Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:193505

Gene Name Gene ID Reads Annotation
zgc:193505 ENSDARG00000093584, ENSDARG00000109499 47304 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]










Genes with expression patterns similar to zgc:193505

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 47304 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
2. anxa1c ENSDARG00000104359 23181 3.151 0.733 - 0.790 - 0.897 - - 0.731 - annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
3. cyt1l ENSDARG00000036832 118292 3.146 - - - - 0.805 0.821 - 0.747 0.773 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
4. s100a10b ENSDARG00000025254 25240 3.076 0.815 0.769 - - 0.740 - - 0.752 - S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
5. CU914813.1 CU914813.1 29656 2.442 0.811 0.771 - - - - - 0.860 -
6. KRT78 KRT78 10751 2.379 0.756 - - - 0.718 - - - 0.905
7. pfn1 ENSDARG00000088091 71242 2.321 0.799 - - 0.747 0.775 - - - - profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
8. FP067396.1 FP067396.1 32149 2.318 0.794 - 0.700 - 0.824 - - - -
9. faua ENSDARG00000099022 82901 1.732 - - - 0.781 - - - - 0.951 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
10. chmp4b chmp4b 5318 1.675 0.853 - - - - 0.822 - - -
11. napa napa 4444 1.663 0.854 - - 0.809 - - - - -
12. krt4 ENSDARG00000017624, ENSDARG00000115790 2008869 1.646 - 0.825 - - 0.821 - - - - keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
13. selt1a 9746 1.617 - 0.717 - - - - - - 0.900 selenoprotein T, 1a
14. zgc:92533 zgc:92533 141172 1.591 - 0.818 - - - - - 0.773 -
15. gale ENSDARG00000002401 5489 1.563 - 0.766 - - - - - 0.797 - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
16. zgc:109868 zgc:109868 7474 1.555 - - - 0.794 0.761 - - - -
17. dap ENSDARG00000000069, ENSDARG00000114419 13155 1.547 0.774 0.773 - - - - - - - death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
18. sec23b ENSDARG00000019360 6210 1.536 0.756 - - - - 0.780 - - - Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
19. alox12 ENSDARG00000069463 5787 1.526 0.794 0.732 - - - - - - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
20. icn2 ENSDARG00000055514 38531 1.516 - - - - 0.707 - - 0.809 - ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
21. zgc:85975 4738 1.514 0.749 - - - 0.765 - - - - zgc:85975
22. krt8 ENSDARG00000058358, ENSDARG00000109279 85624 1.508 - - 0.798 - - 0.710 - - - keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
23. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.497 0.722 - - - 0.775 - - - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
24. COL28A1_1 COL28A1_1 11434 1.482 - 0.709 - - 0.773 - - - -
25. zgc:194314 zgc:194314 982 1.462 0.719 0.743 - - - - - - -
26. cldnb ENSDARG00000009544 6036 1.46 0.723 0.737 - - - - - - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
27. bri3 ENSDARG00000086332 8405 1.436 0.707 0.729 - - - - - - - brain protein I3 [Source:ZFIN;Acc:ZDB-GENE-030131-3038]
28. bcl2l1 ENSDARG00000008434 1956 1.433 0.708 0.725 - - - - - - - bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
29. bcam ENSDARG00000090190 39912 0.95 - - - - - - - - 0.950 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
30. dynll1 ENSDARG00000058454 33932 0.906 - - - - - - - - 0.906 dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
31. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.903 - - - - - - - - 0.903 TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
32. arid3b ENSDARG00000104034 16303 0.901 - - - - - - - - 0.901 AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
33. TMEM185A TMEM185A 5505 0.901 - - - - - - - - 0.901
34. si:ch211-156j22.4 ENSDARG00000094977 4350 0.901 - - - - - - - - 0.901 si:ch211-156j22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-1968]
35. si:dkeyp-67e6.4 si:dkeyp-67e6.4 3680 0.901 - - - - - - - - 0.901
36. bcl7ba ENSDARG00000111877 3696 0.901 - - - - - - - - 0.901 BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
37. surf4 ENSDARG00000104647 4203 0.901 - - - - - - - - 0.901 surfeit gene 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1426]
38. GJD2_1 GJD2_1 3045 0.901 - - - - - - - - 0.901
39. mob4 ENSDARG00000056085 17978 0.901 - - - - - - - - 0.901 MOB family member 4, phocein [Source:ZFIN;Acc:ZDB-GENE-040801-174]
40. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.901 - - - - - - - - 0.901 cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
41. anxa1b ENSDARG00000100095 7763 0.899 - - - - - 0.899 - - - annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
42. chd7 ENSDARG00000075211 12085 0.896 - - - - - - - - 0.896 chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
43. cry3_1 cry3_1 3347 0.89 0.890 - - - - - - - -
44. skib ENSDARG00000008034 6518 0.886 - - - - - - - - 0.886 v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
45. ctsd ENSDARG00000057698, ENSDARG00000110172, ENSDARG00000113876 14357 0.884 - - - - - - 0.884 - - cathepsin D [Source:ZFIN;Acc:ZDB-GENE-010131-8]
46. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 0.878 - - - - - - - - 0.878 zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
47. surf4l ENSDARG00000035131 3648 0.876 0.876 - - - - - - - - surfeit gene 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-172]
48. rtn1a ENSDARG00000006497 19339 0.875 0.875 - - - - - - - - reticulon 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2426]
49. cebpb ENSDARG00000042725 3921 0.873 0.873 - - - - - - - - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
50. ZFHX3 ENSDARG00000103057 7759 0.872 - - - - - - - - 0.872 zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
51. mvp ENSDARG00000021242 6875 0.866 0.866 - - - - - - - - major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
52. rps17 ENSDARG00000104011 27028 0.862 - - - 0.862 - - - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
53. col11a1b ENSDARG00000009014 9998 0.861 - - - - - - - - 0.861 collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
54. rps5 ENSDARG00000043453 91085 0.86 - - - - - - - - 0.860 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
55. col9a2 ENSDARG00000024492 20234 0.856 - - - 0.856 - - - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
56. mir203b 1077 0.852 0.852 - - - - - - - - microRNA 203b
57. atpv0e1 atpv0e1 1957 0.849 0.849 - - - - - - - -
58. CR382298.3 CR382298.3 666 0.848 0.848 - - - - - - - -
59. rabac1 ENSDARG00000004171 2708 0.848 0.848 - - - - - - - - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
60. CABZ01044814.2 CABZ01044814.2 25711 0.846 - - - - - - - - 0.846
61. CABZ01045212.1 ENSDARG00000087525 1460 0.844 0.844 - - - - - - - - major facilitator superfamily domain-containing protein 8-like [Source:NCBI gene;Acc:564731]
62. mpv17 ENSDARG00000032431 1225 0.843 0.843 - - - - - - - - MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
63. cyb5r3 ENSDARG00000005891 4440 0.84 - - - - - 0.840 - - - cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
64. rbp1a rbp1a 9847 0.839 0.839 - - - - - - - -
65. capn2b ENSDARG00000055592 5431 0.835 - - - 0.835 - - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
66. MPC2 ENSDARG00000024478 4194 0.834 0.834 - - - - - - - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
67. emc6 ENSDARG00000035282 4981 0.832 - - - 0.832 - - - - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
68. icn ENSDARG00000009978 85647 0.83 - - - - - - - 0.830 - ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
69. gpx4b ENSDARG00000076836 8085 0.83 - - - 0.830 - - - - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
70. TMEM179 ENSDARG00000013292 3452 0.83 0.830 - - - - - - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
71. hadhb ENSDARG00000102055 9700 0.829 - - - 0.829 - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
72. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 0.829 - - - 0.829 - - - - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
73. arhgdig ENSDARG00000004034 10368 0.828 - - - 0.828 - - - - - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
74. arhgdia ENSDARG00000043795 14642 0.825 0.825 - - - - - - - - Rho GDP dissociation inhibitor (GDI) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2816]
75. vimp 4034 0.825 - - - 0.825 - - - - - VCP-interacting membrane selenoprotein
76. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.824 - - - - - 0.824 - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
77. rplp0 ENSDARG00000051783 88740 0.822 - - - - - - - - 0.822 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
78. srm ENSDARG00000055760 6572 0.822 - - - 0.822 - - - - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
79. wu:fb17g07 wu:fb17g07 10567 0.822 - - - 0.822 - - - - -
80. eif3ha ENSDARG00000102452 9238 0.821 - - - 0.821 - - - - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
81. CU929307.1 ENSDARG00000102297 900 0.82 - - - - - - - 0.820 -
82. ywhaz ENSDARG00000032575 15257 0.819 - - - - - 0.819 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
83. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 0.819 - - - 0.819 - - - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
84. SFT2D2 SFT2D2 431 0.817 - - - - - - - 0.817 -
85. irf6 ENSDARG00000101986 1438 0.816 0.816 - - - - - - - - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
86. trappc1 ENSDARG00000039005 6990 0.816 - - - 0.816 - - - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
87. pdcd4a ENSDARG00000021702 7293 0.815 - - - 0.815 - - - - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
88. slc25a3b ENSDARG00000025566 32264 0.815 - - - 0.815 - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]
89. RPL37A RPL37A 62256 0.815 - - - - - - - - 0.815
90. mob3a ENSDARG00000019113 2551 0.815 - - - 0.815 - - - - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
91. capza1a ENSDARG00000034240 24012 0.815 - - - - - - 0.815 - - capping actin protein of muscle Z-line subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5237]
92. bckdhbl ENSDARG00000093569 2166 0.814 - 0.814 - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-060830-1]
93. krt17 ENSDARG00000094041 7683 0.814 0.814 - - - - - - - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
94. si:ch73-110p20.1 5932 0.814 - - - 0.814 - - - - - si:ch73-110p20.1
95. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.814 - - - 0.814 - - - - - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
96. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 0.814 - - - 0.814 - - - - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
97. pgam1a ENSDARG00000005423 3986 0.814 - 0.814 - - - - - - - phosphoglycerate mutase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1827]
98. cfl1l ENSDARG00000012972 109130 0.813 - - - - 0.813 - - - - cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
99. gart ENSDARG00000101089 6062 0.812 0.812 - - - - - - - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
100. hsd17b12a ENSDARG00000015709 2499 0.812 0.812 - - - - - - - - hydroxysteroid (17-beta) dehydrogenase 12a [Source:ZFIN;Acc:ZDB-GENE-030131-5628]

There are 269 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA