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Results for zic3

Gene Name Gene ID Reads Annotation
zic3 ENSDARG00000071497 1448 zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]










Genes with expression patterns similar to zic3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zic3 ENSDARG00000071497 1448 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
2. mdkb ENSDARG00000020708 5393 4.026 0.797 - - - - 0.919 0.739 0.773 0.798 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
3. zic5 ENSDARG00000016022 1034 3.206 0.791 - 0.761 - - 0.880 0.774 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
4. slc6a1b ENSDARG00000039647 1301 2.806 - 0.978 - - - 0.972 0.856 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
5. atpv0e2 ENSDARG00000059057 585 2.686 0.850 - - - - 0.990 0.846 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
6. pnoca ENSDARG00000025024 467 2.618 0.796 0.882 - - - 0.940 - - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
7. atp2b3b ENSDARG00000023445 1424 2.608 0.837 - - - - 0.884 0.887 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
8. pknox2 ENSDARG00000055349 784 2.606 0.843 - - - - 0.929 0.834 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
9. cbln1 ENSDARG00000057296 165 2.563 0.701 - - - - 0.996 0.866 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
10. TRPC4_1 TRPC4_1 212 2.556 0.711 - - - - 0.984 0.861 - -
11. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.551 0.773 - - - - 0.874 0.904 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
12. PPFIA3 ENSDARG00000077053 310 2.542 0.740 - - - - 0.981 0.821 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
13. dtnbb ENSDARG00000013020 280 2.539 0.713 - - - - 0.978 0.848 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
14. cers6 ENSDARG00000053583 247 2.521 0.810 - - - - 0.838 0.873 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
15. trim2b ENSDARG00000076174 250 2.521 - 0.773 - - - 0.919 0.829 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
16. lhx5 ENSDARG00000057936 785 2.52 0.845 - - - - 0.857 0.818 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
17. MAP6 MAP6 643 2.517 0.730 - - - - 0.897 0.890 - -
18. nptx1l ENSDARG00000074671 569 2.498 0.785 - - - - 0.911 0.802 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
19. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.495 0.843 - - - - 0.944 0.708 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
20. dpysl4 ENSDARG00000103490 534 2.486 0.776 - - - - 0.962 0.748 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
21. TUBB2A TUBB2A 142 2.477 0.749 - - - - 0.881 0.847 - -
22. C7H4orf48 C7H4orf48 1455 2.477 0.741 - - - - 0.860 0.876 - -
23. eno2 ENSDARG00000014287 2162 2.474 0.777 - - - - 0.871 0.826 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
24. zic4 ENSDARG00000031307 1228 2.472 0.784 - - - - 0.808 0.880 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
25. stmn1b ENSDARG00000033655 9491 2.461 0.761 - - - - 0.937 0.763 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
26. cacna2d3 ENSDARG00000078760 211 2.459 0.823 - - - - 0.869 0.767 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
27. stmn2a ENSDARG00000033234 2272 2.445 0.839 - - - - 0.897 0.709 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
28. notch1b ENSDARG00000052094 7874 2.444 - - - - - 0.935 0.739 0.770 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
29. SV2B SV2B 208 2.422 0.844 - - - - 0.833 0.745 - -
30. plp1a ENSDARG00000103732 3544 2.422 0.723 - - - - 0.866 0.833 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
31. zic1 ENSDARG00000015567 2520 2.402 0.781 - - - - 0.910 0.711 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
32. ZFHX3 ENSDARG00000103057 7759 2.395 0.762 0.914 - - - - 0.719 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
33. adcyap1b ENSDARG00000027740 1539 2.382 0.852 - - - - 0.726 0.804 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
34. nrn1a ENSDARG00000071860 1311 2.381 0.756 - - - - 0.870 0.755 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
35. nmnat2 ENSDARG00000004580 370 2.377 0.834 - - - - 0.732 0.811 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
36. pcdh1gc5 ENSDARG00000104826 10052 2.375 0.713 - - - - 0.800 0.862 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
37. TUBB8P7_1 TUBB8P7_1 2722 2.371 0.790 - - - - 0.706 0.875 - -
38. syn1 ENSDARG00000060368, ENSDARG00000111164 397 2.366 0.776 - - - - 0.839 0.751 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
39. mllt11 ENSDARG00000071026 2518 2.359 0.804 - - - - 0.746 0.809 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
40. CT030046.1 CT030046.1 190 2.359 0.707 - - - - 0.927 0.725 - -
41. necap1 ENSDARG00000020798 612 2.348 0.751 - - - - 0.768 0.829 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
42. gap43 ENSDARG00000099744 4114 2.346 0.839 - - - - 0.763 0.744 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
43. gabra5 ENSDARG00000070730 156 2.322 0.795 - - - - 0.767 0.760 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
44. snap25a ENSDARG00000020609 4537 2.311 0.831 - - - - 0.719 0.761 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
45. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.31 0.743 - - - - 0.831 0.736 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
46. slc1a3a ENSDARG00000104431 9888 2.304 0.791 - - - - 0.762 0.751 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
47. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.282 0.777 - - - - 0.773 0.732 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
