Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:113348

Gene Name Gene ID Reads Annotation
zgc:113348 ENSDARG00000103795 1351 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]










Genes with expression patterns similar to zgc:113348

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:113348 ENSDARG00000103795 1351 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
2. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 3.214 - - 0.939 - - 0.729 0.701 - 0.845 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
3. phf10 ENSDARG00000070084 1210 2.68 - - 0.978 - - 0.763 - - 0.939 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
4. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 2.664 - 0.733 0.986 - - - - - 0.945 RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
5. CABZ01087568.1 CABZ01087568.1 1487 2.595 - 0.707 0.983 - - - - - 0.905
6. cpsf1 ENSDARG00000034178 2036 2.58 - - 0.973 - - 0.708 - - 0.899 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
7. ndc80 ENSDARG00000071694 1162 2.518 0.707 - 0.974 - - - 0.837 - - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
8. st8sia5 ENSDARG00000036584 529 2.516 - 0.806 - - - 0.746 - - 0.964 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
9. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 2.455 - - 0.985 - - 0.718 - 0.752 - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
10. prkcda ENSDARG00000009208 1508 2.441 - 0.710 0.972 0.759 - - - - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
11. nadl1.2 695 2.417 - 0.806 - - - 0.724 - - 0.887 neural adhesion molecule L1.2, transcript variant X1
12. rheb ENSDARG00000090213 1432 2.391 - 0.801 - - - - 0.793 - 0.797 Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
13. setdb1b ENSDARG00000099021 2937 2.379 - - 0.955 - - 0.703 0.721 - - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
14. kdm5c ENSDARG00000006124 4389 2.37 - - 0.868 - - 0.787 - - 0.715 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
15. C7H4orf48 C7H4orf48 1455 2.368 - 0.835 - - - 0.750 0.783 - -
16. CT990561.1 ENSDARG00000058284 566 2.367 - 0.712 0.953 - - 0.702 - - - EPH receptor A5 [Source:NCBI gene;Acc:797595]
17. her15.2 her15.2 1701 2.35 - - - - - 0.777 0.747 - 0.826
18. clvs2 ENSDARG00000053122 1390 2.341 - 0.825 - - - - 0.702 0.814 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
19. CHD1 ENSDARG00000103787 1645 2.326 - - - - - 0.721 - 0.717 0.888 chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
20. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.296 - - - - - - 0.737 0.830 0.729 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
21. atp6ap1a ENSDARG00000041417 898 2.275 - 0.778 - - - 0.724 0.773 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
22. ADAM22 ENSDARG00000060532 2259 2.274 - - - - - 0.717 0.764 0.793 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
23. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.272 - 0.738 - - - - 0.750 0.784 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
24. SLC5A6 SLC5A6 179 2.269 0.764 0.799 - - 0.706 - - - -
25. DTX4 ENSDARG00000076302 2642 2.257 - - - - - 0.724 0.779 0.754 - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
26. st18 663 2.241 - - - - - 0.741 0.724 0.776 - suppression of tumorigenicity 18, zinc finger
27. dnajc6 ENSDARG00000079891 438 2.233 - - - - - 0.774 0.709 0.750 - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
28. CABZ01051991.1 CABZ01051991.1 346 2.227 - - - - - 0.741 0.732 0.754 -
29. sept5b ENSDARG00000036031 188 2.218 - - - - - 0.732 0.784 0.702 - septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
30. RLTPR 1158 2.17 0.723 - - - - - 0.731 0.716 - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
31. stmn1b ENSDARG00000033655 9491 2.164 - - - - - 0.719 0.742 - 0.703 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
32. cnrip1a ENSDARG00000091683 1491 2.156 - - - - - 0.712 0.708 0.736 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
33. HDX ENSDARG00000079382 513 1.941 - - 0.988 - - - - - 0.953 highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
34. smg6 ENSDARG00000100481 493 1.939 - - 0.986 - - - - - 0.953 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
35. rnf121 ENSDARG00000060282 1809 1.918 - - 0.946 - - - - - 0.972 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
36. ubl3b ENSDARG00000021556 1210 1.905 - - 0.987 - - - - - 0.918 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
37. eya3 ENSDARG00000036100 1965 1.903 - - 0.972 - - - - - 0.931 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
38. BX323045.3 BX323045.3 1044 1.863 - - 0.988 - - - 0.875 - -
39. DLC1 ENSDARG00000079317 2149 1.84 - - 0.977 - - - - - 0.863 DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
40. cenpk ENSDARG00000039616 744 1.838 - 0.869 - - - - - - 0.969 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
41. exoc6 ENSDARG00000020521 1533 1.836 - - 0.972 - - 0.864 - - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]
42. ftsjd2 ftsjd2 2694 1.829 - - 0.964 - - - - - 0.865
43. zfyve9a ENSDARG00000101903 437 1.826 - 0.884 - - - - - - 0.942 zinc finger, FYVE domain containing 9a [Source:ZFIN;Acc:ZDB-GENE-070705-182]
44. CEP152 ENSDARG00000075725 391 1.794 - 0.841 - - - - - - 0.953 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
45. ZNF462 ENSDARG00000112909 1132 1.758 - - - - - 0.824 - - 0.934 zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
46. CABZ01068153.1 CABZ01068153.1 211 1.757 - 0.767 0.990 - - - - - -
47. tmem2 2572 1.757 - - 0.971 - - - - - 0.786 transmembrane protein 2, transcript variant X1
48. cars ENSDARG00000036164 2019 1.738 - - 0.948 - - - - - 0.790 cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
49. rbm39b ENSDARG00000041853 1421 1.738 - - 0.989 - - - 0.749 - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
50. tmem59l ENSDARG00000003655 1536 1.731 - - - - - - 0.768 - 0.963 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
51. st8sia2 ENSDARG00000018788 2183 1.728 - - - - - - 0.787 - 0.941 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
52. NHS NHS 409 1.724 - - - - - - 0.770 - 0.954
53. hic1l ENSDARG00000045660 1489 1.722 0.791 - - - - - - - 0.931 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
54. TUSC3 ENSDARG00000078854 1021 1.72 - - 0.987 - - - 0.733 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
55. mafg2 mafg2 1041 1.717 - - - - - 0.767 - - 0.950
56. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.716 - - 0.951 - - - - - 0.765 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
57. supt16h ENSDARG00000079949 4755 1.715 - - - - - - 0.767 - 0.948 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
58. dnajc5aa ENSDARG00000042948 2885 1.714 - - 0.955 - - - 0.759 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
59. agpat3 ENSDARG00000036549 1093 1.713 0.732 - 0.981 - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
60. nupl2 ENSDARG00000029043 105 1.71 - - - - - - 0.757 - 0.953 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
61. rapgef2 ENSDARG00000005482 2586 1.71 - - 0.980 - - - 0.730 - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
62. caly ENSDARG00000036008 1002 1.71 - - - - - 0.780 - - 0.930 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
63. rexo1 ENSDARG00000026986 770 1.709 - - 0.991 - - - 0.718 - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
64. tnfaip3 ENSDARG00000027777 1066 1.705 - - 0.989 - - 0.716 - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
65. phc2b_1 ENSDARG00000013224 1316 1.704 - - - - - 0.782 - - 0.922 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
66. pdlim5a ENSDARG00000101777 357 1.702 - - - - - 0.762 - - 0.940 PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
67. ssbp4 ENSDARG00000056483 10196 1.7 - - 0.923 - - - - 0.777 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
68. mrpl37 ENSDARG00000062916 1600 1.697 - - 0.978 0.719 - - - - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
69. papss1 ENSDARG00000057099 809 1.696 - - - - - - - 0.745 0.951 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
70. MSL1_1 MSL1_1 2365 1.696 - - 0.961 - - 0.735 - - -
71. brms1lb ENSDARG00000018047 453 1.689 - - - - - - 0.733 - 0.956 BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
72. ptn ENSDARG00000102340 229 1.688 - - - - - - - 0.730 0.958 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
73. rnd1l rnd1l 984 1.684 - - 0.965 - - 0.719 - - -
74. rusc1 ENSDARG00000078125 617 1.682 - - - - - - 0.748 - 0.934 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
75. ptges3b_1 ENSDARG00000089626 1670 1.682 - - - - - 0.740 - - 0.942 prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
76. prpf4ba ENSDARG00000008784 936 1.68 - - - - - - - 0.758 0.922 pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
77. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.678 - - - - - - 0.730 - 0.948 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
78. thsd7ba ENSDARG00000095022 231 1.674 - - - - - 0.718 - - 0.956 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
79. olig2 ENSDARG00000040946 1405 1.673 - - - - - - 0.730 - 0.943 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
80. ptprk ENSDARG00000063416 742 1.672 - - - - - 0.706 - - 0.966 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
81. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.671 - - - - - - 0.754 - 0.917 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
82. daxx ENSDARG00000000729 734 1.671 - - - - - 0.702 - - 0.969 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
83. irx5a ENSDARG00000034043 1694 1.67 - - - - - 0.751 - - 0.919 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
84. stxbp1a ENSDARG00000001994 5154 1.668 - - 0.951 - - 0.717 - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
85. hes6 ENSDARG00000019335 4754 1.665 - - 0.940 - - 0.725 - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
86. nrxn3b ENSDARG00000062693 192 1.663 - - - - - - 0.711 - 0.952 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
87. sema4ab ENSDARG00000062352 409 1.661 - - - - - - - 0.702 0.959 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
88. pdzrn3b ENSDARG00000073869 1566 1.654 - - - - - - 0.714 - 0.940 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
89. gad1b ENSDARG00000027419 440 1.648 - - - - - - 0.703 - 0.945 glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
90. dut ENSDARG00000106529 3120 1.647 - - 0.920 - - - - - 0.727 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
91. SPIN4_1 SPIN4_1 2562 1.646 - - - - - - - 0.751 0.895
92. pou3f3a ENSDARG00000042032 2835 1.639 - - 0.928 - - - 0.711 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
93. fat1 fat1 3934 1.636 - - 0.909 - - - 0.727 - -
94. als2b ENSDARG00000076924 738 1.635 - 0.704 - - - - - - 0.931 amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
95. nes ENSDARG00000088805 2710 1.632 - - 0.890 - - - 0.742 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
96. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.626 - - - - - - 0.775 0.851 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
97. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.623 - - - - - 0.746 - - 0.877 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
98. RBM6 ENSDARG00000077060 3521 1.615 - - - - - 0.757 - - 0.858 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
99. nr2f1a ENSDARG00000052695 5037 1.614 - - 0.862 - - 0.752 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
100. ssb ENSDARG00000029252 3394 1.607 0.774 - - - - - - - 0.833 Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]

There are 2101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA