Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for zic1

Gene Name Gene ID Reads Annotation
zic1 ENSDARG00000015567 2520 zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]










Genes with expression patterns similar to zic1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zic1 ENSDARG00000015567 2520 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
2. zic5 ENSDARG00000016022 1034 5.17 0.839 - - 0.891 - 0.848 0.980 0.901 0.711 zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
3. zic4 ENSDARG00000031307 1228 4.243 0.889 0.751 - - - 0.939 0.878 - 0.786 zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
4. si:ch73-21g5.7 ENSDARG00000093156 9412 4.221 0.708 0.781 0.901 - - 0.936 0.895 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
5. dpysl5a ENSDARG00000011141 1827 3.985 0.722 - 0.805 - - 0.909 0.812 0.737 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
6. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 3.834 0.762 - 0.744 - - 0.731 - 0.861 0.736 wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
7. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.542 0.938 0.763 - - - 0.965 0.876 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
8. rtn1b ENSDARG00000021143 1682 3.465 0.806 0.856 - - - 0.944 0.859 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
9. nrxn2a ENSDARG00000061454 291 3.451 0.903 - - - - 0.893 0.767 0.888 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
10. gap43 ENSDARG00000099744 4114 3.446 0.952 0.717 - - - 0.901 0.876 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
11. syt11a ENSDARG00000057913 1145 3.4 0.845 0.731 - - - 0.949 0.875 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
12. cacna2d3 ENSDARG00000078760 211 3.372 0.942 0.716 - - - 0.905 0.809 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
13. TUBB8P7_1 TUBB8P7_1 2722 3.36 0.918 0.791 - - - 0.879 0.772 - -
14. snap25a ENSDARG00000020609 4537 3.346 0.942 0.765 - - - 0.877 0.762 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
15. MAP6 MAP6 643 3.336 0.909 0.734 - - - 0.872 0.821 - -
16. amph ENSDARG00000007663 599 3.33 0.938 0.708 - - - 0.888 0.796 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
17. ppp3ca ENSDARG00000004988 615 3.31 0.830 - - - - 0.941 0.764 0.775 - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
18. zic2a ENSDARG00000015554 2860 3.308 0.893 - - - - 0.730 0.883 - 0.802 zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
19. ptprna ENSDARG00000058646 1327 3.288 - - 0.833 - - 0.730 0.915 0.810 - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
20. nptx1l ENSDARG00000074671 569 3.283 0.761 0.787 - - - 0.930 0.805 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
21. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.278 0.753 - 0.733 - - 0.895 0.897 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
22. rbfox3 rbfox3 1443 3.275 0.916 0.828 - - - 0.733 0.798 - -
23. scn8aa ENSDARG00000005775 792 3.272 0.896 0.713 - - - 0.838 0.825 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
24. nova1 ENSDARG00000020178 4129 3.261 - 0.773 - - - 0.873 0.797 0.818 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
25. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 3.254 0.815 - 0.764 - - 0.923 0.752 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
26. mex3b ENSDARG00000058369 1867 3.252 - - 0.768 - 0.784 0.851 0.849 - - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
27. Sep-03 Sep-03 1124 3.246 0.772 - 0.816 - - 0.844 0.814 - -
28. stx1b ENSDARG00000000503 2724 3.241 0.878 0.725 - - - 0.840 0.798 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
29. ZFHX3 ENSDARG00000103057 7759 3.24 0.805 - 0.761 - - 0.834 0.840 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
30. myt1b ENSDARG00000102879 5411 3.238 0.717 0.714 - - - 0.869 0.938 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
31. pcsk1nl ENSDARG00000076170 1232 3.228 0.758 0.717 - - - 0.933 0.820 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
32. nova2 ENSDARG00000017673 7685 3.218 0.799 0.739 - - - 0.762 0.918 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
33. scn2b ENSDARG00000101713 796 3.209 0.843 0.708 - - - - 0.808 0.850 - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
34. igsf9a ENSDARG00000075864 1870 3.199 0.828 - 0.763 - - 0.906 0.702 - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
35. tuba2 ENSDARG00000045014 1490 3.194 0.762 0.724 - - - 0.960 0.748 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
36. her4.1 ENSDARG00000056732 1264 3.176 - - 0.745 - 0.721 0.858 0.852 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
37. gsx1 ENSDARG00000035735 1243 3.17 0.750 - 0.885 - - 0.723 0.812 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
38. sh3gl2 sh3gl2 1305 3.136 0.791 0.742 - - - 0.882 0.721 - -
39. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 3.123 0.762 - - - - 0.876 0.776 0.709 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
40. plagx ENSDARG00000036855 3768 3.122 0.778 - - - 0.770 - 0.808 0.766 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
41. hmgb3a ENSDARG00000056725 15668 3.113 0.807 - - - 0.753 0.778 0.775 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
42. nes ENSDARG00000088805 2710 3.083 0.767 0.705 - - 0.712 - 0.899 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
43. sprb ENSDARG00000058553 1694 3.082 0.708 0.777 - - - 0.892 0.705 - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
44. scrt1a ENSDARG00000100821 2687 3.053 0.796 - 0.772 - 0.715 0.770 - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
45. mdkb ENSDARG00000020708 5393 2.812 0.922 - 0.927 - - 0.963 - - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
46. slc1a3a ENSDARG00000104431 9888 2.804 0.919 - - - - 0.920 0.965 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
47. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.771 0.912 - - - - 0.888 0.971 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
48. adcyap1b ENSDARG00000027740 1539 2.771 0.948 - - - - 0.882 0.941 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
49. stmn1b ENSDARG00000033655 9491 2.747 0.913 - - - - 0.963 0.871 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
50. nadl1.2 695 2.746 0.899 - - - - 0.896 0.951 - - neural adhesion molecule L1.2, transcript variant X1
51. syt9a ENSDARG00000003994 298 2.731 0.880 - - - - 0.946 - 0.905 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
52. nmnat2 ENSDARG00000004580 370 2.73 0.879 - - - - 0.879 0.972 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
53. eno2 ENSDARG00000014287 2162 2.717 0.881 - - - - 0.923 0.913 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
54. nrn1a ENSDARG00000071860 1311 2.703 0.870 - - - - 0.956 0.877 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
55. stmn2a ENSDARG00000033234 2272 2.7 0.939 - - - - 0.973 0.788 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
56. mllt11 ENSDARG00000071026 2518 2.693 0.913 - - - - 0.904 0.876 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
57. atp2b3b ENSDARG00000023445 1424 2.692 0.890 - - - - 0.938 0.864 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
58. plp1a ENSDARG00000103732 3544 2.668 0.872 - - - - 0.916 0.880 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
59. spock2 ENSDARG00000075393 791 2.662 0.864 - - - - 0.959 0.839 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
60. mapk12b ENSDARG00000006409 2246 2.66 0.840 - - - - 0.948 0.872 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
61. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.654 0.935 - - - - 0.886 0.833 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
62. CACFD1 ENSDARG00000090818 1298 2.648 - - - - - 0.946 0.844 0.858 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
63. cldn5a ENSDARG00000043716 3865 2.648 - - - - - 0.840 0.915 0.893 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
64. atpv0e2 ENSDARG00000059057 585 2.642 0.845 - - - - 0.888 0.909 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
65. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.636 0.844 - - - - 0.947 0.845 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
66. her15.2 her15.2 1701 2.635 - - - - - 0.953 0.937 0.745 -
67. CABZ01088330.1 CABZ01088330.1 679 2.629 - - - - - 0.878 0.969 0.782 -
68. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.624 0.819 - - - - 0.901 0.904 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
69. pcdh1gc5 ENSDARG00000104826 10052 2.614 0.803 - - - - 0.924 0.887 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
70. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.613 - - 0.805 - - 0.941 0.867 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
71. scg2b ENSDARG00000038574 345 2.607 - - - - - 0.933 0.797 0.877 - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
72. sox2 ENSDARG00000070913 2763 2.606 0.816 - - - - 0.897 0.893 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
73. TUSC5 TUSC5 1436 2.602 0.931 - - - - 0.947 0.724 - -
74. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.599 - - - - - 0.948 0.948 - 0.703 LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
75. notch1b ENSDARG00000052094 7874 2.597 - - - - - 0.959 0.846 0.792 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
76. pkib ENSDARG00000053110 527 2.597 - - - - - 0.921 0.829 0.847 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
77. tuba1c ENSDARG00000055216 8384 2.596 0.881 - - - - 0.878 0.837 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
78. stap2a ENSDARG00000092810 591 2.592 - - - - - 0.869 0.822 0.901 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
79. prrt1 ENSDARG00000062208 368 2.583 0.927 - - - - 0.790 0.866 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
80. kif1ab ENSDARG00000062024 794 2.581 - 0.848 - - - 0.927 0.806 - - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
81. tnika ENSDARG00000056218 728 2.578 0.766 - - - - 0.934 0.878 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
82. add2 ENSDARG00000074581 1402 2.575 0.797 - - - - 0.853 0.925 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
83. CLIP3 ENSDARG00000054456 734 2.575 0.736 - - - - 0.927 0.912 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
84. adarb1a ENSDARG00000041609 476 2.575 0.791 - - - - 0.933 0.851 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
85. calb1 ENSDARG00000031598 252 2.568 0.874 - - - - 0.787 0.907 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
86. slc1a2b ENSDARG00000102453 3136 2.567 0.924 - - - - 0.850 0.793 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
87. stmn2b ENSDARG00000070537 1586 2.561 0.897 - - - - 0.876 0.788 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
88. MAP1A MAP1A 847 2.553 0.894 - - - - 0.904 0.755 - -
89. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.551 - - - - - 0.802 0.884 0.865 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
90. sez6l2 ENSDARG00000076052 360 2.548 0.803 - - - - 0.958 0.787 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
91. rab3ab ENSDARG00000043835 1267 2.546 0.862 - - - - 0.889 0.795 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
92. olfm1b ENSDARG00000014053 1392 2.545 0.861 - - - - 0.913 0.771 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
93. ttll7 ENSDARG00000062973 519 2.543 0.721 - - - - 0.940 - 0.882 - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
94. slc32a1 ENSDARG00000059775 1092 2.54 0.901 - - - - 0.871 0.768 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
95. cers6 ENSDARG00000053583 247 2.538 0.779 - - - - 0.922 0.837 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
96. her2 ENSDARG00000038205 3219 2.536 0.862 - - - - - 0.891 - 0.783 hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
97. atp6v0cb ENSDARG00000036577 3472 2.536 0.802 - - - - 0.845 0.889 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
98. CT030046.1 CT030046.1 190 2.531 0.908 - - - - 0.921 0.702 - -
99. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.529 0.802 - - - - 0.887 0.840 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
100. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 2.529 0.787 - 0.837 - - 0.905 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]

There are 2519 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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