 633 1.745 0.772 0.973 - - - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
11. bub1bb ENSDARG00000074927 1667 1.713 - 0.828 - - - - - 0.885 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
12. exd3 ENSDARG00000063140 119 1.711 - - - - - - 0.757 0.954 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
13. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 1.699 - 0.734 - - - - - 0.965 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
14. C2H1orf27 245 1.698 0.745 - - - - - - 0.953 - c2h1orf27 homolog (H. sapiens), transcript variant X1
15. cabp2b ENSDARG00000052277 119 1.673 0.716 - - - - - - 0.957 - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
16. prdm10 ENSDARG00000104251 510 1.667 - 0.961 - - - - 0.706 - - PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]
17. crkl ENSDARG00000028699 2966 1.662 - 0.768 - - - - - 0.894 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
18. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.661 - 0.876 - - - - - 0.785 - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
19. idh3g ENSDARG00000023648 4877 1.602 0.748 - - - - - - 0.854 - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
20. plcg1 ENSDARG00000038442 5324 1.6 - 0.703 - - - - - 0.897 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
21. mdm4 ENSDARG00000057513 1954 1.593 - 0.779 - - - - - 0.814 - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
22. slc26a11 ENSDARG00000043021 157 1.592 - 0.892 - - - 0.700 - - - solute carrier family 26 (anion exchanger), member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5349]
23. LLPH ENSDARG00000055360 1456 1.575 - 0.738 - - - - - 0.837 - LLP homolog, long-term synaptic facilitation factor [Source:ZFIN;Acc:ZDB-GENE-051030-30]
24. msrb3 ENSDARG00000045658 988 1.563 0.705 0.858 - - - - - - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
25. ccdc93 ENSDARG00000040678 1131 1.552 - - - - - - 0.826 0.726 - coiled-coil domain containing 93 [Source:ZFIN;Acc:ZDB-GENE-060421-8315]
26. pogzb ENSDARG00000076542, ENSDARG00000113904 787 1.534 - - - 0.701 - - - 0.833 - pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3]
27. mir21-1 606 1.529 0.713 - - - - - - 0.816 - microRNA 21-1
28. slc35b4 ENSDARG00000071087 1030 1.528 - 0.703 - - - - - 0.825 - solute carrier family 35, member B4 [Source:ZFIN;Acc:ZDB-GENE-030131-2457]
29. TP53BP1 ENSDARG00000079000 997 1.526 - 0.822 - 0.704 - - - - - tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
30. fam129ba ENSDARG00000062970 1578 1.514 - 0.783 - - - - - 0.731 - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
31. PRKAB2 2489 1.505 - 0.764 - - - 0.741 - - - protein kinase, AMP-activated, beta 2 non-catalytic subunit
32. NAIF1_1 NAIF1_1 1336 1.501 0.704 0.797 - - - - - - -
33. bnip3lb ENSDARG00000028067 1029 1.456 0.730 0.726 - - - - - - - BCL2 interacting protein 3 like b [Source:ZFIN;Acc:ZDB-GENE-040325-1]
34. CABZ01080492.1 CABZ01080492.1 495 0.985 - 0.985 - - - - - - -
35. surf1 ENSDARG00000003592 551 0.985 - 0.985 - - - - - - - surfeit 1 [Source:ZFIN;Acc:ZDB-GENE-041108-2]
36. NTAN1 ENSDARG00000105182 844 0.984 - 0.984 - - - - - - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
37. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 0.984 - 0.984 - - - - - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
38. CT025914.2 CT025914.2 53 0.984 - 0.984 - - - - - - -
39. casp7 ENSDARG00000091836 657 0.982 - 0.982 - - - - - - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
40. si:ch73-138e16.8 175 0.981 - 0.981 - - - - - - - si:ch73-138e16.8
41. lhfp 700 0.981 - 0.981 - - - - - - - lipoma HMGIC fusion partner
42. epb41l4a ENSDARG00000040087 1013 0.981 - 0.981 - - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
43. C18H15orf61 C18H15orf61 104 0.98 - 0.980 - - - - - - -
44. BX321875.3 ENSDARG00000112569 24 0.98 - 0.980 - - - - - - -
45. si:dkey-57k17.1 ENSDARG00000104697 442 0.98 - 0.980 - - - - - - - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
46. PHF13 ENSDARG00000102023 1102 0.98 - 0.980 - - - - - - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
47. bbs4 ENSDARG00000063522 247 0.979 - 0.979 - - - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
48. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 0.979 - 0.979 - - - - - - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
49. ttc9c ENSDARG00000007025 463 0.979 - 0.979 - - - - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
50. hdac6 ENSDARG00000008384 144 0.978 - 0.978 - - - - - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
51. med30 ENSDARG00000101115 133 0.978 - 0.978 - - - - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
52. zdhhc6 ENSDARG00000075721 1494 0.978 - 0.978 - - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
53. rab34b ENSDARG00000010977 590 0.978 - 0.978 - - - - - - - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
54. pargl ENSDARG00000101719 155 0.978 - 0.978 - - - - - - - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
55. drd3 ENSDARG00000032131, ENSDARG00000110679 25 0.978 - 0.978 - - - - - - - dopamine receptor D3 [Source:ZFIN;Acc:ZDB-GENE-021119-1]
56. asmtl ENSDARG00000021433, ENSDARG00000114151 550 0.978 - 0.978 - - - - - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
57. CR759791.1 ENSDARG00000088591 160 0.978 - 0.978 - - - - - - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
58. ARHGAP32_1 ARHGAP32_1 124 0.977 - 0.977 - - - - - - -
59. lmf2a ENSDARG00000078094 352 0.977 - 0.977 - - - - - - - lipase maturation factor 2a [Source:ZFIN;Acc:ZDB-GENE-080723-47]
60. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 0.977 - 0.977 - - - - - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
61. gpr112b gpr112b 28 0.977 - 0.977 - - - - - - -
62. FP236276.2 FP236276.2 43 0.977 - 0.977 - - - - - - -
63. cnstb ENSDARG00000042759 105 0.977 - 0.977 - - - - - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
64. fam69c ENSDARG00000105040 295 0.977 - 0.977 - - - - - - - family with sequence similarity 69, member C [Source:ZFIN;Acc:ZDB-GENE-030131-8001]
65. skiv2l ENSDARG00000062206 268 0.976 - 0.976 - - - - - - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
66. cry5 ENSDARG00000019498 90 0.976 - 0.976 - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
67. exo1 ENSDARG00000056832, ENSDARG00000112534 186 0.976 - 0.976 - - - - - - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
68. shq1 ENSDARG00000058522 123 0.976 - 0.976 - - - - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
69. ctdspla ENSDARG00000071673 1447 0.976 - 0.976 - - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
70. crfb12 ENSDARG00000052413 47 0.975 - 0.975 - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
71. MSLNL MSLNL 41 0.975 - 0.975 - - - - - - -
72. si:ch73-83c10.2 si:ch73-83c10.2 22 0.975 - 0.975 - - - - - - -
73. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.975 - 0.975 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
74. fbln5 ENSDARG00000039273 105 0.975 - 0.975 - - - - - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
75. si:ch211-191a16.2 ENSDARG00000095665 16 0.975 - 0.975 - - - - - - - si:ch211-191a16.2 [Source:ZFIN;Acc:ZDB-GENE-081028-45]
76. qtrtd1 243 0.975 - 0.975 - - - - - - - queuine tRNA-ribosyltransferase domain containing 1, transcript variant X1
77. FOXO6_1 FOXO6_1 73 0.975 - 0.975 - - - - - - -
78. esm1 ENSDARG00000104370 186 0.975 - 0.975 - - - - - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
79. si:dkey-261l7.2 ENSDARG00000094345 51 0.975 - 0.975 - - - - - - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
80. uroc1 ENSDARG00000070394 357 0.975 - 0.975 - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
81. pou4f1 ENSDARG00000005559 821 0.975 - 0.975 - - - - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
82. C5H11orf1 C5H11orf1 78 0.975 - 0.975 - - - - - - -
83. si:ch211-198b3.1 si:ch211-198b3.1 765 0.974 - 0.974 - - - - - - -
84. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.974 - 0.974 - - - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
85. sema5a ENSDARG00000058821 333 0.974 - 0.974 - - - - - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
86. azi1_1 azi1_1 1375 0.974 - 0.974 - - - - - - -
87. ch25h ENSDARG00000045190 35 0.974 - 0.974 - - - - - - - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
88. NAIF1 ENSDARG00000062753 696 0.974 - 0.974 - - - - - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
89. LRIF1_1 LRIF1_1 228 0.974 - 0.974 - - - - - - -
90. si:ch211-149b19.3 ENSDARG00000076011 306 0.974 - 0.974 - - - - - - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
91. zgc:174275 ENSDARG00000099845 172 0.973 - 0.973 - - - - - - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
92. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.973 - 0.973 - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
93. ldb1a ENSDARG00000010137 3035 0.973 - 0.973 - - - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
94. fam43a ENSDARG00000043009 792 0.972 - 0.972 - - - - - - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
95. si:ch211-11n16.2 ENSDARG00000099779 417 0.972 - 0.972 - - - - - - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
96. AL929007.2 AL929007.2 117 0.972 - 0.972 - - - - - - -
97. ogfr ENSDARG00000037837 1001 0.972 - - - - - - - 0.972 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
98. rac3b ENSDARG00000020795 1523 0.971 - 0.971 - - - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
99. tgm1 ENSDARG00000017799 442 0.971 - 0.971 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
100. fbxo25 ENSDARG00000075172 153 0.971 - 0.971 - - - - - - - F-box protein 25 [Source:ZFIN;Acc:ZDB-GENE-040801-19]

There are 1218 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA