Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:165453

Gene Name Gene ID Reads Annotation
zgc:165453 ENSDARG00000078183 3 zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]










Genes with expression patterns similar to zgc:165453

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:165453 ENSDARG00000078183 3 4 - - - 1.000 1.000 1.000 - 1.000 - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
2. cecr1b 2 2 - - - 1.000 - 1.000 - - - cat eye syndrome chromosome region, candidate 1b
3. si:dkey-176g4.5 si:dkey-176g4.5 4 1.977 - - - 0.977 - - - 1.000 -
4. zgc:92249 14 1.801 - - - - - 1.000 - 0.801 - zgc:92249
5. grn1 ENSDARG00000089362 20 1.75 - - - 0.910 - - - 0.840 - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
6. xkr8.1 ENSDARG00000004498 18 1.715 - - - 0.884 0.831 - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
7. AL929239.1 AL929239.1 54 1.546 - - - 0.796 - 0.750 - - -
8. rab11bb ENSDARG00000090086 43 1.445 - - - 0.722 - 0.723 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
9. si:ch211-207c6.7 si:ch211-207c6.7 8 1 - - - 1.000 - - - - -
10. mtp 1 1 - - - - 1.000 - - - - microsomal triglyceride transfer protein
11. si:ch211-207c7.6 si:ch211-207c7.6 23 1 - - - - - 1.000 - - -
12. si:ch211-245l1.1 si:ch211-245l1.1 1 1 - - - - - 1.000 - - -
13. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
14. dre-mir-221 ENSDARG00000091272 0 1 - - - - - - - 1.000 - dre-mir-221 [Source:miRBase;Acc:MI0001387]
15. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - - - - - 1.000 - - -
16. npy4r ENSDARG00000043341, ENSDARG00000113787 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
17. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -
18. rxfp3 ENSDARG00000057410, ENSDARG00000110516 1 1 - - - 1.000 - - - - - relaxin family peptide receptor 3 [Source:ZFIN;Acc:ZDB-GENE-080723-67]
19. si:ch211-285c6.4 ENSDARG00000095410 4 1 - - - - 1.000 - - - - si:ch211-285c6.4 [Source:ZFIN;Acc:ZDB-GENE-041001-97]
20. si:dkeyp-91h9.1 si:dkeyp-91h9.1 2 1 - - - 1.000 - - - - -
21. mbnl3 ENSDARG00000016085 6 1 - - - - 1.000 - - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
22. CR848787.1 CR848787.1 2 1 - - - - 1.000 - - - -
23. pdgfb pdgfb 5 1 - - - - 1.000 - - - -
24. BX927362.1 ENSDARG00000097469 13 1 - - - - - 1.000 - - -
25. zgc:136678 zgc:136678 2 1 - - - 1.000 - - - - -
26. si:ch211-139k8.3 si:ch211-139k8.3 1 1 - - - - 1.000 - - - -
27. barhl1b ENSDARG00000019013, ENSDARG00000113145 101 1 - - - - - 1.000 - - - BarH-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-060118-2]
28. cbln10 ENSDARG00000023157 17 1 - - - - 1.000 - - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
29. olfm3b ENSDARG00000039174 3 1 - - - 1.000 - - - - - olfactomedin 3b [Source:ZFIN;Acc:ZDB-GENE-070912-606]
30. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - - - - 1.000 - - -
31. fosl1a ENSDARG00000015355 139 1 - - - 1.000 - - - - - FOS-like antigen 1a [Source:ZFIN;Acc:ZDB-GENE-061207-7]
32. rgs13 ENSDARG00000017653 8 1 - - - 1.000 - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
33. ccdc78 ENSDARG00000030095 8 1 - - - 1.000 - - - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
34. ncanb ENSDARG00000005783 22 1 - - - - - 1.000 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
35. uprt ENSDARG00000035549, ENSDARG00000110518 2 1 - - - - 1.000 - - - - uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2411]
36. PDE5A PDE5A 8 1 - - - 1.000 - - - - -
37. CR388129.1 ENSDARG00000097173 89 1 - - - - - 1.000 - - -
38. grin2ca ENSDARG00000078149 13 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
39. si:dkey-4c15.6 si:dkey-4c15.6 6 1 - - - - - 1.000 - - -
40. si:ch211-223f3.1 si:ch211-223f3.1 0 1 - - - - - - - 1.000 -
41. zgc:113263 ENSDARG00000045842 51 1 - - - - - 1.000 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
42. eva1c ENSDARG00000056024 1 1 - - - - 1.000 - - - - eva-1 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-091204-329]
43. si:dkey-188k17.2 7 1 - - - - - - - 1.000 - si:dkey-188k17.2
44. CR385046.7 CR385046.7 1 1 - - - - 1.000 - - - -
45. si:ch211-274p24.3 si:ch211-274p24.3 72 1 - - - - - 1.000 - - -
46. BX248324.1 ENSDARG00000096489 3 1 - - - - - 1.000 - - -
47. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1 - - - - - 1.000 - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
48. rbp1b rbp1b 36 1 - - - - - 1.000 - - -
49. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
50. hsd17b7_1 ENSDARG00000088140 36 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
51. GPR116 GPR116 1 1 - - - 1.000 - - - - -
52. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - - - - - 1.000 -
53. CABZ01009626.1 CABZ01009626.1 2 1 - - - - - 1.000 - - -
54. RBBP6_11 RBBP6_11 6 1 - - - - 1.000 - - - -
55. iqsec3b ENSDARG00000093091 10 1 - - - - 1.000 - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
56. FAM120B ENSDARG00000030804 1 1 - - - - - 1.000 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
57. HIST1H4J HIST1H4J 31 1 - - - - - 1.000 - - -
58. si:ch211-253h3.2 si:ch211-253h3.2 1 1 - - - 1.000 - - - - -
59. trim9 ENSDARG00000039123 53 1 - - - - - 1.000 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
60. syt9b ENSDARG00000029239 31 1 - - - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
61. GTF3A GTF3A 6 1 - - - - - - - 1.000 -
62. plekhs1 ENSDARG00000079227 4 1 - - - 1.000 - - - - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
63. BX004993.1 BX004993.1 1 1 - - - - 1.000 - - - -
64. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
65. CLNK 8 1 - - - 1.000 - - - - - cytokine dependent hematopoietic cell linker
66. THEG ENSDARG00000078644 121 1 - - - - 1.000 - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
67. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - - - - - - 1.000 -
68. BX088603.2 ENSDARG00000099595 2 1 - - - 1.000 - - - - -
69. chrm2a ENSDARG00000098612 5 1 - - - - - 1.000 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
70. si:dkey-161p7.6 si:dkey-161p7.6 0 1 - - - - - - - 1.000 -
71. si:ch211-53m15.2 ENSDARG00000094928 1 1 - - - - 1.000 - - - - si:ch211-53m15.2 [Source:ZFIN;Acc:ZDB-GENE-100922-24]
72. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
73. CABZ01073654.1 CABZ01073654.1 16 1 - - - - - 1.000 - - -
74. BX511266.1 BX511266.1 21 1 - - - - - 1.000 - - -
75. pex11b ENSDARG00000069147 1 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 11 beta [Source:ZFIN;Acc:ZDB-GENE-060825-289]
76. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - 1.000 - - - -
77. RBBP6_3 RBBP6_3 34 1 - - - - - - - 1.000 -
78. CYP2W1 CYP2W1 5 1 - - - 1.000 - - - - -
79. pygo1 ENSDARG00000098687 4 1 - - - - - 1.000 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
80. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - - 1.000 - - - - -
81. ninj2 ENSDARG00000079824 1 1 - - - - 1.000 - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
82. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - - 1.000 - - -
83. fgf11b ENSDARG00000043907 16 1 - - - - - 1.000 - - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
84. FLVCR2 FLVCR2 5 1 - - - - - - - 1.000 -
85. LAMA3 ENSDARG00000071462 5 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
86. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 1 - - - - - 1.000 - - - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
87. si:dkey-28d5.13 ENSDARG00000077260 3 1 - - - 1.000 - - - - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
88. SPTBN4 ENSDARG00000092624 6 1 - - - - 1.000 - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
89. PRKCA_1 ENSDARG00000099841 12 1 - - - - - 1.000 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
90. allc ENSDARG00000042562 12 1 - - - - 1.000 - - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
91. MYADM_1 ENSDARG00000086815 1 1 - - - - 1.000 - - - - myeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]
92. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - - - - 1.000 - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
93. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
94. dolk ENSDARG00000076991 7 1 - - - - 1.000 - - - - dolichol kinase [Source:ZFIN;Acc:ZDB-GENE-070410-59]
95. CABZ01055343.1 CABZ01055343.1 12 1 - - - - 1.000 - - - -
96. CABZ01076351.1 CABZ01076351.1 1 1 - - - 1.000 - - - - -
97. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - 1.000 - - -
98. ftr19_1 ENSDARG00000094131 1 1 - - - - 1.000 - - - - finTRIM family, member 19 [Source:ZFIN;Acc:ZDB-GENE-090506-5]
99. CR381630.1 CR381630.1 23 1 - - - - - 1.000 - - -
100. dyrk1aa ENSDARG00000063570 14 1 - - - - 1.000 - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a [Source:ZFIN;Acc:ZDB-GENE-050302-29]

There are 552 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA