Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:172053

Gene Name Gene ID Reads Annotation
zgc:172053 ENSDARG00000038321 9 zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]










Genes with expression patterns similar to zgc:172053

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:172053 ENSDARG00000038321 9 7 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
2. foxl2 61 2 1.000 - - - - 1.000 - - - forkhead box L2, transcript variant X1
3. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 2 - - - - - 1.000 1.000 - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
4. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 2 - - - - 1.000 1.000 - - - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]
5. si:ch211-238g23.1 ENSDARG00000055746 23 2 - - - - - 1.000 1.000 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
6. C7H10orf112 C7H10orf112 15 2 - - - - 1.000 1.000 - - -
7. GPR78 GPR78 17 2 - - - - - 1.000 1.000 - -
8. rag2 ENSDARG00000052121 15 1.941 1.000 - - - 0.941 - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
9. cldnd ENSDARG00000006580 17 1.903 1.000 - - - 0.903 - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
10. slc24a1 ENSDARG00000041431 33 1.861 1.000 - - - 0.861 - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
11. pdia2 ENSDARG00000018263 74 1.856 1.000 - - - - 0.856 - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
12. CABZ01016604.1 CABZ01016604.1 12 1.836 - - - - - 1.000 0.836 - -
13. TMEM245 ENSDARG00000070455 85 1.798 1.000 - - - - - 0.798 - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
14. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1.751 1.000 - - - - 0.751 - - -
15. trpc2 trpc2 10 1.748 1.000 - - - - - - 0.748 -
16. wisp1b ENSDARG00000076685 38 1.737 1.000 - - - - 0.737 - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
17. mir138 19 1.716 1.000 - - - - - - 0.716 - microRNA 138
18. npy8br ENSDARG00000005780 15 1.607 - - - - - - 0.847 0.760 - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
19. mybpha ENSDARG00000058799 53 1.569 - - - - 0.830 - 0.739 - - myosin binding protein Ha [Source:ZFIN;Acc:ZDB-GENE-040426-1531]
20. prkaa2 ENSDARG00000060641 12 1.566 - - 0.768 - - - 0.798 - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081120-5]
21. myb ENSDARG00000053666, ENSDARG00000114024 58 1.558 0.852 - 0.706 - - - - - - v-myb avian myeloblastosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-991110-14]
22. zgc:112294 ENSDARG00000010602 23 1.483 - - - - - 0.737 0.746 - - zgc:112294 [Source:ZFIN;Acc:ZDB-GENE-050522-418]
23. TIMP4 TIMP4 599 1.445 - - - - 0.716 - 0.729 - -
24. AL645691.4 AL645691.4 0 1 1.000 - - - - - - - -
25. gphb5 ENSDARG00000027472 8 1 - - - - - 1.000 - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]
26. si:dkey-57a22.12 si:dkey-57a22.12 23 1 1.000 - - - - - - - -
27. sox17 ENSDARG00000101717 11 1 - - - - - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
28. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
29. SNORA63 SNORA63 7 1 - - - - - - 1.000 - -
30. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
31. dre-mir-2189 ENSDARG00000098723 9 1 - - - - - 1.000 - - - dre-mir-2189 [Source:miRBase;Acc:MI0010851]
32. CABZ01073112.1 CABZ01073112.1 40 1 - - - - - - 1.000 - -
33. si:ch211-219a15.3 ENSDARG00000087659 12 1 1.000 - - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
34. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
35. Metazoa_SRP_27 Metazoa_SRP_27 2 1 1.000 - - - - - - - -
36. si:dkey-7l6.3 ENSDARG00000094514 146 1 1.000 - - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
37. BIN1 BIN1 11 1 1.000 - - - - - - - -
38. si:dkey-253d23.9 ENSDARG00000074820 24 1 1.000 - - - - - - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
39. ME1 ENSDARG00000053215 8 1 - - - - - 1.000 - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
40. tctn2 ENSDARG00000035633 84 1 1.000 - - - - - - - - tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
41. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 1.000 - - - - - - - -
42. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
43. CABZ01061914.2 CABZ01061914.2 2 1 - - - - - 1.000 - - -
44. Mar-01 Mar-01 176 1 1.000 - - - - - - - -
45. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - - - - 1.000 - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
46. si:ch211-141e20.6 si:ch211-141e20.6 25 1 - - - - - 1.000 - - -
47. dgkza ENSDARG00000014439 82 1 - - - - - - 1.000 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
48. ripply2 ENSDARG00000070535 18 1 - - - - - - 1.000 - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
49. BX120005.1 ENSDARG00000089327 1 1 - - - - - 1.000 - - - cytotoxic and regulatory T-cell molecule [Source:NCBI gene;Acc:101884219]
50. hamp2 hamp2 67 1 - - - - 1.000 - - - -
51. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
52. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
53. gh1 ENSDARG00000038185 1 1 1.000 - - - - - - - - growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
54. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
55. fam19a1 7 1 - - - - - 1.000 - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
56. ZNF70_9 ZNF70_9 1 1 - - - - - 1.000 - - -
57. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
58. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - - - - 1.000 - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
59. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
60. zgc:92275 ENSDARG00000034048 9 1 1.000 - - - - - - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
61. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - 1.000 - -
62. DTX4_1 ENSDARG00000076302 31 1 - - - - - 1.000 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
63. s1pr5b ENSDARG00000052192 52 1 - - - - - 1.000 - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
64. CABZ01024686.1 CABZ01024686.1 1 1 1.000 - - - - - - - -
65. zgc:92590 ENSDARG00000040282 13 1 - - - - - 1.000 - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
66. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
67. itga11b ENSDARG00000007950 17 1 - - - - 1.000 - - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
68. CABZ01090975.1 CABZ01090975.1 9 1 - - - - - - 1.000 - -
69. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
70. ddrgk1 ENSDARG00000037172 14 1 1.000 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
71. gnai3 ENSDARG00000030644 29 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
72. U1_29 U1_29 0 1 1.000 - - - - - - - -
73. RAPGEF4 ENSDARG00000079872 82 1 - - - - - - 1.000 - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
74. si:rp71-81e14.2 ENSDARG00000103077, ENSDARG00000109312 8 1 - - - - 1.000 - - - - si:rp71-81e14.2 [Source:ZFIN;Acc:ZDB-GENE-060503-95]
75. CR936465.1 CR936465.1 7 1 1.000 - - - - - - - -
76. hspbap1 ENSDARG00000033771 41 1 1.000 - - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
77. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
78. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
79. TRIM14_3 TRIM14_3 7 1 - - - - - - 1.000 - -
80. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - 1.000 - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
81. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - - 1.000 - -
82. or111-4 ENSDARG00000088846 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 4 [Source:ZFIN;Acc:ZDB-GENE-010308-16]
83. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 1.000 - - - - - - - -
84. PCBP3 ENSDARG00000054378 17 1 1.000 - - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
85. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - - 1.000 - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
86. si:dkey-26g8.11 si:dkey-26g8.11 4 1 - - - - - 1.000 - - -
87. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
88. TNS3_1 TNS3_1 8 1 - - - - - - 1.000 - -
89. apnl ENSDARG00000090900 21 1 - - - - - 1.000 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
90. BX119910.9 BX119910.9 7 1 - - - - - 1.000 - - -
91. scospondin ENSDARG00000067859 4 1 1.000 - - - - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
92. cthrc1b ENSDARG00000001971 44 1 - - - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
93. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1 1.000 - - - - - - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
94. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - 1.000 - - - -
95. zgc:153151 ENSDARG00000069563 126 1 1.000 - - - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
96. sema4aa ENSDARG00000077103 4 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Aa [Source:ZFIN;Acc:ZDB-GENE-110411-86]
97. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
98. zswim7 ENSDARG00000067608 179 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
99. BX927349.1 ENSDARG00000097041 1 1 - - - - - 1.000 - - - si:dkey-84k15.7 [Source:NCBI gene;Acc:103909075]
100. ccdc78 ENSDARG00000030095 8 1 - - - - - 1.000 - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]

There are 785 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA