Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:165409_1

Gene Name Gene ID Reads Annotation
zgc:165409_1 ENSDARG00000091385 65 zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]










Genes with expression patterns similar to zgc:165409_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:165409_1 ENSDARG00000091385 65 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
2. GABRA3 ENSDARG00000090883 5 2 1.000 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
3. si:ch211-120c15.1 si:ch211-120c15.1 20 1.987 - 1.000 - - - - 0.987 - -
4. CU457778.1 ENSDARG00000098976 38 1.987 - 1.000 - - - - 0.987 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
5. n6amt2 7 1.987 - 1.000 - - - - 0.987 - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
6. HYKK_1 HYKK_1 4 1.987 - 1.000 - - - - 0.987 - -
7. nid2b ENSDARG00000009471 4 1.987 - 1.000 - - - - 0.987 - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
8. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1.987 1.000 - - - - - 0.987 - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
9. fermt3a fermt3a 56 1.959 - 1.000 - - - - 0.959 - -
10. slc1a9 ENSDARG00000098269 12 1.95 - 1.000 - - - - 0.950 - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
11. lyve1a ENSDARG00000075833 25 1.949 1.000 - - - - - 0.949 - - lymphatic vessel endothelial hyaluronic receptor 1a [Source:ZFIN;Acc:ZDB-GENE-031118-138]
12. dmrt1 ENSDARG00000007349 16 1.917 - 1.000 - - - - 0.917 - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
13. mettl25 ENSDARG00000045754 36 1.902 - 1.000 - - - - 0.902 - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
14. fam43b ENSDARG00000070222 92 1.877 0.877 1.000 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
15. snapc1a ENSDARG00000029569 25 1.868 1.000 - - - 0.868 - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
16. FP236851.1 FP236851.1 10 1.868 - 1.000 - 0.868 - - - - -
17. mcm5_1 ENSDARG00000019507 10 1.865 - 1.000 - - 0.865 - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
18. si:ch211-57m13.9 ENSDARG00000095884 10 1.839 0.839 1.000 - - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
19. LYPLAL1 ENSDARG00000088764 87 1.822 - 0.865 - - - - 0.957 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
20. esr1 ENSDARG00000004111, ENSDARG00000112357 19 1.821 - - - 0.868 - - 0.953 - - estrogen receptor 1 [Source:ZFIN;Acc:ZDB-GENE-020806-5]
21. WDPCP ENSDARG00000074590 35 1.817 1.000 - - - - - 0.817 - - WD repeat containing planar cell polarity effector [Source:ZFIN;Acc:ZDB-GENE-100405-4]
22. AL935272.2 AL935272.2 37 1.804 1.000 - - - 0.804 - - - -
23. adrb3b ENSDARG00000052919 16 1.8 - - - - 0.813 - 0.987 - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
24. hspbap1 ENSDARG00000033771 41 1.77 - - - - 0.826 - 0.944 - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
25. rad21b ENSDARG00000035655 87 1.757 0.819 - - - - - 0.938 - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
26. cacng8b ENSDARG00000070626 176 1.744 0.950 0.794 - - - - - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
27. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1.74 - 1.000 - - - - 0.740 - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
28. pdcl ENSDARG00000009480 12 1.734 1.000 0.734 - - - - - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
29. CU915778.2 CU915778.2 194 1.732 - 0.880 - - - - 0.852 - -
30. lrp2bp ENSDARG00000040478 21 1.698 0.711 - - - - - 0.987 - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
31. si:ch211-57i17.2 ENSDARG00000093354 58 1.69 - - - - - 0.817 0.873 - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
32. fat3a ENSDARG00000033840 902 1.672 0.792 0.880 - - - - - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
33. bokb ENSDARG00000008807 29 1.672 - - - - 0.827 - 0.845 - - BOK, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-040426-1346]
34. slc7a10b ENSDARG00000051730 44 1.662 0.730 - - - - - 0.932 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
35. xkr7 ENSDARG00000026333 18 1.656 0.781 0.875 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
36. RFESD ENSDARG00000058725 27 1.651 - 0.840 - 0.811 - - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
37. dock4b ENSDARG00000024874 32 1.649 0.781 - - 0.868 - - - - - dedicator of cytokinesis 4b [Source:ZFIN;Acc:ZDB-GENE-060130-74]
38. si:dkey-14d8.9 si:dkey-14d8.9 66 1.644 - 0.771 - - - - 0.873 - -
39. nhlh2 ENSDARG00000025495 1860 1.634 0.805 0.829 - - - - - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
40. socs9 ENSDARG00000101985 44 1.629 - - - - 0.724 - 0.905 - - suppressor of cytokine signaling 9 [Source:ZFIN;Acc:ZDB-GENE-030131-4065]
41. FAM120A ENSDARG00000075021 73 1.628 - 0.726 - - - - 0.902 - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
42. si:ch211-207c6.6 si:ch211-207c6.6 32 1.603 - - - - - 0.786 0.817 - -
43. CABZ01041804.1 CABZ01041804.1 312 1.595 - 0.880 - - 0.715 - - - -
44. camk1db ENSDARG00000017446 47 1.592 0.887 - - - - 0.705 - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
45. gpr63 ENSDARG00000074540 242 1.544 - - - - - 0.742 0.802 - - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]
46. mettl13 ENSDARG00000010905 168 1.534 - - - - 0.821 0.713 - - - methyltransferase like 13 [Source:ZFIN;Acc:ZDB-GENE-060929-60]
47. irx5b ENSDARG00000074070 459 1.446 0.720 0.726 - - - - - - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
48. srgap2b srgap2b 80 1.437 0.730 - - 0.707 - - - - -
49. ncanb ENSDARG00000005783 22 1 1.000 - - - - - - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
50. swsap1 ENSDARG00000093423 14 1 - 1.000 - - - - - - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
51. SAMHD1 ENSDARG00000071288 0 1 - 1.000 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
52. FBXO40_1 FBXO40_1 59 1 - 1.000 - - - - - - -
53. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
54. nmrk1 ENSDARG00000037913 18 1 - 1.000 - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
55. zgc:66455 ENSDARG00000052375 3 1 - 1.000 - - - - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
56. igsf5 igsf5 85 1 - 1.000 - - - - - - -
57. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 - 1.000 - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
58. zfp64 ENSDARG00000061147 44 1 1.000 - - - - - - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
59. CU896645.1 CU896645.1 10 1 1.000 - - - - - - - -
60. ndrg1b ENSDARG00000010420 116 1 1.000 - - - - - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
61. ptpn6_1 ENSDARG00000089043 22 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
62. gabrr2a ENSDARG00000052982 21 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
63. cdk5r1a ENSDARG00000037916 46 1 - 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
64. gpc2 ENSDARG00000104217 10 1 - 1.000 - - - - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
65. si:dkey-238o14.1 ENSDARG00000100099 1 1 1.000 - - - - - - - - si:dkey-238o14.1 [Source:ZFIN;Acc:ZDB-GENE-081103-10]
66. ZNF135_5 ZNF135_5 73 1 - - - - - - 1.000 - -
67. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
68. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
69. CU467888.1 CU467888.1 30 1 - 1.000 - - - - - - -
70. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
71. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
72. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
73. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
74. BX248120.1 BX248120.1 4 1 1.000 - - - - - - - -
75. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
76. dclre1a ENSDARG00000091768 94 1 - 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
77. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
78. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
79. BSN_1 BSN_1 21 1 1.000 - - - - - - - -
80. sez6l ENSDARG00000100594 35 1 - 1.000 - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
81. HIST2H4B HIST2H4B 9 1 1.000 - - - - - - - -
82. efr3ba ENSDARG00000033516 19 1 1.000 - - - - - - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
83. CLTCL1_1 CLTCL1_1 1 1 1.000 - - - - - - - -
84. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
85. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - 1.000 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
86. ninj2 ENSDARG00000079824 1 1 - 1.000 - - - - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
87. slc15a1a ENSDARG00000100315 23 1 - 1.000 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
88. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
89. kcna1 kcna1 174 1 - 1.000 - - - - - - -
90. CT583709.2 CT583709.2 55 1 1.000 - - - - - - - -
91. kcnh1a ENSDARG00000024167 9 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
92. zgc:174710 13 1 1.000 - - - - - - - - zgc:174710
93. si:dkeyp-10a3.2 18 1 - 1.000 - - - - - - - si:dkeyp-10a3.2
94. si:dkey-81p22.11 ENSDARG00000093797 68 1 - 1.000 - - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
95. DOCK4 DOCK4 78 1 - 1.000 - - - - - - -
96. CABZ01069020.1 ENSDARG00000105806 19 1 1.000 - - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
97. KCNIP4 ENSDARG00000088100 86 1 1.000 - - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
98. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
99. thbs2a ENSDARG00000060410 0 1 - 1.000 - - - - - - - thrombospondin 2a [Source:ZFIN;Acc:ZDB-GENE-020708-2]
100. fez1 ENSDARG00000023174 701 1 - 1.000 - - - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]

There are 1178 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA