Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:171759_5

Gene Name Gene ID Reads Annotation
zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]










Genes with expression patterns similar to zgc:171759_5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
2. rs1 rs1 70 2 1.000 - - - - 1.000 - - -
3. traf1 ENSDARG00000069482 50 2 1.000 - - - - 1.000 - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
4. CU638740.1 CU638740.1 398 1.996 1.000 - - - - - 0.996 - -
5. zgc:161969 ENSDARG00000041359 898 1.965 - - - - 0.977 - 0.988 - - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
6. GMIP ENSDARG00000077249 43 1.951 1.000 - - - - 0.951 - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
7. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.92 - - - - 0.929 - 0.991 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
8. mrpl27 ENSDARG00000032985 2158 1.908 - - - - 0.968 - 0.940 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
9. chst11 ENSDARG00000034375 2701 1.875 - - - - 0.917 - 0.958 - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
10. cdkn2aipnl ENSDARG00000053395 5107 1.86 - - - - 0.934 - 0.926 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
11. mrpl12 ENSDARG00000038768 5539 1.842 - - - - 0.895 - 0.947 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
12. zgc:173962 zgc:173962 67 1.837 - - - - - 0.837 1.000 - -
13. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.822 - - - - 0.893 - 0.929 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
14. unc5b ENSDARG00000033327 3432 1.78 - - - - 0.963 - 0.817 - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
15. macrod1 ENSDARG00000029609 66 1.779 0.779 - - - - 1.000 - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
16. sdc2 ENSDARG00000002731 6607 1.746 - - - - 0.881 - 0.865 - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
17. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.746 - - - - 0.786 - 0.960 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
18. ppp1cb ENSDARG00000044153 4748 1.74 - - - - 0.941 - 0.799 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
19. rdh14a ENSDARG00000039299 79 1.738 1.000 0.738 - - - - - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
20. frem1b ENSDARG00000062402 750 1.726 - 0.729 - - 0.997 - - - - Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]
21. PRODH_1 PRODH_1 3400 1.726 - - - - 0.964 - 0.762 - -
22. LARS2 ENSDARG00000075337 181 1.724 - 0.724 - - - 1.000 - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
23. wbscr22 wbscr22 644 1.705 - 0.730 - - - - 0.975 - -
24. CAPN5 CAPN5 357 1.705 - 0.710 - - - - 0.995 - -
25. col14a1a ENSDARG00000005762 4778 1.701 - - - - 0.720 - 0.981 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
26. hoxc4a ENSDARG00000070338 1382 1.693 - 0.711 - - 0.982 - - - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
27. laptm4b ENSDARG00000035870, ENSDARG00000110893 960 1.69 - 0.725 - - - - 0.965 - - lysosomal protein transmembrane 4 beta [Source:ZFIN;Acc:ZDB-GENE-030616-616]
28. ak2 ENSDARG00000005926 7598 1.677 - - - - 0.813 - 0.864 - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
29. CBFA2T3 ENSDARG00000079012 6799 1.559 - 0.789 - - 0.770 - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
30. sc:d217 ENSDARG00000079645 32 1.559 0.809 - - - - 0.750 - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
31. CU467646.1_1 ENSDARG00000075090 128 1.53 0.705 0.825 - - - - - - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
32. zgc:171422 ENSDARG00000104715 255 1.5 - 0.783 - - - 0.717 - - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
33. fhit_1 ENSDARG00000078195 91 1.463 - 0.738 - - - 0.725 - - - fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
34. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - - - - - 1.000 - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
35. lppr4a lppr4a 141 1 - - - - - - 1.000 - -
36. zap70 ENSDARG00000015752 1 1 - - - - - 1.000 - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
37. si:ch211-1e14.4 si:ch211-1e14.4 1 1 1.000 - - - - - - - -
38. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - - - - - 1.000 - - -
39. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - 1.000 - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
40. tbx19 ENSDARG00000079187 133 1 - - - - 1.000 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
41. cx52.9 ENSDARG00000086453 7 1 1.000 - - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
42. TRIM14_8 TRIM14_8 5 1 1.000 - - - - - - - -
43. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - - - - - 1.000 - - -
44. mms22l ENSDARG00000074691 232 1 - - - - - 1.000 - - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
45. EML4 7 1 - - - - - 1.000 - - - echinoderm microtubule associated protein like 4
46. BX323444.2 ENSDARG00000117710 13 1 1.000 - - - - - - - -
47. si:ch211-261n9.2 si:ch211-261n9.2 4 1 - - - - - 1.000 - - -
48. asb6 ENSDARG00000007125 389 1 - - - - - - 1.000 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
49. trib1 ENSDARG00000110963 1 1 1.000 - - - - - - - - tribbles pseudokinase 1 [Source:ZFIN;Acc:ZDB-GENE-091207-4]
50. smarcd3b ENSDARG00000019969 11 1 1.000 - - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
51. fam136a ENSDARG00000098401 50 1 - - - - - 1.000 - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
52. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - - - - 1.000 - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
53. erbb4a ENSDARG00000063207 55 1 1.000 - - - - - - - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
54. si:dkey-238o14.8 si:dkey-238o14.8 32 1 - - - - - 1.000 - - -
55. si:dkey-3h3.3 ENSDARG00000067718 225 1 1.000 - - - - - - - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
56. BX324215.3 BX324215.3 12 1 - - - - - 1.000 - - -
57. zbtb47a ENSDARG00000057751 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 47a [Source:ZFIN;Acc:ZDB-GENE-081104-121]
58. TMC5 ENSDARG00000013252 22 1 - - - - - 1.000 - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
59. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 1.000 - - - - - - - -
60. FASN ENSDARG00000087657 18 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
61. si:dkey-209n16.2 ENSDARG00000095914 27 1 1.000 - - - - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
62. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 - - - - - 1.000 - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
63. mstna ENSDARG00000042947 1 1 - - - - - 1.000 - - - myostatin a [Source:ZFIN;Acc:ZDB-GENE-050208-735]
64. polr3b ENSDARG00000062915, ENSDARG00000113895 144 1 - - - - - 1.000 - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-030131-2887]
65. cdc14aa ENSDARG00000013858 18 1 - - - - - 1.000 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
66. zgc:113389 zgc:113389 123 1 - - - - - 1.000 - - -
67. si:dkey-43k4.4 si:dkey-43k4.4 4 1 - - - - - 1.000 - - -
68. si:dkeyp-68b7.5 ENSDARG00000079930 14 1 - - - - - 1.000 - - - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
69. lama3 ENSDARG00000071462 1 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
70. SLC47A1_2 SLC47A1_2 50 1 1.000 - - - - - - - -
71. ltk ENSDARG00000042861, ENSDARG00000116109 76 1 1.000 - - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
72. Mar-01 Mar-01 176 1 - - - - 1.000 - - - -
73. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1 - - - - - 1.000 - - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
74. KCNA2 KCNA2 66 1 - - - - - 1.000 - - -
75. ttc12 ENSDARG00000056896 97 1 1.000 - - - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
76. smad6b ENSDARG00000031763 12 1 1.000 - - - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
77. luzp2 ENSDARG00000068247 80 1 1.000 - - - - - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
78. rhoh ENSDARG00000070121 1 1 - - - - - 1.000 - - - ras homolog family member H [Source:ZFIN;Acc:ZDB-GENE-060228-7]
79. lars2 ENSDARG00000075337 31 1 1.000 - - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
80. si:ch211-120c15.1 si:ch211-120c15.1 20 1 1.000 - - - - - - - -
81. guk1b ENSDARG00000005776 23 1 1.000 - - - - - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
82. CABZ01061549.1 CABZ01061549.1 17 1 1.000 - - - - - - - -
83. or111-3 ENSDARG00000086633 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
84. gtf3c2 ENSDARG00000004574 153 1 - - - - - 1.000 - - - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
85. zgc:158654 19 1 1.000 - - - - - - - - zgc:158654, transcript variant X1
86. BX936386.1 ENSDARG00000097166 5 1 - - - - - 1.000 - - -
87. fermt3b ENSDARG00000030938 17 1 - - - - - 1.000 - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
88. CABZ01054394.3 CABZ01054394.3 60 1 1.000 - - - - - - - -
89. CU638695.1 CU638695.1 90 1 - - - - - 1.000 - - -
90. rnf150a_1 ENSDARG00000024827 12 1 1.000 - - - - - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
91. FAM150B FAM150B 29 1 - - - - - 1.000 - - -
92. DYDC2 ENSDARG00000101848 2 1 - - - - - 1.000 - - - DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
93. si:dkey-40j3.1 si:dkey-40j3.1 1 1 - - - - - 1.000 - - -
94. si:ch211-232m19.4 19 1 1.000 - - - - - - - - si:ch211-232m19.4
95. uckl1a ENSDARG00000001686 21 1 1.000 - - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
96. TGFBR3L TGFBR3L 16 1 - - - - - 1.000 - - -
97. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 1 - - - - - 1.000 - - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
98. BX248122.1 ENSDARG00000112449 1 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:103910472]
99. ttr ENSDARG00000037191 11 1 - - - - - 1.000 - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
100. TRIM14_3 TRIM14_3 7 1 - - - - - 1.000 - - -

There are 1233 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA