Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:56493

Gene Name Gene ID Reads Annotation
zgc:56493 ENSDARG00000031435 33407 zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]










Genes with expression patterns similar to zgc:56493

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:56493 ENSDARG00000031435 33407 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
2. UBC ENSDARG00000102632 39051 2.513 - - - 0.901 0.739 - 0.873 - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
3. rer1 ENSDARG00000012747 6939 2.331 - 0.779 - - - 0.781 0.771 - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
4. rsl24d1 ENSDARG00000040439 13537 2.301 0.750 - - - - 0.707 0.844 - - ribosomal L24 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1925]
5. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.281 0.716 - - - - - - 0.738 0.827 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
6. emc3 ENSDARG00000020607 3406 2.259 - - - - - 0.815 0.743 - 0.701 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
7. txnrd1 11401 2.235 - - - - - 0.793 0.732 - 0.710 thioredoxin reductase 1
8. ywhabb ENSDARG00000075758 23104 1.909 - - - 0.978 - - 0.931 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
9. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.807 - - - 0.979 - 0.828 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
10. col18a1 col18a1 20555 1.737 - - - 0.957 - - 0.780 - -
11. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.721 - - - 0.972 - 0.749 - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
12. ywhabl ENSDARG00000040287 39045 1.713 - - - - - 0.797 0.916 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
13. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.708 - - - 0.972 - - - - 0.736 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
14. txndc5 ENSDARG00000009342 5387 1.702 - - - 0.971 - - 0.731 - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
15. brd4 ENSDARG00000078904 5367 1.7 - - - - - 0.841 0.859 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
16. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.685 - - - 0.979 - - 0.706 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
17. spcs1 ENSDARG00000059298 5327 1.684 - - - - - 0.888 0.796 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
18. tuba1c ENSDARG00000055216 8384 1.677 - - - 0.974 - - - - 0.703 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
19. EIF1B ENSDARG00000029445 5034 1.668 - - - 0.967 - - - - 0.701 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
20. mcm2 ENSDARG00000102798 8148 1.659 - - - 0.869 - - 0.790 - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
21. nufip2 ENSDARG00000069066 3965 1.655 - - - - - 0.876 0.779 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
22. hif1al ENSDARG00000100826 18627 1.655 - - - - - 0.856 0.799 - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
23. prkar1aa ENSDARG00000076128 6565 1.647 - - - - - 0.810 0.837 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
24. ubc ENSDARG00000102632 36050 1.646 - - 0.759 - - 0.887 - - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
25. anp32a ENSDARG00000006487 28249 1.643 - - - - - - 0.827 - 0.816 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
26. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.629 - - - - - 0.836 0.793 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
27. s100v1 ENSDARG00000070427 6633 1.628 - 0.759 - - - 0.869 - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
28. tet3 ENSDARG00000062646 6672 1.623 - - - - - 0.831 0.792 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
29. adam10a ENSDARG00000053468 9308 1.62 - - - - - 0.794 0.826 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
30. vta1 ENSDARG00000013732 6072 1.61 - - - - - 0.865 0.745 - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
31. myeov2 3351 1.608 - - - - - 0.794 0.814 - - myeloma overexpressed 2
32. cnn2 ENSDARG00000035858 18201 1.607 - - - - - 0.738 0.869 - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
33. bcar1 ENSDARG00000056525 6563 1.607 - - - - - 0.865 0.742 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
34. vps25 ENSDARG00000059079 3747 1.598 - - - - - 0.801 0.797 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
35. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.597 - 0.771 - - - - - - 0.826 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
36. fkbp3 ENSDARG00000098059 5428 1.595 - - - - - 0.831 0.764 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
37. stt3b ENSDARG00000001890 1836 1.591 - - - - - 0.852 0.739 - - STT3B, subunit of the oligosaccharyltransferase complex (catalytic) [Source:ZFIN;Acc:ZDB-GENE-030131-2638]
38. itgb4 ENSDARG00000028507 2568 1.58 - - - - - 0.807 0.773 - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
39. fbl ENSDARG00000053912 5891 1.578 - 0.792 - - - 0.786 - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
40. ywhaz ENSDARG00000032575 15257 1.577 - - - 0.796 - - 0.781 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
41. nfe2l3 ENSDARG00000019810 3682 1.576 - 0.791 - - - 0.785 - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
42. TEAD3 TEAD3 8614 1.574 - - - - - 0.763 0.811 - -
43. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.573 - 0.790 - - - 0.783 - - - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
44. khsrp ENSDARG00000026489 15738 1.571 0.731 - - - - - - - 0.840 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
45. rpl19 ENSDARG00000013307 122192 1.569 - 0.700 - 0.869 - - - - - ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
46. trpc4apa ENSDARG00000018840 2543 1.567 - - - - - 0.804 0.763 - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
47. cldnb ENSDARG00000009544 6036 1.567 - - - - - 0.833 0.734 - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
48. TCEB3 2429 1.566 - - - - - 0.811 0.755 - - transcription elongation factor B (SIII), polypeptide 3
49. slc39a7 ENSDARG00000104451 6368 1.565 - - - - - 0.846 0.719 - - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
50. PHTF1 PHTF1 1029 1.564 - - - - - 0.830 0.734 - -
51. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.562 - - - - - 0.822 0.740 - - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
52. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.558 - - - - - 0.808 - - 0.750 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
53. gabarapl2 ENSDARG00000027200 5120 1.557 - - - - - 0.851 0.706 - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
54. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 1.556 - 0.776 - - - 0.780 - - - Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
55. me3 ENSDARG00000002305 3305 1.553 - 0.788 - - - 0.765 - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
56. zgc:56530 zgc:56530 6300 1.552 - - - - - 0.830 0.722 - -
57. plscr3b ENSDARG00000069432 8500 1.552 - 0.785 - - - - 0.767 - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
58. bckdk ENSDARG00000016904 3775 1.551 - - - - - 0.822 0.729 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
59. eif3f ENSDARG00000077533 24387 1.55 - - - - - - 0.788 - 0.762 eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
60. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.549 - - - - - - 0.804 - 0.745 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
61. ATOX1 ENSDARG00000087693 4016 1.548 - - - - - 0.796 0.752 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
62. MATR3 MATR3 3962 1.547 - - - - - - 0.812 - 0.735
63. ppl ENSDARG00000101043 9196 1.546 - - - - - 0.823 0.723 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
64. MRPL42 ENSDARG00000079391 1403 1.542 - 0.788 - - - 0.754 - - - mitochondrial ribosomal protein L42 [Source:ZFIN;Acc:ZDB-GENE-101014-1]
65. adam17a ENSDARG00000043213 1305 1.54 - - - - - 0.813 0.727 - - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
66. serinc2 ENSDARG00000056532 1406 1.538 - - - - - 0.753 0.785 - - serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
67. rac2 ENSDARG00000038010 5837 1.538 - - - - - 0.820 0.718 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
68. shc1 ENSDARG00000075437 3278 1.532 - - - - - 0.804 0.728 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
69. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.531 - - - - - 0.826 - - 0.705 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
70. sarnp ENSDARG00000059357 4768 1.529 - - - - - - 0.750 - 0.779 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
71. copa ENSDARG00000004173 3977 1.529 - - - - - 0.745 0.784 - - coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
72. HIPK1_1 HIPK1_1 8096 1.525 - - - - - 0.788 0.737 - -
73. LEPROTL1 ENSDARG00000104871 3019 1.525 - - - - - - 0.782 - 0.743 leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
74. rpl30 ENSDARG00000035871, ENSDARG00000109253 56661 1.523 - - - - 0.794 - 0.729 - - ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
75. pef1 ENSDARG00000023989 3013 1.522 - - - - - 0.778 0.744 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
76. lsm14aa ENSDARG00000006600 2298 1.521 - - - - - 0.762 0.759 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
77. faf1 ENSDARG00000022418 2922 1.521 - - - - - 0.785 0.736 - - Fas (TNFRSF6) associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2863]
78. lmnb2 ENSDARG00000101624 11304 1.519 - - - - - - 0.714 - 0.805 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
79. cdc34b ENSDARG00000012627 3879 1.516 - - - - - 0.802 - - 0.714 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
80. nrm ENSDARG00000063690 1371 1.516 - - - - - 0.773 0.743 - - nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
81. ufc1 ENSDARG00000022340 2618 1.515 - - - - - 0.795 0.720 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
82. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.514 - - - - - 0.783 0.731 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
83. vimp 4034 1.513 - - - - - 0.753 0.760 - - VCP-interacting membrane selenoprotein
84. znf706 ENSDARG00000056307 12518 1.509 - 0.767 - - - - 0.742 - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
85. srsf3b ENSDARG00000059360 14888 1.509 - - - - - - 0.754 - 0.755 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
86. efna1a ENSDARG00000030326 1692 1.507 - - - - - 0.749 0.758 - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
87. cnot6 cnot6 7029 1.505 - 0.787 - - - 0.718 - - -
88. grina grina 4656 1.503 - - - - - 0.801 0.702 - -
89. lima1 lima1 4760 1.502 - - - - - - 0.762 - 0.740
90. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.501 0.732 - - - - - 0.769 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
91. si:ch211-87l2.1 si:ch211-87l2.1 2403 1.501 - - - - - 0.765 0.736 - -
92. btbd10b ENSDARG00000020252 7251 1.498 - - - - - 0.706 0.792 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
93. cast ENSDARG00000058693 15565 1.497 - - - - - 0.777 0.720 - - calpastatin [Source:ZFIN;Acc:ZDB-GENE-050810-2]
94. stau2 ENSDARG00000026801, ENSDARG00000112268 5161 1.497 - - - - - 0.768 0.729 - - staufen double-stranded RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-687]
95. arf1 ENSDARG00000009484 5034 1.497 - - - - - 0.735 0.762 - - ADP-ribosylation factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-5]
96. CABZ01081490.1 ENSDARG00000111653 11892 1.493 - 0.789 - - - - 0.704 - -
97. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.493 - - - - - 0.758 0.735 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
98. HNRNPAB HNRNPAB 22267 1.487 - 0.723 - - - - - - 0.764
99. CU862021.1 CU862021.1 5925 1.486 - - - - - 0.730 0.756 - -
100. si:ch211-264e16.1 ENSDARG00000068947 1358 1.48 - - - - - 0.767 0.713 - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]

There are 1302 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA