Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zic4

Gene Name Gene ID Reads Annotation
zic4 ENSDARG00000031307 1228 zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]










Genes with expression patterns similar to zic4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zic4 ENSDARG00000031307 1228 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
2. zic1 ENSDARG00000015567 2520 4.243 0.889 0.751 - - - 0.939 0.878 - 0.786 zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
3. slc1a3a ENSDARG00000104431 9888 3.622 0.940 0.823 - - - 0.973 0.886 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
4. atp2b3b ENSDARG00000023445 1424 3.581 0.894 0.868 - - - 0.943 0.876 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
5. pcdh1gc5 ENSDARG00000104826 10052 3.564 0.877 0.818 - - - 0.959 0.910 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
6. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.527 0.892 0.879 - - - 0.939 0.817 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
7. stx1b ENSDARG00000000503 2724 3.526 0.876 0.921 - - - 0.915 0.814 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
8. sept5a ENSDARG00000013843 1206 3.519 0.937 - - 0.997 - 0.773 0.812 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
9. nrn1a ENSDARG00000071860 1311 3.5 0.834 0.873 - - - 0.979 0.814 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
10. gap43 ENSDARG00000099744 4114 3.499 0.880 0.821 - - - 0.964 0.834 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
11. TUSC5 TUSC5 1436 3.489 0.933 0.908 - - - 0.943 0.705 - -
12. stmn2a ENSDARG00000033234 2272 3.483 0.886 0.846 - - - 0.957 0.794 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
13. syt11a ENSDARG00000057913 1145 3.482 0.758 0.863 - - - 0.967 0.894 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
14. cacna2d3 ENSDARG00000078760 211 3.478 0.835 0.868 - - - 0.891 0.884 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
15. snap25a ENSDARG00000020609 4537 3.465 0.875 0.835 - - - 0.934 0.821 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
16. pcsk1nl ENSDARG00000076170 1232 3.463 0.727 0.908 - - - 0.932 0.896 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
17. adam23a ENSDARG00000062323 580 3.456 0.844 0.889 - - - 0.877 0.846 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
18. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.455 0.872 0.800 - - - 0.941 0.842 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
19. gnao1a ENSDARG00000016676 8184 3.447 0.883 0.748 - 0.954 - - 0.862 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
20. TUBB8P7_1 TUBB8P7_1 2722 3.443 0.850 0.780 - - - 0.945 0.868 - -
21. slc32a1 ENSDARG00000059775 1092 3.431 0.881 0.877 - - - 0.914 0.759 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
22. cers6 ENSDARG00000053583 247 3.419 0.870 0.731 - - - 0.909 0.909 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
23. scn8aa ENSDARG00000005775 792 3.402 0.817 0.891 - - - 0.949 0.745 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
24. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 3.401 0.824 0.746 - - - 0.916 0.915 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
25. mapk12b ENSDARG00000006409 2246 3.376 0.774 0.859 - - - 0.904 0.839 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
26. tnika ENSDARG00000056218 728 3.371 0.871 0.769 - - - 0.865 0.866 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
27. atp1b4 ENSDARG00000053262 1337 3.368 0.735 0.836 - - - 0.951 0.846 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
28. sox2 ENSDARG00000070913 2763 3.365 0.752 0.949 - - - 0.814 0.850 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
29. MAP1A MAP1A 847 3.356 0.792 0.836 - - - 0.942 0.786 - -
30. slc1a2b ENSDARG00000102453 3136 3.352 0.908 0.760 - - - 0.940 0.744 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
31. SV2B SV2B 208 3.351 0.873 0.848 - - - 0.882 0.748 - -
32. cadm3 ENSDARG00000057013 1545 3.348 0.845 0.806 - - - 0.970 0.727 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
33. amph ENSDARG00000007663 599 3.346 0.852 0.848 - - - 0.884 0.762 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
34. nova2 ENSDARG00000017673 7685 3.343 0.753 0.860 - - - 0.852 0.878 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
35. dtnbb ENSDARG00000013020 280 3.342 0.782 0.789 - - - 0.862 0.909 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
36. pax6a ENSDARG00000103379 3061 3.341 - 0.776 - 0.971 - 0.863 0.731 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
37. nptx1l ENSDARG00000074671 569 3.331 0.806 0.810 - - - 0.897 0.818 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
38. dpysl5a ENSDARG00000011141 1827 3.331 0.741 0.836 - - - 0.954 0.800 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
39. myt1b ENSDARG00000102879 5411 3.325 0.737 0.817 - - - 0.903 0.868 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
40. CABZ01070258.1 ENSDARG00000105687 3643 3.312 0.787 0.700 - 0.985 - - 0.840 - -
41. BX957337.1 BX957337.1 1685 3.308 0.709 0.764 - - - 0.959 0.876 - -
42. MAP6 MAP6 643 3.302 0.741 0.806 - - - 0.848 0.907 - -
43. upf3a ENSDARG00000069297, ENSDARG00000111067 196 3.272 0.786 0.731 - - - 0.847 0.908 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
44. MCTP1 MCTP1 219 3.267 0.770 0.826 - - - 0.911 0.760 - -
45. scrt2 ENSDARG00000056175 4331 3.25 0.794 0.824 - - - 0.924 0.708 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
46. rtn1b ENSDARG00000021143 1682 3.204 0.735 0.730 - - - 0.942 0.797 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
47. rap2ip rap2ip 681 3.197 0.728 0.726 - - - 0.887 0.856 - -
48. rbfox3 rbfox3 1443 3.197 0.809 0.779 - - - 0.848 0.761 - -
49. sh3gl2 sh3gl2 1305 3.193 0.826 0.704 - - - 0.921 0.742 - -
50. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 3.172 0.717 0.839 - - - 0.899 0.717 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
51. CHL1 CHL1 1553 3.163 0.732 0.931 - - - 0.790 0.710 - -
52. hmgb3a ENSDARG00000056725 15668 3.156 0.757 - - 0.799 - 0.832 0.768 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
53. lgi1a ENSDARG00000020493 1218 3.116 0.758 0.719 - - - 0.802 0.837 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
54. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 3.093 - - 0.708 - - 0.750 0.858 - 0.777 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
55. adcyap1b ENSDARG00000027740 1539 2.761 0.883 - - - - 0.959 0.919 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
56. nmnat2 ENSDARG00000004580 370 2.75 0.887 - - - - 0.920 0.943 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
57. st18 663 2.694 - 0.858 - - - 0.943 0.893 - - suppression of tumorigenicity 18, zinc finger
58. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.691 0.903 - - - - 0.963 0.825 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
59. si:ch73-21g5.7 ENSDARG00000093156 9412 2.68 - 0.903 - - - 0.909 0.868 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
60. Sep-03 Sep-03 1124 2.667 0.787 - - - - 0.951 0.929 - -
61. lhx5 ENSDARG00000057936 785 2.652 0.886 - - - - 0.951 0.815 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
62. celf3a ENSDARG00000034668 2432 2.651 - 0.767 - 0.988 - 0.896 - - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
63. stxbp1a ENSDARG00000001994 5154 2.648 - 0.844 - - - 0.945 0.859 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
64. nadl1.1 1200 2.634 - 0.893 - - - 0.851 0.890 - - neural adhesion molecule L1.1, transcript variant X1
65. rims2b ENSDARG00000102690 275 2.631 0.845 - - - - 0.881 0.905 - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
66. SNAP91 ENSDARG00000098809 556 2.625 - 0.891 - - - 0.931 0.803 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
67. mllt11 ENSDARG00000071026 2518 2.625 0.791 - - - - 0.944 0.890 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
68. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.624 0.948 - - - - 0.889 0.787 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
69. lrrc4.1 ENSDARG00000069402 323 2.623 - 0.829 - - - 0.905 0.889 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
70. tuba1c ENSDARG00000055216 8384 2.622 0.804 - - - - 0.952 0.866 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
71. sv2bb ENSDARG00000060711 196 2.618 0.862 0.879 - - - - 0.877 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
72. her15.2 her15.2 1701 2.616 - 0.831 - - - 0.863 0.922 - -
73. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.609 0.875 - - - - 0.950 0.784 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
74. nes ENSDARG00000088805 2710 2.606 - 0.918 - - - 0.804 0.884 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
75. necap1 ENSDARG00000020798 612 2.606 0.883 - - - - 0.903 0.820 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
76. stmn1b ENSDARG00000033655 9491 2.601 0.828 - - - - 0.931 0.842 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
77. gng3 ENSDARG00000009553 2530 2.6 0.845 0.855 - - - - 0.900 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
78. dpysl3 ENSDARG00000002587 4381 2.598 0.858 - - - - 0.880 0.860 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
79. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.595 - 0.868 - - - 0.909 0.818 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
80. ZFHX3 ENSDARG00000103057 7759 2.591 0.859 - - - - 0.913 0.819 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
81. zic5 ENSDARG00000016022 1034 2.59 0.870 - - - - 0.809 0.911 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
82. scn2b ENSDARG00000101713 796 2.587 0.869 0.848 - - - - 0.870 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
83. vsnl1a ENSDARG00000023228 1584 2.587 - 0.899 - - - 0.980 0.708 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
84. CLIP3 ENSDARG00000054456 734 2.585 - 0.797 - - - 0.832 0.956 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
85. lrrtm1 ENSDARG00000052713 1041 2.585 0.742 - - 0.995 - - 0.848 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
86. eno2 ENSDARG00000014287 2162 2.581 0.796 - - - - 0.901 0.884 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
87. stmn2b ENSDARG00000070537 1586 2.576 0.803 0.808 - - - 0.965 - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
88. prrt1 ENSDARG00000062208 368 2.575 0.807 - - - - 0.843 0.925 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
89. ppp3ca ENSDARG00000004988 615 2.575 0.866 - - - - 0.931 0.778 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
90. C7H4orf48 C7H4orf48 1455 2.574 0.772 - - - - 0.959 0.843 - -
91. slc18a3a ENSDARG00000006356 1285 2.571 - 0.854 - - - 0.842 0.875 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
92. AP3B2 1874 2.567 - 0.920 - - - 0.920 0.727 - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
93. cdk5r1b ENSDARG00000045087 2075 2.562 0.895 - - - - 0.866 0.801 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
94. spock2 ENSDARG00000075393 791 2.562 0.832 - - - - 0.969 0.761 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
95. mir10d-1 mir10d-1 860 2.558 - 0.849 - - - 0.912 0.797 - -
96. si:dkey-25e11.10 si:dkey-25e11.10 955 2.557 0.771 - - - - 0.872 0.914 - -
97. cldn5a ENSDARG00000043716 3865 2.548 0.787 - - - - 0.831 0.930 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
98. rab3ab ENSDARG00000043835 1267 2.544 0.795 - - - - 0.937 0.812 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
99. TUBB2A TUBB2A 142 2.54 0.760 - - - - 0.916 0.864 - -
100. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.54 - - 0.735 - - 0.869 0.936 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]

There are 2120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA