Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:171759_3

Gene Name Gene ID Reads Annotation
zgc:171759_3 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 2 zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]










Genes with expression patterns similar to zgc:171759_3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:171759_3 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 2 1 - - 1.000 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
2. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 0.984 - - 0.984 - - - - - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
3. si:ch211-179l5.4 si:ch211-179l5.4 3 0.926 - - 0.926 - - - - - -
4. si:ch211-173b9.5 si:ch211-173b9.5 2 0.926 - - 0.926 - - - - - -
5. igfbp6a ENSDARG00000070941 9 0.926 - - 0.926 - - - - - - insulin-like growth factor binding protein 6a [Source:ZFIN;Acc:ZDB-GENE-090521-1]
6. si:ch211-204a13.1 si:ch211-204a13.1 6 0.926 - - 0.926 - - - - - -
7. XCR1 XCR1 9 0.926 - - 0.926 - - - - - -
8. kcnd2 ENSDARG00000032799 1 0.926 - - 0.926 - - - - - - potassium voltage-gated channel, Shal-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-041210-70]
9. CU207301.2 ENSDARG00000097677 2 0.926 - - 0.926 - - - - - -
10. ENSDARG00000089100 ENSDARG00000089100 5 0.926 - - 0.926 - - - - - -
11. antxr1a ENSDARG00000025672 32 0.926 - - 0.926 - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
12. gbgt1l1 ENSDARG00000025275 21 0.926 - - 0.926 - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
13. ifnphi1 ENSDARG00000025607 6 0.926 - - 0.926 - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
14. rhoga ENSDARG00000068653 13 0.926 - - 0.926 - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
15. si:dkey-26i13.6 ENSDARG00000092200 3 0.926 - - 0.926 - - - - - - si:dkey-26i13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-165]
16. HELZ2_1 ENSDARG00000012600 53 0.925 - - 0.925 - - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
17. ighm ighm 6 0.924 - - 0.924 - - - - - -
18. CABZ01002345.1 CABZ01002345.1 3 0.922 - - 0.922 - - - - - -
19. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 0.915 - - 0.915 - - - - - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
20. tsen54 ENSDARG00000036844 11 0.913 - - 0.913 - - - - - - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
21. si:ch211-279l9.7 si:ch211-279l9.7 3 0.911 - - 0.911 - - - - - -
22. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 0.907 - - 0.907 - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
23. bmp15 ENSDARG00000037491 16 0.907 - - 0.907 - - - - - - bone morphogenetic protein 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6115]
24. ms4a17a.4 ENSDARG00000014024 36 0.905 - - 0.905 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
25. MDFI ENSDARG00000089564 8 0.902 - - 0.902 - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
26. LRFN2_1 LRFN2_1 17 0.9 - - 0.900 - - - - - -
27. art4 ENSDARG00000078178 44 0.898 - - 0.898 - - - - - - ADP-ribosyltransferase 4 (Dombrock blood group) [Source:ZFIN;Acc:ZDB-GENE-070725-5]
28. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 0.898 - - 0.898 - - - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
29. CDH16 ENSDARG00000077570 78 0.894 - - 0.894 - - - - - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
30. TRAPPC9 ENSDARG00000099118 26 0.891 - - 0.891 - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
31. WIPF1 WIPF1 32 0.889 - - 0.889 - - - - - -
32. calml4a ENSDARG00000075800 14 0.888 - - 0.888 - - - - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
33. si:ch211-179l5.6 si:ch211-179l5.6 33 0.878 - - 0.878 - - - - - -
34. TNIP2 ENSDARG00000074501 35 0.864 - - 0.864 - - - - - - TNFAIP3 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120913-2]
35. FAM200A FAM200A 19 0.862 - - 0.862 - - - - - -
36. eif4e1b ENSDARG00000014565 12 0.857 - - 0.857 - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
37. ncf2 ENSDARG00000005821 28 0.85 - - 0.850 - - - - - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
38. si:ch211-73m21.1 ENSDARG00000096491 10 0.849 - - 0.849 - - - - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
39. casp3b ENSDARG00000055045 54 0.847 - - 0.847 - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
40. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 0.846 - - 0.846 - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
41. LETMD1 ENSDARG00000030641, ENSDARG00000110586 13 0.839 - - 0.839 - - - - - - LETM1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080723-8]
42. lrtomt lrtomt 39 0.839 - - 0.839 - - - - - -
43. CU138503.3 CU138503.3 31 0.832 - - 0.832 - - - - - -
44. si:dkeyp-51b9.3 ENSDARG00000092379 1374 0.83 - - 0.830 - - - - - - si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
45. ENSDARG00000091382 ENSDARG00000091382 4 0.824 - - 0.824 - - - - - -
46. CABZ01038313.1 CABZ01038313.1 79 0.824 - - 0.824 - - - - - -
47. zgc:113176 ENSDARG00000040487 30 0.811 - - 0.811 - - - - - - zgc:113176 [Source:ZFIN;Acc:ZDB-GENE-050327-60]
48. RDM1 RDM1 28 0.811 - - 0.811 - - - - - -
49. cldn17 ENSDARG00000099950 14 0.801 - - 0.801 - - - - - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
50. cbln2b ENSDARG00000077151 38 0.799 - - 0.799 - - - - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
51. zgc:171779 ENSDARG00000016908 26 0.79 - - 0.790 - - - - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
52. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 0.781 - - 0.781 - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
53. gpr112b gpr112b 28 0.778 - - 0.778 - - - - - -
54. acy3.1 ENSDARG00000093003 54 0.778 - - 0.778 - - - - - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
55. TMEM116 TMEM116 96 0.774 - - 0.774 - - - - - -
56. ZNF835 ZNF835 6 0.76 - - 0.760 - - - - - -
57. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 0.756 - - 0.756 - - - - - -
58. IL17RA_1 IL17RA_1 39 0.752 - - 0.752 - - - - - -
59. ankmy2a ENSDARG00000005948 141 0.745 - - 0.745 - - - - - - ankyrin repeat and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6321]
60. ABHD12B_1 ABHD12B_1 57 0.737 - - 0.737 - - - - - -
61. rcn2 ENSDARG00000039378, ENSDARG00000110051, ENSDARG00000113764 61 0.731 - - 0.731 - - - - - - reticulocalbin 2 [Source:ZFIN;Acc:ZDB-GENE-050706-62]
62. si:dkey-97l20.5 si:dkey-97l20.5 33 0.724 - - 0.724 - - - - - -
63. klc4 ENSDARG00000086985 4 0.709 - - 0.709 - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
64. DLK1 60 0.708 - - 0.708 - - - - - - delta like non-canonical Notch ligand 1
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA