Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for zgc:55733

Gene Name Gene ID Reads Annotation
zgc:55733 ENSDARG00000103845 1550 zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]










Genes with expression patterns similar to zgc:55733

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:55733 ENSDARG00000103845 1550 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
2. lrrc40 ENSDARG00000017708 1156 2.508 0.951 - - - - - 0.787 0.770 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
3. top2b ENSDARG00000034195 3715 2.44 - 0.838 - - - - 0.891 0.711 - DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
4. znf131 ENSDARG00000068400, ENSDARG00000110506 920 2.388 - 0.797 - - - - 0.763 0.828 - zinc finger protein 131 [Source:ZFIN;Acc:ZDB-GENE-040426-1563]
5. ZNF618 ENSDARG00000071469 2347 2.297 - - - 0.757 - - 0.819 0.721 - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
6. plagx ENSDARG00000036855 3768 2.254 - - - 0.713 - - 0.809 0.732 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
7. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 2.177 - - - - - 0.729 0.714 0.734 - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
8. vps4a ENSDARG00000030114 933 1.868 0.990 - - - - - 0.878 - - vacuolar protein sorting 4a homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-388]
9. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.828 0.978 - - - - - 0.850 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
10. TOM1L2 ENSDARG00000056394 793 1.814 0.990 - - - - - - 0.824 - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
11. ahcyl2 ENSDARG00000039343 1210 1.786 0.991 - - - - - 0.795 - - adenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
12. ctbp2 ctbp2 3255 1.775 0.929 - - - - - 0.846 - -
13. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.774 0.962 - - - - - 0.812 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
14. IRF2 ENSDARG00000040465 453 1.771 0.991 - - - - 0.780 - - - interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]
15. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.752 0.980 - - - - - - 0.772 - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
16. gclm ENSDARG00000018953 1712 1.745 0.973 - - - - - - 0.772 - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
17. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.745 0.993 - - - - - - 0.752 - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
18. epn2 ENSDARG00000008377 5458 1.732 0.980 - - 0.752 - - - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
19. pelo ENSDARG00000055477 1927 1.73 0.947 - - - - - - 0.783 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
20. hif1an ENSDARG00000031915 2098 1.728 - - - - - - 0.837 0.891 - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
21. pygmb ENSDARG00000013317 5454 1.721 0.967 - - - - - 0.754 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
22. ube2i ube2i 13024 1.72 0.884 - - - - - 0.836 - -
23. ppig ENSDARG00000044431 3427 1.719 0.982 0.737 - - - - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
24. usp4 ENSDARG00000014770 1684 1.715 0.992 - - - - - 0.723 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
25. emc9 ENSDARG00000034633 686 1.715 - - - - - - 0.826 0.889 - ER membrane protein complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-040426-693]
26. ubac1 ENSDARG00000059722, ENSDARG00000113910 1375 1.708 0.989 - - - - 0.719 - - - UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]
27. dcaf7 ENSDARG00000054355 3517 1.701 0.984 - - - - - 0.717 - - ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
28. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.698 - - - - - - 0.835 0.863 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
29. farsa ENSDARG00000098825 2813 1.695 0.984 - - - - - 0.711 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
30. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.692 - - - - - - 0.832 0.860 - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
31. e2f7 ENSDARG00000008986 1439 1.688 - - - 0.811 - - - 0.877 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
32. fam50a ENSDARG00000024895 3020 1.688 0.966 - - - - - 0.722 - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
33. atf7ip ENSDARG00000069619 5495 1.686 - - - - - - 0.836 0.850 - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
34. ck2a1 ck2a1 3749 1.678 0.973 - - - - - 0.705 - -
35. map1lc3b ENSDARG00000101127 3958 1.677 0.975 - - - - - 0.702 - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
36. lsm14ab ENSDARG00000100553 3837 1.669 - - - - - - 0.823 0.846 - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
37. ddx19 ENSDARG00000005699 4602 1.665 - - - - - - 0.822 0.843 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
38. mybphb ENSDARG00000003081 5208 1.662 0.934 - - - - - 0.728 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
39. fzd3a ENSDARG00000021664 1958 1.66 - - - 0.879 - - 0.781 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
40. apex1 ENSDARG00000045843 6345 1.651 - - - - - - 0.891 0.760 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
41. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.65 - - - - - - 0.835 0.815 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
42. kdm1a ENSDARG00000060679 6152 1.646 - - - - - - 0.762 0.884 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
43. PPP1R8 PPP1R8 1897 1.646 - - - - - - 0.741 0.905 -
44. nol11 ENSDARG00000026767 2528 1.646 - - - - - - 0.782 0.864 - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
45. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 1.645 - 0.797 - - - - - 0.848 - nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
46. lypla2 ENSDARG00000053656 8971 1.642 - - - 0.840 - - 0.802 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
47. g2e3 ENSDARG00000001313 1485 1.632 - - - - - - 0.771 0.861 - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
48. lmnb2 ENSDARG00000101624 11304 1.625 0.845 - - - - - - 0.780 - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
49. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.618 - - - - - - 0.755 0.863 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
50. pfdn4 ENSDARG00000061228 8266 1.615 0.902 - - - - - 0.713 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
51. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.608 - - - 0.732 - - - 0.876 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
52. dixdc1a ENSDARG00000025302 716 1.607 - - - - - - 0.713 0.894 - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
53. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.605 - - - 0.748 - - 0.857 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
54. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.599 - - - 0.723 - - 0.876 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
55. cdc42ep4a ENSDARG00000101457, ENSDARG00000114480 1226 1.594 - - - 0.759 - - - 0.835 - CDC42 effector protein (Rho GTPase binding) 4a [Source:ZFIN;Acc:ZDB-GENE-040704-22]
56. zswim5 ENSDARG00000055900 4243 1.587 - - - - - - 0.817 0.770 - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
57. snrpb ENSDARG00000011125 11729 1.585 0.839 - - 0.746 - - - - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
58. UBAP2 UBAP2 3818 1.583 - - - - - 0.795 0.788 - -
59. gstm gstm 4064 1.58 - - - - - - 0.793 0.787 -
60. dnajc5ga ENSDARG00000041896 1478 1.579 - - - - - - 0.723 0.856 - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
61. mcm7 ENSDARG00000101180 12417 1.576 - - - - - - 0.788 0.788 - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
62. trps1 ENSDARG00000104082 918 1.575 - - - - - - 0.732 0.843 - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
63. CACFD1 ENSDARG00000090818 1298 1.568 - - - - - - 0.761 0.807 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
64. hnrnpub ENSDARG00000004735 16496 1.566 - - - 0.772 - - 0.794 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
65. actr1 ENSDARG00000011611 3879 1.566 - - - - - - 0.823 0.743 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
66. foxo3b ENSDARG00000042904 5046 1.566 - - - - - 0.734 0.832 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
67. ZNF576 ZNF576 1447 1.562 - 0.737 - - - - - 0.825 -
68. RNF38 ENSDARG00000062055 3901 1.561 - - - 0.759 - - 0.802 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
69. h2afx ENSDARG00000029406 2116 1.558 - 0.838 - - - - 0.720 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
70. pfn2l ENSDARG00000012682 21690 1.551 - - - 0.770 - - 0.781 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
71. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.548 - - - 0.762 - - 0.786 - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
72. POLE4 ENSDARG00000013016 848 1.548 - - - - - - 0.755 0.793 - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
73. cspg5a ENSDARG00000069981 1699 1.547 - - - 0.722 - - - 0.825 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
74. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.547 - - - - - 0.715 - 0.832 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
75. uck2a ENSDARG00000006074 1554 1.546 - - - - - - 0.723 0.823 - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
76. dnajc11 1939 1.541 - - - - - 0.822 - 0.719 - DnaJ heat shock protein family (Hsp40) member C11
77. ogfr ENSDARG00000037837 1001 1.541 - - - - - - 0.722 0.819 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
78. nfyba ENSDARG00000039185 1804 1.54 - - - - - - 0.778 0.762 - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
79. axin2 ENSDARG00000100149 4223 1.54 - - - 0.720 - - - 0.820 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
80. atp7a ENSDARG00000003699 476 1.539 - 0.731 - - - - - 0.808 - ATPase copper transporting alpha [Source:ZFIN;Acc:ZDB-GENE-060825-45]
81. wu:fb30e12 wu:fb30e12 1254 1.539 - - - 0.718 - - 0.821 - -
82. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.537 - - - - - - 0.718 0.819 - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
83. eif4h ENSDARG00000042252 6742 1.533 - - - 0.710 - - 0.823 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
84. cdv3 ENSDARG00000023028 12380 1.532 0.761 - - - - - 0.771 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
85. CR388231.3 ENSDARG00000105601 2404 1.531 - - - - - - 0.700 0.831 -
86. rybpa ENSDARG00000037773 904 1.525 - - - - - - 0.792 0.733 - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
87. dnmbp ENSDARG00000074121 2711 1.525 - - - - - - - 0.823 0.702 dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
88. eif2s2 ENSDARG00000053047 15904 1.519 - - - - - 0.750 0.769 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
89. marcksa ENSDARG00000004049 2518 1.517 - - - 0.766 - - 0.751 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
90. si:ch211-13c6.2 ENSDARG00000027738 1521 1.515 - 0.740 - - - - - 0.775 - si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
91. znf148 ENSDARG00000055106 528 1.512 - - - - - - 0.789 0.723 - zinc finger protein 148 [Source:ZFIN;Acc:ZDB-GENE-030131-8769]
92. dnmt3 dnmt3 1912 1.511 - - - 0.722 - - 0.789 - -
93. pspc1 ENSDARG00000006621 966 1.507 - - - - - - 0.801 0.706 - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
94. nop16 ENSDARG00000044402 3645 1.505 - - - - - - 0.705 0.800 - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
95. sart3 ENSDARG00000008032 2594 1.504 - - - 0.725 - - - 0.779 - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
96. aimp1 ENSDARG00000060036 5343 1.502 - - - - - 0.711 0.791 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
97. vezf1a ENSDARG00000008247 1449 1.494 - - - - - - 0.774 0.720 - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
98. acadm ENSDARG00000038900 2319 1.493 - - - - - - 0.735 0.758 - acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]
99. ppm1la ENSDARG00000063218 2142 1.485 - - - - - - 0.758 0.727 - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
100. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.482 - - - 0.703 - - 0.779 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]

There are 1577 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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