48. dpysl5a ENSDARG00000011141 1827 2.262 - - - - - 0.815 0.711 0.736 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
49. tuba1c ENSDARG00000055216 8384 2.243 0.746 - - - - 0.709 0.788 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
50. slc29a1a ENSDARG00000101289 2074 2.231 - - - - - 0.767 - 0.728 0.736 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
51. rab3ab ENSDARG00000043835 1267 2.223 0.705 - - - - 0.746 0.772 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
52. tmsb ENSDARG00000054911 6411 2.215 0.716 - - - - 0.740 0.759 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
53. kcnj1b ENSDARG00000002666 87 1.926 - 0.969 - - - - 0.957 - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
54. lgi3 ENSDARG00000041358 46 1.912 - - - - - 0.968 0.944 - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
55. CR388231.1 ENSDARG00000098710 153 1.91 - - - - - 0.979 0.931 - -
56. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.906 - - - - - 0.958 0.948 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
57. KCNIP4 ENSDARG00000088100 86 1.898 - - - - - 0.988 0.910 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
58. UBL7 UBL7 197 1.888 - - - - - 0.919 0.969 - -
59. kcnn1a ENSDARG00000091306 95 1.878 - - - - - 0.958 0.920 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
60. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.873 - - - - - 0.965 0.908 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
61. st6gal1 ENSDARG00000044514 142 1.866 - - - - - 0.984 0.882 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
62. dpp6b ENSDARG00000024744 234 1.865 0.882 - - - - 0.983 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
63. syn2a ENSDARG00000045945 434 1.863 - - - - - 0.988 0.875 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
64. st8sia5 ENSDARG00000036584 529 1.863 - - - - - 0.962 0.901 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
65. AL929252.1 AL929252.1 81 1.863 - - - - - 0.921 0.942 - -
66. clstn2 ENSDARG00000060637 548 1.852 0.897 0.955 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
67. dnajc6 ENSDARG00000079891 438 1.847 - - - - - 0.949 0.898 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
68. tnika ENSDARG00000056218 728 1.84 - - - - - 0.966 0.874 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
69. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.838 - 0.969 - - - - 0.869 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
70. scn1lab ENSDARG00000062744 155 1.838 - - - - - 0.900 0.938 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
71. map7d2b ENSDARG00000045316 702 1.836 - 0.936 - - - - 0.900 - - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
72. her15.2 her15.2 1701 1.835 - - - - - 0.964 0.871 - -
73. ksr2 ENSDARG00000094526 134 1.833 - - - - - 0.989 0.844 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
74. TTBK1_1 TTBK1_1 132 1.831 - - - - - 0.956 0.875 - -
75. htr3a ENSDARG00000089212 51 1.829 0.834 - - - - 0.995 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
76. CLIP3 ENSDARG00000054456 734 1.827 - - - - - 0.986 0.841 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
77. kif3cb ENSDARG00000079500 935 1.827 - - - - - 0.966 0.861 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
78. pkib ENSDARG00000053110 527 1.826 - - - - - 0.971 0.855 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
79. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.826 0.840 - - - - 0.986 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
80. si:dkey-100n10.2 101 1.824 - - - - - 0.981 0.843 - - si:dkey-100n10.2
81. cacng8a ENSDARG00000020450 32 1.82 - - - - - 0.962 0.858 - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
82. hiat1b ENSDARG00000043055 757 1.813 - 0.876 - - - 0.937 - - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
83. si:dkey-245p14.4 ENSDARG00000070320 418 1.807 0.816 - - - - 0.991 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
84. nxph1 ENSDARG00000033447 182 1.806 - - - - - 0.990 0.816 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
85. GSG2 GSG2 1162 1.803 - 0.924 - - - 0.879 - - -
86. gpr144 gpr144 479 1.803 - - - - - 0.872 0.931 - -
87. DACT3_1 DACT3_1 1235 1.784 0.801 - - - - 0.983 - - -
88. sox2 ENSDARG00000070913 2763 1.784 - - - - - 0.975 0.809 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
89. GADD45G GADD45G 382 1.781 0.854 - - - - - 0.927 - -
90. kif18a ENSDARG00000008022 546 1.781 0.851 - - - - 0.930 - - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
91. nexmifb ENSDARG00000029296 416 1.781 - - - - - 0.962 0.819 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
92. TTYH1 ENSDARG00000076804 399 1.777 - - - - - 0.922 0.855 - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
93. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.771 0.783 - - - - 0.988 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
94. layna ENSDARG00000035169 515 1.771 - 0.949 - - - 0.822 - - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
95. rdh12 ENSDARG00000018069 396 1.77 - - - - - 0.934 0.836 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
96. SACS_1 SACS_1 234 1.762 - - - - - 0.854 0.908 - -
97. syt9a ENSDARG00000003994 298 1.762 0.805 - - - - 0.957 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
98. shisa7 shisa7 181 1.751 - - - - - 0.840 0.911 - -
99. EML6 250 1.751 - - - - - 0.859 0.892 - - echinoderm microtubule associated protein like 6
100. GRIN2B GRIN2B 140 1.75 0.780 - - - - 0.970 - - -

There are 2412 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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