Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for zgc:55558

Gene Name Gene ID Reads Annotation
zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]










Genes with expression patterns similar to zgc:55558

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
2. CR954963.1 ENSDARG00000097153 1135 3.473 0.708 0.812 - - 0.996 - - 0.957 -
3. ddx27 ENSDARG00000091831 1471 2.642 - - 0.980 0.792 - - - 0.870 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
4. nap1l4b ENSDARG00000068868 3285 2.522 - 0.834 0.976 - - - - 0.712 - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
5. ttk ENSDARG00000041361 3911 2.462 - - 0.882 0.765 - - - 0.815 - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
6. nr1h3 ENSDARG00000098439 859 1.938 - - 0.992 - - - - 0.946 - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
7. plxnb1b ENSDARG00000017211 4676 1.931 - - - - 0.982 - - 0.949 - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
8. rexo1 ENSDARG00000026986 770 1.921 - - 0.994 0.927 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
9. cks1b ENSDARG00000007971 2739 1.917 - - 0.925 - 0.992 - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
10. xpc ENSDARG00000039754 515 1.917 - - 0.993 0.924 - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
11. dpf2 ENSDARG00000012219 666 1.915 - - 0.984 0.931 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
12. NDST1 NDST1 1584 1.915 - - - 0.918 0.997 - - - -
13. mgaa ENSDARG00000078784 1344 1.908 - - 0.982 - - - - 0.926 - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
14. tmem2 2572 1.897 - - 0.969 - - - - 0.928 - transmembrane protein 2, transcript variant X1
15. phf10 ENSDARG00000070084 1210 1.896 - - 0.978 0.918 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
16. BX000999.4_1 BX000999.4_1 222 1.895 - - - 0.931 - - - 0.964 -
17. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.89 - - - 0.894 0.996 - - - -
18. snx12 ENSDARG00000019060 9563 1.89 - - 0.924 - 0.966 - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
19. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.888 - - - 0.892 0.996 - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
20. dnajc5ab ENSDARG00000004836 2923 1.885 - - 0.978 0.907 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
21. rnd3a ENSDARG00000076799 4705 1.871 - - - - - - 1.000 0.871 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
22. noc4l ENSDARG00000045565 1337 1.87 - - - 0.877 0.993 - - - - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
23. rpl7l1 ENSDARG00000042864 3256 1.862 - - 0.939 - - - - 0.923 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
24. crkl ENSDARG00000028699 2966 1.859 - - 0.966 - - - - 0.893 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
25. srrm2 ENSDARG00000037965 1967 1.858 - - 0.947 0.911 - - - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
26. cdan1 ENSDARG00000042261 658 1.854 - - - 0.900 - - - 0.954 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
27. cwc25 ENSDARG00000003382 2134 1.854 - - - 0.915 - - - 0.939 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
28. sf3a1 ENSDARG00000041887 6702 1.85 - - - - 0.991 - - 0.859 - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
29. rnf121 ENSDARG00000060282 1809 1.85 - - 0.951 - - - - 0.899 - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
30. CR548626.3 CR548626.3 423 1.842 - - - 0.922 - - - 0.920 -
31. lrp1b lrp1b 3216 1.838 - - 0.855 - 0.983 - - - -
32. axin2 ENSDARG00000100149 4223 1.835 - - 0.960 - - - - 0.875 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
33. ubl3b ENSDARG00000021556 1210 1.833 - - 0.992 0.841 - - - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
34. yy1a ENSDARG00000042796 4982 1.832 - 0.847 - - 0.985 - - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
35. klc2 3058 1.822 - - - 0.836 0.986 - - - - kinesin light chain 2
36. rtf1 ENSDARG00000008947 6596 1.822 - - 0.823 - - - 0.999 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
37. DLC1 ENSDARG00000079317 2149 1.812 - - 0.979 0.833 - - - - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
38. CPEB2 ENSDARG00000052604 2646 1.81 - - - 0.821 0.989 - - - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
39. ppp2r2d ENSDARG00000102009 5710 1.809 - - 0.834 - 0.975 - - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
40. plagl2 ENSDARG00000076657 2057 1.808 0.808 - - - - - 1.000 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
41. CR388095.3 CR388095.3 2548 1.806 - - - - - - 1.000 0.806 -
42. dnmt3 dnmt3 1912 1.802 - - - 0.824 0.978 - - - -
43. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 1.797 - 0.798 - - - - 0.999 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
44. ncl ENSDARG00000002710 16951 1.786 - - - - 0.790 - 0.996 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
45. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 1.782 - - - - 0.997 - - 0.785 - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
46. fabp7b ENSDARG00000034650 397 1.78 - - - 0.824 - - - 0.956 - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
47. smg6 ENSDARG00000100481 493 1.775 - 0.784 0.991 - - - - - - SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
48. ubtf ENSDARG00000035066 4070 1.772 - - - 0.788 0.984 - - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
49. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.772 0.792 - 0.980 - - - - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
50. C3H16orf13 C3H16orf13 652 1.771 - - 0.919 0.852 - - - - -
51. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1.77 - - - 0.770 - - 1.000 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
52. SHISA9 SHISA9 154 1.768 - 0.841 - 0.927 - - - - -
53. gpm6bb ENSDARG00000001676 2005 1.767 - - 0.876 0.891 - - - - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
54. safb ENSDARG00000020467 5608 1.766 - - 0.944 - - - - 0.822 - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
55. mdkb ENSDARG00000020708 5393 1.765 - - - 0.847 0.918 - - - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
56. fam173a ENSDARG00000041223, ENSDARG00000113102 639 1.765 - 0.813 - - - - - 0.952 - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
57. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.756 - - - 0.924 - 0.832 - - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
58. cenpf ENSDARG00000055133 5267 1.751 - 0.751 - - - - 1.000 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
59. hif1an ENSDARG00000031915 2098 1.749 - - - 0.902 - - - 0.847 - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
60. eprs ENSDARG00000060494 4729 1.748 - - 0.904 - - - - 0.844 - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
61. SPTBN4_1 ENSDARG00000092624 473 1.745 - - - 0.939 - - - 0.806 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
62. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.743 - - - 0.847 - - - 0.896 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
63. ABHD12B ABHD12B 1877 1.742 - - - 0.744 - - 0.998 - -
64. C10H11orf30 C10H11orf30 1982 1.74 - 0.756 0.984 - - - - - -
65. srebf2 ENSDARG00000063438 1982 1.733 - 0.739 0.994 - - - - - - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
66. irf2a ENSDARG00000007387 915 1.73 - - 0.988 0.742 - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
67. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 1.729 - 0.738 - - 0.991 - - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
68. dachc ENSDARG00000003142, ENSDARG00000109556 513 1.727 0.780 - - - - - - 0.947 - dachshund c [Source:ZFIN;Acc:ZDB-GENE-020402-5]
69. atp6ap1b ENSDARG00000037153 3970 1.726 - - - - - - 0.999 0.727 - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
70. plagx ENSDARG00000036855 3768 1.721 - - - 0.908 - - - 0.813 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
71. ppap2b ppap2b 2900 1.721 - 0.831 - - - - - 0.890 -
72. snrnp70 ENSDARG00000077126 5921 1.72 - - - - 0.993 - - 0.727 - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
73. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.718 - - 0.750 - 0.968 - - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
74. st3gal4 ENSDARG00000041006 636 1.717 0.720 - - - 0.997 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
75. exd3 ENSDARG00000063140 119 1.716 - - - - - 0.762 - 0.954 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
76. kmt2bb ENSDARG00000060697 5230 1.714 - - - 0.843 - - - 0.871 - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
77. mier1a ENSDARG00000041072 1690 1.71 - - - 0.748 - - - 0.962 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
78. pum1 ENSDARG00000099256 5017 1.71 - - 0.870 - - - - 0.840 - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
79. tmem33 ENSDARG00000041332 2883 1.707 - - - 0.720 0.987 - - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
80. NDUFB2 ENSDARG00000045490 9141 1.706 - - - - - 0.706 1.000 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
81. RBM26 ENSDARG00000104130 1012 1.701 - 0.822 - 0.879 - - - - - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
82. ptpn1 ENSDARG00000007923 3647 1.7 - 0.717 0.983 - - - - - - protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
83. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.699 - - 0.837 - 0.862 - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
84. atp5h 18018 1.695 - - - - - 0.708 0.987 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
85. MDC1 ENSDARG00000086764 1851 1.694 - - 0.972 - - - - - 0.722 mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
86. nsd1a ENSDARG00000060016 2974 1.694 - - - 0.870 - - - 0.824 - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
87. iqcb1 ENSDARG00000101032 310 1.692 - - - 0.895 - 0.797 - - - IQ motif containing B1 [Source:ZFIN;Acc:ZDB-GENE-041212-47]
88. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.692 - - 0.867 0.825 - - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
89. C3H19orf43 C3H19orf43 2961 1.69 - 0.770 - - - - - 0.920 -
90. fmnl2b ENSDARG00000075041 1744 1.689 - - 0.969 0.720 - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
91. stard3nl ENSDARG00000045421 316 1.687 - 0.742 - - - - - 0.945 - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
92. ndufs5 ENSDARG00000006290 15918 1.683 - - 0.851 - - - 0.832 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:ZFIN;Acc:ZDB-GENE-050522-437]
93. speg speg 334 1.682 - - - - - 0.721 - 0.961 -
94. trim13 ENSDARG00000010010, ENSDARG00000110876, ENSDARG00000114862 767 1.682 - 0.740 - - - - - 0.942 - tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]
95. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.681 - - 0.889 0.792 - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
96. prkar2aa ENSDARG00000033184 14704 1.681 - - - - 0.798 - 0.883 - - protein kinase, cAMP-dependent, regulatory, type II, alpha A [Source:ZFIN;Acc:ZDB-GENE-030131-1007]
97. kansl3 ENSDARG00000029556 2487 1.681 - - - - 0.980 - - 0.701 - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
98. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.676 - - - 0.839 - - - 0.837 - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
99. MAST1_1 MAST1_1 1595 1.674 - 0.724 - - - - - 0.950 -
100. POLE4 ENSDARG00000013016 848 1.672 - 0.758 - - - - - 0.914 - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]

There are 2073 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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