Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:171551

Gene Name Gene ID Reads Annotation
zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]










Genes with expression patterns similar to zgc:171551

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
2. gbgt1l1 ENSDARG00000025275 21 2.401 0.863 0.796 - - - - 0.742 - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
3. si:dkeyp-3f10.17 ENSDARG00000087254 1 2 - - - - - 1.000 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
4. top3b ENSDARG00000027586 8 2 - - - - - 1.000 1.000 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
5. PGBD4_4 PGBD4_4 15 2 - - - - - 1.000 1.000 - -
6. si:dkey-88n24.8 ENSDARG00000091095 9 1.886 - 0.886 - - - 1.000 - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
7. st6galnac ENSDARG00000086292 29 1.886 - 0.886 - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
8. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1.886 - 0.886 - - - - 1.000 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
9. gcnt3 ENSDARG00000060471 37 1.881 - 0.881 - - - - 1.000 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
10. si:ch73-77n15.1 si:ch73-77n15.1 2 1.863 0.863 - - - - - 1.000 - -
11. nub1 ENSDARG00000061417 33 1.858 - - - - - 0.954 0.904 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
12. si:ch211-63o20.7 ENSDARG00000042000 93 1.83 - - - - 0.897 - 0.933 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
13. CABZ01073654.1 CABZ01073654.1 16 1.827 - - 0.911 - - - 0.916 - -
14. si:ch211-237l4.6 ENSDARG00000056915 49 1.785 - - - - - 0.871 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
15. derl3 ENSDARG00000033871, ENSDARG00000114961 36 1.773 - - 0.875 - 0.898 - - - - derlin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1324]
16. zgc:193801 ENSDARG00000076552 37 1.753 - - - - 0.821 - 0.932 - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
17. oprk1 ENSDARG00000006894 43 1.729 - - 0.753 - - - 0.976 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
18. FRMD7 ENSDARG00000068958 17 1.727 - - 0.727 - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
19. GSTK1_2 GSTK1_2 8 1.727 - - 0.727 - - 1.000 - - -
20. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1.726 - 0.726 - - - 1.000 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
21. ARSJ ENSDARG00000077590 684 1.721 - 0.808 - - - - 0.913 - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
22. pkhd1l1 ENSDARG00000091116 23 1.718 - - - - - - 1.000 0.718 - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
23. tbx18 ENSDARG00000036930 390 1.716 - - - - 0.758 - 0.958 - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
24. s100a10a ENSDARG00000037425 237 1.709 - - - - 0.891 - 0.818 - - S100 calcium binding protein A10a [Source:ZFIN;Acc:ZDB-GENE-041010-35]
25. slx4ip ENSDARG00000039069 260 1.707 0.942 - - - - - 0.765 - - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
26. si:rp71-7l19.6 si:rp71-7l19.6 12 1.697 0.863 0.834 - - - - - - -
27. neu3.3 ENSDARG00000058327, ENSDARG00000114607 23 1.689 - 0.881 - - - 0.808 - - - sialidase 3 (membrane sialidase), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-061103-511]
28. C25H12orf5 C25H12orf5 65 1.674 - 0.881 - - - - 0.793 - -
29. CR762483.1 ENSDARG00000114454 44 1.667 - 0.855 - - 0.812 - - - - growth-regulated alpha protein-like [Source:NCBI gene;Acc:101883994]
30. si:dkey-239i20.2 ENSDARG00000043518, ENSDARG00000111965 23 1.665 - 0.859 - - - - 0.806 - - si:dkey-239i20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-98]
31. paqr7a ENSDARG00000100462 15 1.657 - 0.743 - - - - 0.914 - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
32. CAPN2 CAPN2 1497 1.654 0.768 0.886 - - - - - - -
33. TMEM260 ENSDARG00000076362 63 1.65 - - - - 0.787 - 0.863 - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
34. BX548047.2 ENSDARG00000115500 17 1.649 0.863 - - - - - - 0.786 -
35. C13H2orf50 C13H2orf50 87 1.647 0.768 - - - - 0.879 - - -
36. adam8b ENSDARG00000057644 108 1.632 - 0.720 - - - - 0.912 - - ADAM metallopeptidase domain 8b [Source:ZFIN;Acc:ZDB-GENE-070808-1]
37. eml3 ENSDARG00000058038 449 1.631 - 0.713 - - - - 0.918 - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
38. si:dkey-10p5.7 26 1.626 - 0.832 - - - - 0.794 - - si:dkey-10p5.7
39. MAATS1 ENSDARG00000006292 59 1.622 - 0.737 - - 0.885 - - - - MYCBP-associated, testis expressed 1 [Source:ZFIN;Acc:ZDB-GENE-070912-489]
40. si:dkey-86e18.1 ENSDARG00000043536 75 1.621 - - - - - 0.717 0.904 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
41. ppil6 ENSDARG00000042157 45 1.618 0.863 - - - - 0.755 - - - peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
42. ENSDARG00000092910 ENSDARG00000092910 44 1.602 - - - - - 0.808 0.794 - -
43. si:ch73-109d9.1 ENSDARG00000052019 248 1.594 0.746 - - - - - 0.848 - - si:ch73-109d9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-256]
44. si:dkey-165i8.5 si:dkey-165i8.5 21 1.581 - - - - - 0.808 0.773 - -
45. gchfr ENSDARG00000098588 169 1.578 - 0.750 - - - - 0.828 - - GTP cyclohydrolase I feedback regulator [Source:ZFIN;Acc:ZDB-GENE-040426-1731]
46. usp20 ENSDARG00000027501, ENSDARG00000116822 211 1.576 0.719 - - - - - 0.857 - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
47. csnk1g1 ENSDARG00000104342 57 1.538 0.760 - - - 0.778 - - - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
48. stx3a ENSDARG00000001880 69 1.527 - 0.769 - - - - 0.758 - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
49. BX649431.1 ENSDARG00000098522 13 1.487 - - - 0.703 - - - 0.784 -
50. mirlet7i 192 1.483 0.764 - - - 0.719 - - - - microRNA let-7i
51. nsun4 ENSDARG00000021324 482 1.437 0.715 - - - - - 0.722 - - NOL1/NOP2/Sun domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-041212-77]
52. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - - 1.000 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
53. BX537305.1 ENSDARG00000113834 10 1 - - - - - - 1.000 - -
54. FAM188B2 4 1 - - - - - 1.000 - - - family with sequence similarity 188, member B2
55. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - - 1.000 - -
56. BX901974.1 ENSDARG00000067592 2 1 - - - - - - 1.000 - -
57. slc7a10b ENSDARG00000051730 44 1 - - - - - 1.000 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
58. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
59. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
60. isg15 ENSDARG00000086374 8 1 - - - - - 1.000 - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
61. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
62. wdr27 ENSDARG00000053386 2 1 - - - - - 1.000 - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
63. mtus2 mtus2 22 1 - - - - - - 1.000 - -
64. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 1 - - - - - 1.000 - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
65. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
66. si:dkey-41e15.4 si:dkey-41e15.4 1 1 - - - - - - 1.000 - -
67. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
68. MMP20 MMP20 1 1 - - - - - - 1.000 - -
69. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1 - - - - - - 1.000 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
70. cga ENSDARG00000040479 3 1 - - - - - 1.000 - - - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
71. si:ch73-249k16.1 si:ch73-249k16.1 36 1 - - - - - 1.000 - - -
72. SIKE1 2 1 - - - - - - 1.000 - - suppressor of IKBKE 1, transcript variant X3
73. gabrr2b ENSDARG00000014057 9 1 - - - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
74. CECR6 25 1 - - - - - - 1.000 - - cat eye syndrome chromosome region, candidate 6
75. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - - 1.000 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
76. PLEKHS1_2 PLEKHS1_2 21 1 - - - - - - 1.000 - -
77. CABZ01002626.1 CABZ01002626.1 29 1 - - - - - - 1.000 - -
78. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - - 1.000 - - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
79. snx24 ENSDARG00000053527 31 1 - - - - - 1.000 - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
80. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - - - - - 1.000 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
81. si:dkey-58f10.11 ENSDARG00000094935 1 1 - - - - - - 1.000 - - si:dkey-58f10.11 [Source:ZFIN;Acc:ZDB-GENE-060526-313]
82. zgc:158260_1 ENSDARG00000101703 0 1 - - - - - 1.000 - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
83. CU041398.1 CU041398.1 17 1 - - - - - 1.000 - - -
84. si:ch211-220b11.4 si:ch211-220b11.4 8 1 - - - - - 1.000 - - -
85. mmrn2a ENSDARG00000076135 37 1 - - - - - - 1.000 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
86. CABZ01070637.1 CABZ01070637.1 1 1 - - - - - 1.000 - - -
87. SLC4A8 ENSDARG00000015531 16 1 - - - - - 1.000 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
88. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
89. SPDEF ENSDARG00000029930 60 1 - - - - - - 1.000 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
90. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1 - - - - - - 1.000 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
91. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - 1.000 - - - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
92. CU929052.1 CU929052.1 642 1 - - - - - - 1.000 - -
93. slc5a1 ENSDARG00000013871 4 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
94. ppp1r3db ENSDARG00000076248 32 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
95. dctn1a ENSDARG00000019743 45 1 - - - - - - 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
96. sh2d1aa ENSDARG00000095348 4 1 - - - - - - 1.000 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
97. BPHL ENSDARG00000102877 28 1 - - - - - 1.000 - - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
98. TMEM138 ENSDARG00000090543 105 1 - - - - - - 1.000 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
99. clcn2 clcn2 13 1 - - - - - 1.000 - - -
100. si:ch211-122l24.5 si:ch211-122l24.5 1 1 - - - - - - 1.000 - -

There are 1358 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA